FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.047e-42
Identity = 89/213 (41.78%), Postives = 135/213 (63.38%), Query Frame = 3
Query:  198 NILGRGGFGKVYKGRLADGKLVAVKRL--------KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-HITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            N++G+G  G VY+  + +G+++AVK+L         +E+T      F  EVK +    H+N++   G C     +LL+Y YM NGS+ S L ER+ S   LDW  R +I LG+A+GL+YLH  C P I+HRD+KA NIL+  +FE  + DFGLAKL+D  D    +  V G+ G+IAPEY  + + +EK+DV+ YG+++LE++TG++  DP +
Sbjct:  790 NVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGS--SLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTV 1000          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 5.285e-42
Identity = 104/237 (43.88%), Postives = 144/237 (60.76%), Query Frame = 3
Query:   96 FDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEK--LLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            FD+  E   EL +G +  FS  EL+ AT+ F     LG GGFG VY G+L DG+ VAVKRL +      E QF+ EV+I++   H NL+ L G C++   +  LLVY Y+ANG++A  L   Q++   L W  R KIA+ +A  L YLH     KIIHRDVK+ NILLD+ F   V DFGL++L     TH++TA  GT G++ P+Y    + S K+DV+ + ++L+ELI+   A D
Sbjct:  317 FDI--EKAEELLVG-VHIFSYEELEEATNNFDPSKELGDGGFGTVYYGKLKDGRSVAVKRLYDNNFKRAE-QFRNEVEILTGLRHPNLVALFG-CSSKQSRDLLLVYEYVANGTLADHLHGPQANPSSLPWSIRLKIAVETASALKYLHAS---KIIHRDVKSNNILLDQNFNVKVADFGLSRLFPMDKTHVSTAPQGTPGYVDPDYHLCYQLSNKSDVYSFAVVLMELISSLPAVD 545          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.285e-42
Identity = 92/217 (42.40%), Postives = 132/217 (60.83%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            K FS REL+ ATD F++  ++G+GG G VYKG L DG+ VAVK  K       +LQ F  EV I+S   HR+++ L G C      +LVY ++ NG++   L E       L W  R +IA+  +   SYLH      I HRD+K+ NILLDE++ A V DFG ++ +    TH TT + GTVG++ PEY  +   +EK+DV+ +G++L+ELITG++
Sbjct:  440 KLFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVK--KSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTAL-WGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEK 653          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.285e-42
Identity = 94/248 (37.90%), Postives = 146/248 (58.87%), Query Frame = 3
Query:   51 IGFAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +G   W+R + ++    +    D ++   Q  +F    ++VATD FS  N LG+GGFG+VYKG L +   +AVKRL      G + +F+ EV I++   H+NL+ L GFC    E++LVY +++N S+   L + +     LDW  R  I  G  RGL YLH+     IIHRD+KA+NILLD +    + DFG+A+      T   T  V GT G++ PEY++ G+ S K+DV+ +G+++LE++ G++
Sbjct:  297 LGLVIWKRRQSYK---TLKYHTDDDMTSPQSLQFDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNSGQGTQ-EFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFDPKMK-SQLDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTGRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKK 539          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.903e-42
Identity = 92/232 (39.66%), Postives = 147/232 (63.36%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD----------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP-KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            +K F+  EL++AT  F   +++G GGFG V+KG L +          G ++AVK+L +E   G   ++ TE+  +    H NL+ L G+C     +LLVY +M  GS+ + L  R +   PL W  R  +AL +A+GL++LH   DP K+I+RD+KA+NILLD ++ A + DFGLA+     D ++++T V GT G+ APEY+S+G  + ++DV+ +G++LLE+++G+RA D
Sbjct:   52 VKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHR-EWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHS--DPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALD 280          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.015e-42
Identity = 91/222 (40.99%), Postives = 134/222 (60.36%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            R S  ELQ  T+ F    ++G GGFG V++G L D   VAVKR     +  G  +F +E+ I+S   HR+L+ L G+C   +E +LVY YM  G + S L    S+ PPL W  R ++ +G+ARGL YLH      IIHRD+K+ NILLD  + A V DFGL++     D TH++T V G+ G++ PEY    + ++K+DV+ +G++L E++  + A DP +
