FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.817e-42
Identity = 89/214 (41.59%), Postives = 137/214 (64.02%), Query Frame = 3
Query:  198 NILGRGGFGKVYKGRLADGKLVAVKRL---------KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            N++G+G  G VYK  + + +++AVK+L         ++ ++SG    F  EVK +    H+N++   G C     +LL+Y YM+NGS+ S L ER S +  L W  R KI LG+A+GL+YLH  C P I+HRD+KA NIL+  +FE  +GDFGLAKL+D  D    +  + G+ G+IAPEY  + + +EK+DV+ YG+++LE++TG++  DP +
Sbjct:  789 NVIGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHER-SGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTI 1001          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.817e-42
Identity = 103/232 (44.40%), Postives = 141/232 (60.78%), Query Frame = 3
Query:  123 ELQLGQLKRFSLRELQ-------VATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            E++L Q    S+R LQ        AT+ FS +  LG GG G V+KGRL DGK +AVKRL E +T   + +F+ EV +++   HRNL+ L GF     EK++VY Y+ N S+   L +  +    LDW  R KI  G+ARG+ YLH+   P IIHRD+KA NILLD      V DFG A++  MD +   IT    GT G++APEY+  G  S K+DV+ YG+++LE+I G+R
Sbjct:  332 EVELNQTGITSVRSLQYKFKTIETATNNFSER--LGHGGSGHVFKGRLPDGKEIAVKRLSE-KTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFD-PTKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMD-QSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKR 558          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.372e-42
Identity = 93/222 (41.89%), Postives = 136/222 (61.26%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPA 806
            +R +  E+ + T+ F  + ++G GGFG VY G L D + VAVK L    +S G  +F+ EV+++    H NL+ L G+C       L+Y YMANG + S L  +      L W  R  IA+ +A GL YLH  C P ++HRDVK+ NILLDE F+A + DFGL++     +++H++T V GT G++ PEY  T R +EK+DV+ +GI+LLE+IT Q   + A
Sbjct:  561 RRITYSEILLMTNNF--ERVIGEGGFGVVYHGYLNDSEQVAVKVLSPS-SSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHGDCV-LKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQA 778          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 3.099e-42
Identity = 91/214 (42.52%), Postives = 129/214 (60.28%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            FS REL+ ATD FS   ILG+GG G VYKG L DG+ VAVK+ K       E +F  EV I+S   HR+++ L G C       LVY ++ NG++   + E         W  R +IA+  A  LSYLH      I HRD+K+ NILLDE++   V DFG ++ +    TH TT + GTVG++ PEY  + + ++K+DV+ +G++L+ELITG++
Sbjct:  439 FSSRELEKATDNFSESRILGQGGQGTVYKGMLVDGRTVAVKKSKVVDEDKLE-EFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKT-WGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEK 650          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.099e-42
Identity = 90/220 (40.91%), Postives = 133/220 (60.45%), Query Frame = 3
Query:  132 LGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            + + K FS  +L+ ATD F+   ILG+GG G VYKG L DG +VAVK+ K  +    E +F  E+ ++S   HRN++ + G C      +LVY ++ N ++   L       P + W  R  IA   A  LSYLH      I HRDVK+ NILLDE+  A V DFG+++ +   DTH+TT V GT+G++ PEYL +   + K+DV+ +G++L+EL+TG++
Sbjct:  372 VNRTKVFSSNDLENATDRFNASRILGQGGQGTVYKGMLEDGMIVAVKKSKALKEENLE-EFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHNPSEDFP-MSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEK 589          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 3.099e-42
Identity = 91/216 (42.13%), Postives = 130/216 (60.19%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            K FS REL+ ATD FS   +LG+GG G VYK  L DG +VAVKR K       E +F  E+ ++S   HRN++ L G C      +LVY Y+ NG +  RL +       + W  R +IA+  A  LSY+H      I HRD+K  NILLDE++ A + DFG ++ +    TH+TT V GT G++ PEY  + + + K+DV+ +G++L+ELITG++
