FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.243e-43
Identity = 97/224 (43.30%), Postives = 143/224 (63.84%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTE---KLLVYRYMANGSV-----ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            +F L +L+ ATDGF  ++++G+GG G V+KG L DG  VAVKR++ E    GE +F++EV  I+   H+NL+ L G+ ++ +    + LVY Y+ N S+       R    +S    L W  R ++A+  A+ L+YLH  C  KI+H DVK  NILLDE F AVV DFGL+KL+   ++ + T + GT G++APE+L     SEK+DV+ YGI+LLE+I G+R+
Sbjct:   92 KFKLEDLEEATDGF--RSLIGKGGSGSVFKGVLKDGSQVAVKRIEGEEK--GEREFRSEVAAIASVQHKNLVRLYGYSSSTSANRPRFLVYDYIVNSSLDIWIFPDRGNRGRSGGGCLSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRAVVTDFGLSKLIARDESRVLTDIRGTRGYLAPEWLLEHGISEKSDVYSYGIVLLEMIGGRRS 311          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.243e-43
Identity = 91/213 (42.72%), Postives = 134/213 (62.91%), Query Frame = 3
Query:  162 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            ++   T+    K I+G G    VYK      + +A+KR+  +  S    +F+TE++ I    HRN++ L G+  +    LL Y YM NGS+   L      +  LDW TR KIA+G+A+GL+YLH  C P+IIHRD+K++NILLD  FEA + DFG+AK +    T+ +T V GT+G+I PEY  T R +EK+D++ +GI+LLEL+TG++A D
Sbjct:  643 DIMRVTENLDEKYIIGYGASSTVYKCTSKTSRPIAIKRIYNQYPSNFR-EFETELETIGSIRHRNIVSLHGYALSPFGNLLFYDYMENGSLWDLLHGPGKKVK-LDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGKKAVD 853          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 6.243e-43
Identity = 95/217 (43.78%), Postives = 141/217 (64.98%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +F L+ ++ AT  FS  N LG GGFG+VYKG L +G  +AVKRL   +TSG GE++F+ EV +++   H NL+ L GF     EKLLVY ++ N S+   L +  +    LDW  R+ I  G  RG+ YLH+    KIIHRD+KA+NILLD +    + DFG+A++     T   TA V GT G+++PEY++ G+ S K+DV+ +G+++LE+I+G++
Sbjct:  346 QFDLKTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLS--KTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFD-PNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKK 559          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 6.243e-43
Identity = 96/250 (38.40%), Postives = 152/250 (60.80%), Query Frame = 3
Query:   51 IGFAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL--RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +GF  +RR + ++       E +S++       +  + ++ AT+ FS  N LG GGFG VYKG+L++G  VAVKRL + ++  G  +F+ E  +++   HRNL+ L GFC    E++L+Y ++ N S+   L   E+QS L   DW  R KI  G ARG+ YLH+    KIIHRD+KA+NILLD +    + DFGLA +   + T   T  + GT  +++PEY   G+ S K+D++ +G+++LE+I+G++
Sbjct:  308 LGFVLFRRRKSYQ---RTKTESESDISTTDSLVYDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRLSK-KSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQSQL---DWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKK 550          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.154e-43
Identity = 91/216 (42.13%), Postives = 136/216 (62.96%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            +RF+  E+   T+ F  + +LG+GGFG VY G + + + VAVK L    +S G  +F+ EV+++    H+NL+GL G+C       L+Y YMANG +   +  ++     L+W TR KI + SA+GL YLH  C P ++HRDVK  NILL+E   A + DFGL++    + +TH++T V GT G++ PEY  T   +EK+DV+ +GI+LLE+IT Q
Sbjct:  580 RRFTYSEVVTMTNNF--ERVLGKGGFGMVYHGTVNNTEQVAVKMLSHS-SSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGG-SILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQ 791          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 1.065e-42
Identity = 91/226 (40.27%), Postives = 137/226 (60.62%), Query Frame = 3
Query:  114 DDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +D  + + +L  FS  EL+ ATD FS K +LG+G  G VYKG + DGK++AVKR K       E +F  E+ ++S   HRN++ L G C      +LVY Y+ NG +  RL +       + W  R +IA+  A  L+Y+H      I HRD+K  NILLDE++ A V DFG ++ +    TH+TT V GT G++ PEY  + + ++K+DV+ +G++L+ELITG++
