FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.146e-43
Identity = 102/231 (44.16%), Postives = 140/231 (60.61%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKR----LKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLR-----ERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-----MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            + FS  EL  AT  FS +N +G G FG VY+G+L DG+ VA+KR     K ++    E  F +E+  +S   H++L+ L G+C    EKLLVY YM NG++   L      E+ SSL    W  R KIAL +ARG+ YLH +  P IIHRD+K++NILLD  + A V DFGL+ +      D+      T   GTVG+I PEY S    ++K+DV+G G++LLEL+TG+RA
Sbjct:  482 EEFSFSELASATGNFSLENKIGSGSFGVVYRGKLNDGREVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLHDKNNVEKHSSLIN-SWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWVARVSDFGLSLMGPVLGKDHNPYQRPTKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELLTGKRA 711          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.803e-43
Identity = 92/220 (41.82%), Postives = 138/220 (62.73%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            K+F+  E+   T+ F  + ILG+GGFG VY G +   + VAVK L      G + QF+ EV+++    H+NL+GL G+C    +  L+Y YMANG +   +  ++     L+W TR KIAL +A+GL YLH  C P ++HRDVK  NILL+E F+  + DFGL++    + +TH++T V GT+G++ PEY  T   +EK+DV+ +G++LL +IT Q   D
Sbjct:  565 KKFTYAEVLTMTNNF--QKILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYK-QFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGG-SILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVID 780          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.803e-43
Identity = 94/233 (40.34%), Postives = 139/233 (59.66%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            P++      +   + ++  E+ V T+ F     LG GGFG VY G + D + VAVK L E    G + QF+ EV ++    H NL+ L G+C      +L+Y YM+NG++   L   ++S  PL W  R +IA  +A+GL YLH  C P +IHRD+K+ NILLD  F+A +GDFGL++      +TH++T V G+ G++ PEY  T   +EK+DVF +G++LLE+IT Q   D
Sbjct:  566 PSKASRSSMVANKRSYTYEEVAVITNNFERP--LGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYK-QFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHL-SGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVID 794          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.803e-43
Identity = 90/212 (42.45%), Postives = 141/212 (66.51%), Query Frame = 3
Query:  189 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-----FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH--ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDP 803
            +++N++G+G  G VYK  + +G +VAVK+L + + +  E +     F  E++I+    HRN++ L G+C+  + KLL+Y Y  NG++   L+  ++    LDW TR KIA+G+A+GL+YLH  C P I+HRDVK  NILLD ++EA++ DFGLAKLM     +    + V G+ G+IAPEY  T   +EK+DV+ YG++LLE+++G+ A +P
Sbjct:  773 TDENVIGKGCSGIVYKAEIPNGDIVAVKKLWKTKDNNEEGESTIDSFAAEIQILGNIRHRNIVKLLGYCSNKSVKLLLYNYFPNGNLQQLLQGNRN----LDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVEP 980          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.803e-43
Identity = 91/215 (42.33%), Postives = 131/215 (60.93%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            K FS  EL+ ATD F+   +LG+GG G VYKG L DG++VAVKR K       E +F  EV +++   HRN++ L G C      +LVY ++ NG +  RLR+       + W  R  IA+  A  LSYLH      I HRD+K  NILLDE+++  V DFG ++ +    TH+TT V GT G++ PEY  + + ++K+DV+ +G++L+ELITG+
Sbjct:  410 KIFSSNELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAMDEDKVE-EFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYI-MTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGK 622          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.780e-43
Identity = 91/217 (41.94%), Postives = 130/217 (59.91%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLK---EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            FS  EL+ ATD F+   +LG+GG G VYKG L DG++VAVKR K   E+R      +F  EV +++   HRN++ L G C      +LVY ++ NG +  RL +       + W  R  IA+  A  LSYLH      I HRD+K  NILLDE   A V DFG ++ +    TH+TT V GT G++ PEY  + + +EK+DV+ +G++L+EL+TG++
Sbjct:  404 FSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAVDEDRVE----EFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYT-MTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEK 615          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.780e-43
Identity = 91/216 (42.13%), Postives = 131/216 (60.65%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            K FS +EL+ ATD FS   +LG+GG G VYKG L DG +VAVKR K       E +F  E+ ++S   HRN++ L G C      +LVY Y+ NG +  RL +       + W  R +IA+  A  L+Y+H      I HRD+K  NILLDE++ A V DFG ++ +    TH+TT V GT G++ PEY  + + + K+DV+ +G++L+ELITG++
Sbjct:  415 KIFSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVKRSKVVDEDKME-EFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYT-MTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEK 628          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 4.780e-43
Identity = 90/216 (41.67%), Postives = 138/216 (63.89%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITT-AVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +FS + ++ ATD FS+ N++GRGGFG+VY+G+L+ G  VAVKRL +    G E +F+ E  ++S   H+NL+ L GFC    EK+LVY ++ N S+   L +  +    LDW  R  I  G ARG+ YLH+     IIHRD+KA+NILLD +    + DFG+A++     +   T  + GT G+++PEY   G  S K+DV+ +G+++LE+I+G++
Sbjct:  332 QFSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAE-EFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFD-PAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKK 545          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.780e-43
Identity = 96/217 (44.24%), Postives = 138/217 (63.59%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT--HITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +F    LQ AT  FS +N LG GGFG VYKG L+DG+ +AVKRL +    G E +F+ E  +++   HRNL+ L G+    TE+LLVY ++ + S+   + +       L+W  R KI  G ARGL YLH+    +IIHRD+KA+NILLDEE    + DFG+A+L D   T    T  + GT G++APEY+  G+ S KTDV+ +G+++LE+I+G++
Sbjct:  331 KFDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQG-ETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQG-NELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKK 545          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 4.780e-43
Identity = 94/217 (43.32%), Postives = 143/217 (65.90%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +F L+ ++ AT  FS +N LG+GGFG+VYKG L +G  +AVKRL   +TSG GE++F+ EV +++   H NL+ L GF     EKLLVY +++N S+   L +  +    LDW  R+ I  G  RG+ YLH+    KIIHRD+KA+NILLD +    + DFG+A++     T   T  V GT G+++PEY++ G+ S K+DV+ +G+++LE+I+G++
Sbjct:  326 QFDLKTIESATSNFSERNKLGKGGFGEVYKGMLMNGTEIAVKRLS--KTSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVSNKSLDYFLFD-PTKRNQLDWTMRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKK 539          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ACCR3_ARATH2.146e-4344.16Putative serine/threonine-protein kinase-like prot... [more]
Y5181_ARATH2.803e-4341.82Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH2.803e-4340.34Probable LRR receptor-like serine/threonine-protei... [more]
Y1341_ARATH2.803e-4342.45Probable LRR receptor-like serine/threonine-protei... [more]
WAKLD_ARATH2.803e-4342.33Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
WAKLB_ARATH4.780e-4341.94Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
WAKLA_ARATH4.780e-4342.13Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
CRK35_ARATH4.780e-4341.67Putative cysteine-rich receptor-like protein kinas... [more]
CRK26_ARATH4.780e-4344.24Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK18_ARATH4.780e-4343.32Cysteine-rich receptor-like protein kinase 18 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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