Sbjct:  414 KIFSSRELEKATDNFSIDRVLGQGGQGTVYKRMLVDGSIVAVKRSKVVDEDKME-EFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDEYDDYM-MTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEK 627          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.099e-42
Identity = 92/216 (42.59%), Postives = 139/216 (64.35%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-HITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            F   E+   T+ F  + ++G+GGFGKVY G + +G+ VAVK L EE   G + +F+ EV ++    H NL  L G+C  +   +L+Y YMAN ++   L  ++S +  L W  R KI+L +A+GL YLH  C P I+HRDVK  NILL+E+ +A + DFGL++    + +  I+T V G++G++ PEY ST + +EK+DV+  G++LLE+ITGQ A
Sbjct:  564 FKYSEVVNITNNF--ERVIGKGGFGKVYHG-VINGEQVAVKVLSEESAQGYK-EFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRSFI--LSWEERLKISLDAAQGLEYLHNGCKPPIVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQPA 773          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 3.099e-42
Identity = 107/246 (43.50%), Postives = 146/246 (59.35%), Query Frame = 3
Query:   57 FAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            F   R  RP E +    +E   +      +R+S REL  AT  F  K  LGRG  G VYKG L D + VAVK+L+  R   G+  FQ E+ +I    H NL+ + GFC+  + +LLV  Y+ NGS+A+ L     ++  LDW  R  IALG A+GL+YLH  C   +IH DVK  NILLD+ FE  + DFGL KL++    T   + V GT+G+IAPE++S+   + K DV+ YG++LLEL+TG R
Sbjct:  496 FVLKRELRPSELW---ASEKGYKAMTSNFRRYSYRELVKATRKF--KVELGRGESGTVYKGVLEDDRHVAVKKLENVRQ--GKEVFQAELSVIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGSLANILFSEGGNIL-LDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTGTR 733          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 3.099e-42
Identity = 101/250 (40.40%), Postives = 149/250 (59.60%), Query Frame = 3
Query:   51 IGFAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            +G+A  RR + ++ F    A ++     G L+ F  + ++ AT+ F   N LG GGFG+V+KG   +G  VAVKRL   + SG GE +F+ EV +++   HRNL+ L GF     EK+LVY YM N S+   L + +     LDW TR  I  G  RG+ YLH+     IIHRD+KA NILLD +    + DFG+A+      T  TT  V GT G++ PEY++ G+ S K+DV+ +G+++LE+I G+++
Sbjct:  295 LGYALSRRRKAYQEF----ATENDITTSGSLQ-FDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKRLS--KISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRR-GQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKS 536          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.099e-42
Identity = 92/232 (39.66%), Postives = 145/232 (62.50%), Query Frame = 3
Query:  114 DDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKR-LKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPP-LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            D  +L++ + + FS  EL+ AT GFS  + +G+G F  V+KG L DG +VAVKR +K         +F  E+ ++S   H +LL L G+C   +E+LLVY +MA+GS+   L  +  +L   L+W  R  IA+ +ARG+ YLH +  P +IHRD+K++NIL+DE+  A V DFGL+ L      T ++    GT+G++ PEY      + K+DV+ +G++LLE+++G++A D
Sbjct:  481 DMEDLKIRRAQEFSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAID 712          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RCH1_ARATH1.817e-4241.59LRR receptor-like serine/threonine-protein kinase ... [more]
CRK13_ARATH1.817e-4244.40Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
Y5169_ARATH2.372e-4241.89Probable LRR receptor-like serine/threonine-protei... [more]
WAKLK_ARATH3.099e-4242.52Putative wall-associated receptor kinase-like 11 O... [more]
WAKLG_ARATH3.099e-4240.91Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
WAKLC_ARATH3.099e-4242.13Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
SIRK_ARATH3.099e-4242.59Senescence-induced receptor-like serine/threonine-... [more]
KPRO_MAIZE3.099e-4243.50Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
CRK16_ARATH3.099e-4240.40Putative cysteine-rich receptor-like protein kinas... [more]
CRI4_MAIZE3.099e-4239.66Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
back to top