Sbjct:  410 NDGNVDMSRL--FSSEELKKATDNFSVKRVLGKGSQGTVYKGMMVDGKIIAVKRSKVVDEDKLE-KFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLHDESDDYA-MTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEK 631          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.065e-42
Identity = 100/242 (41.32%), Postives = 139/242 (57.44%), Query Frame = 3
Query:   69 RRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            R  RP+       A DD     G L RF  R ++ AT  F   N LG GGFG VYKG   +G  VA KRL +  +  GE +F+ EV +++   H+NL+GL GF     EK+LVY ++ N S+   L +    +  LDWP R  I  G  RG+ YLH+     IIHRD+KA+NILLD E    + DFGLA+      T   T  V GT G++ PEY++ G+ S K+DV+ +G+++LE+I G++
Sbjct:  325 RPRRPYGTASPDDATDDLTASSGSL-RFDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTEVAAKRLSKP-SDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQ-LDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKK 563          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.391e-42
Identity = 89/217 (41.01%), Postives = 133/217 (61.29%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLK---EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            F+ +EL+ AT+ FS   +LG GG G VYKG L DG+ VAVK+ K   E++      +F  EV I+S   HR+++ L G C      +LVY ++ NG++   + E ++    + W  R +IA+  A  LSYLH      I HRD+K+ NILLDE++ A V DFG ++ +    TH TT + GTVG++ PEY  + + +EK+DV+ +G++L ELITG +
Sbjct:  432 FTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQ----EFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDK 644          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.391e-42
Identity = 96/233 (41.20%), Postives = 144/233 (61.80%), Query Frame = 3
Query:  114 DDSELQLGQLKR-FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPP-LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            D  ELQ  +  R F+  EL+ A DGF  ++I+G+G F  VYKG L DG  VAVKR +          +F+TE+ ++S   H +LL L G+C    E+LLVY +MA+GS+ + L  +  +L   LDW  R  IA+ +ARG+ YLH +  P +IHRD+K++NIL+DEE  A V DFGL+ L      + +     GT+G++ PEY      + K+DV+ +G++LLE+++G++A D
Sbjct:  487 DLDELQKRRRARVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAID 719          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.817e-42
Identity = 87/219 (39.73%), Postives = 135/219 (61.64%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            ++++  LQVAT+ FS +NI+G G  G+VY+    +GK++A+K++     S   E  F   V  +S   H N++ L G+CT   ++LLVY Y+ NG++   L         L W  R K+ALG+A+ L YLHE C P I+HR+ K+ANILLDEE    + D GLA L    +  ++T V G+ G+ APE+  +G  + K+DV+ +G+++LEL+TG++  D
Sbjct:  382 QYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLD 600          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5005_ARATH6.243e-4343.30Probable receptor-like protein kinase At5g20050 OS... [more]
ERL2_ARATH6.243e-4342.72LRR receptor-like serine/threonine-protein kinase ... [more]
CRK17_ARATH6.243e-4343.78Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK11_ARATH6.243e-4338.40Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
RLK6_ARATH8.154e-4342.13Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
WAKLE_ARATH1.065e-4240.27Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
CRK21_ARATH1.065e-4241.32Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
WAKLM_ARATH1.391e-4241.01Wall-associated receptor kinase-like 17 OS=Arabido... [more]
ACR4_ARATH1.391e-4241.20Serine/threonine-protein kinase-like protein ACR4 ... [more]
SRF8_ARATH1.817e-4239.73Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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