FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.341e-53
Identity = 106/225 (47.11%), Postives = 153/225 (68.00%), Query Frame = 3
Query:  129 QLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            QL   K F+  EL   T+ FS+ N +G GG+G+VYKG L +G+++A+KR ++    G   +F+TE++++S   H+N++ L GFC    E++LVY Y+ NGS+   L  +      LDW  R KIALGS +GL+YLHE  DP IIHRDVK+ NILLDE   A V DFGL+KL+ D +  H+TT V GT+G++ PEY  T + +EK+DV+G+G+++LEL+TG+   D
Sbjct:  615 QLMGTKAFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGA-FEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGV--KLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPID 836          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.341e-53
Identity = 107/221 (48.42%), Postives = 146/221 (66.06%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDP 803
            L +  L ++  ATD FS KNI+G GGFG VYK  L   K VAVK+L E +T G   +F  E++ +    H NL+ L G+C+   EKLLVY YM NGS+   LR +   L  LDW  R KIA+G+ARGL++LH    P IIHRD+KA+NILLD +FE  V DFGLA+L+   ++H++T + GT G+I PEY  + R++ K DV+ +G++LLEL+TG+    P
Sbjct:  902 LLKVRLGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNR-EFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGP 1121          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 5.096e-53
Identity = 98/223 (43.95%), Postives = 150/223 (67.26%), Query Frame = 3
Query:  132 LGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            LG  + ++LREL+ AT+G   +N++G GG+G VY+G L DG  VAVK L   R    E +F+ EV++I    H+NL+ L G+C     ++LVY ++ NG++   +      + PL W  R  I LG A+GL+YLHE  +PK++HRD+K++NILLD ++ A V DFGLAKL+  + +++TT V GT G++APEY  TG  +EK+D++ +GI+++E+ITG+   D
Sbjct:  136 LGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQA-EKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVD 357          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.655e-53
Identity = 103/221 (46.61%), Postives = 150/221 (67.87%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHIT-TAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            L++ +  +L  AT+GF N +++G GGFG VYK  L DG  VA+K+L    +  G+ +F  E++ I    HRNL+ L G+C    E+LLVY +M  GS+   L + + +   L+W TR+KIA+GSARGL++LH +C P IIHRD+K++N+LLDE  EA V DFG+A+LM   DTH++ + + GT G++ PEY  + R S K DV+ YG++LLEL+TG+R  D
Sbjct:  868 LRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHV-SGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD 1087          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.483e-52
Identity = 104/216 (48.15%), Postives = 146/216 (67.59%), Query Frame = 3
Query:  153 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            SL ++  +T  F+  NI+G GGFG VYK  L DG  VA+KRL  + T   + +FQ EV+ +S A H NL+ L G+C    +KLL+Y YM NGS+   L E+    P LDW TR +IA G+A GL+YLH+ C+P I+HRD+K++NILL + F A + DFGLA+L+   DTH+TT + GT+G+I PEY     ++ K DV+ +G++LLEL+TG+R  D
Sbjct:  732 SLDDILKSTSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSGD-TGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMD 946          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.483e-52
Identity = 104/224 (46.43%), Postives = 154/224 (68.75%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPP--LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHIT-TAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDP 803
            L++ +   L  AT+GFS + ++G GGFG+VYK +L DG +VA+K+L    T  G+ +F  E++ I    HRNL+ L G+C    E+LLVY YM  GS+ + L E+ S      L+W  RKKIA+G+ARGL++LH  C P IIHRD+K++N+LLDE+FEA V DFG+A+L+   DTH++ + + GT G++ PEY  + R + K DV+ YG++LLEL++G++  DP
Sbjct:  844 LRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRI-TGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDP 1066          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.529e-52
Identity = 99/217 (45.62%), Postives = 148/217 (68.20%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            F+LR+L++AT+ F+  N+LG GG+G VY+G+L +G  VAVK+L        E +F+ EV+ I    H+NL+ L G+C     ++LVY Y+ +G++   L         L W  R KI  G+A+ L+YLHE  +PK++HRD+KA+NIL+D+EF A + DFGLAKL+D  ++HITT V GT G++APEY +TG  +EK+D++ +G++LLE ITG+   D
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNN-LGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVD 386          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.529e-52
Identity = 106/216 (49.07%), Postives = 147/216 (68.06%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            K  S+ EL  +T+ FS  NI+G GGFG VYK    DG   AVKRL  +     E +FQ EV+ +S A H+NL+ L G+C    ++LL+Y +M NGS+   L ER      L W  R KIA G+ARGL+YLH+ C+P +IHRDVK++NILLDE+FEA + DFGLA+L+   DTH+TT + GT+G+I PEY  +  ++ + DV+ +G++LLEL+TG+R
Sbjct:  740 KDLSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGD-CGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRR 954          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.314e-52
Identity = 103/223 (46.19%), Postives = 153/223 (68.61%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPP-LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHIT-TAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDP 803
            L++ +   L  AT+GFS  +++G GGFG VYK +LADG +VA+K+L +  T  G+ +F  E++ I    HRNL+ L G+C    E+LLVY YM  GS+ + L E+       LDW  RKKIA+G+ARGL++LH  C P IIHRD+K++N+LLD++F A V DFG+A+L+   DTH++ + + GT G++ PEY  + R + K DV+ YG++LLEL++G++  DP
Sbjct:  843 LRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQV-TGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDP 1064          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.652e-51
Identity = 109/231 (47.19%), Postives = 153/231 (66.23%), Query Frame = 3
Query:  117 DSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVT-----EKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            DS  +   L +FS  E++ AT+ FS  NI+GRGG+G V+KG L DG  VA KR K   ++GG+  F  EV++I+   H NLL L G+CT  T     ++++V   ++NGS+   L     +   L WP R++IALG ARGL+YLH    P IIHRD+KA+NILLDE FEA V DFGLAK      TH++T V GT+G++APEY   G+ +EK+DV+ +G++LLEL++ ++A
Sbjct:  260 DSMSESTTLVKFSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKN-CSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEA--QLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKA 487          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5977_ARATH1.341e-5347.11Probable leucine-rich repeat receptor-like protein... [more]
EXS_ARATH1.341e-5348.42Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y1154_ARATH5.096e-5343.95Probable serine/threonine-protein kinase At1g01540... [more]
BRI1_ARATH6.655e-5346.61Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
PSKR1_DAUCA1.483e-5248.15Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
BRL1_ARATH1.483e-5246.43Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y2296_ARATH2.529e-5245.62Probable receptor-like protein kinase At2g42960 OS... [more]
PSKR2_ARATH2.529e-5249.07Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
BRL3_ARATH4.314e-5246.19Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
RKF3_ARATH3.652e-5147.19Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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