Sbjct:  476 RISFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKR-GSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYG--STNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPLL 694          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.015e-42
Identity = 93/221 (42.08%), Postives = 131/221 (59.28%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY--KDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            KRF+  E+   T        LG GGFG VY G L   + VAVK L +    G + +F+ EV+++    H NL+ L G+C       L+Y YM+NG +   L  +      L+W TR +IA+ +A GL YLH  C P ++HRDVK+ NILLDEEF+A + DFGL++        + ++T V GT+G++ PEY  T   SEK+DV+ +GI+LLE+IT QR  D
Sbjct:  554 KRFTYSEVMEMTKNLQRP--LGEGGFGVVYHGDLNGSEQVAVKLLSQTSAQGYK-EFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHGG-SVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVID 770          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.015e-42
Identity = 91/222 (40.99%), Postives = 136/222 (61.26%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD--GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL--RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            R   ++L  ATDGF    I+G GGFG V++G L+      +AVK++      G   +F  E++ +    H+NL+ L G+C    + LL+Y Y+ NGS+ S L  R RQS +  L W  R KIA G A GL YLHE  +  +IHRD+K +N+L++++    +GDFGLA+L +      TT V GT+G++APE    G+SS  +DVF +G++LLE+++G+R  D
Sbjct:  348 RLRYKDLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVR-EFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVV-LSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTD 567          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.177e-41
Identity = 92/216 (42.59%), Postives = 130/216 (60.19%), Query Frame = 3
Query:  156 LRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            L ++  ATD   +K I+GRG  G VY+  L  G+  AVK+L            + E++ I +  HRNL+ L  F     + L++Y+YM NGS+   L         LDW  R  IALG + GL+YLH  C P IIHRD+K  NIL+D + E  +GDFGLA+++D  D+ ++TA V GT G+IAPE       S+++DV+ YG++LLEL+TG+RA D
Sbjct:  784 LNKVLAATDNLDDKYIIGRGAHGVVYRASLGSGEEYAVKKLIFAEHIRANQNMKREIETIGLVRHRNLIRLERFWMRKEDGLMLYQYMPNGSLHDVLHRGNQGEAVLDWSARFNIALGISHGLAYLHHDCHPPIIHRDIKPENILMDSDMEPHIGDFGLARILD--DSTVSTATVTGTTGYIAPENAYKTVRSKESDVYSYGVVLLELVTGKRALD 997          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.177e-41
Identity = 98/251 (39.04%), Postives = 154/251 (61.35%), Query Frame = 3
Query:   51 IGFAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL--RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +G +  R  + ++ F    A+D + +  G L+ F +++++ AT  F   N +G+GGFG+VYKG L++G  VAVKRL   RTS  GEL+F+ EV +++   HRNL+ L GF     EK+LV+ ++ N S+   L      +    LDW  R  I  G  RGL YLH+     IIHRD+KA+NILLD +    + DFG+A+   D++    T  V GT G++ PEY++ G+ S K+DV+ +G+++LE+++G++
Sbjct:  304 LGVSVCRSRKKYQAFASETADDITTV--GYLQ-FDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLS--RTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRK 549          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RCH2_ARATH4.047e-4241.78Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
Y1839_ARATH5.285e-4243.88Probable serine/threonine-protein kinase At1g18390... [more]
WAKLL_ARATH5.285e-4242.40Putative wall-associated receptor kinase-like 13 O... [more]
CRK31_ARATH5.285e-4237.90Putative cysteine-rich receptor-like protein kinas... [more]
BIK1_ARATH6.903e-4239.66Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y5241_ARATH9.015e-4240.99Probable receptor-like protein kinase At5g24010 OS... [more]
MEE39_ARATH9.015e-4242.08Probable LRR receptor-like serine/threonine-protei... [more]
LRKA2_ARATH9.015e-4240.99Lectin-domain containing receptor kinase A4.2 OS=A... [more]
PEPR2_ARATH1.177e-4142.59Leucine-rich repeat receptor-like protein kinase P... [more]
CRK30_ARATH1.177e-4139.04Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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