FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 4.769e-51
Identity = 102/226 (45.13%), Postives = 147/226 (65.04%), Query Frame = 3
Query:  111 EDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            +D   L+L  +  FSLR++++AT+ F + N +G GGFG VYKG+L DG ++AVK+L      G   +F  E+ +IS   H NL+ L G C    + LLVY ++ N S+A  L   Q +   LDWPTR+KI +G ARGL+YLHE    KI+HRD+KA N+LLD++    + DFGLAKL +   THI+T + GT G++APEY   G  ++K DV+ +GI+ LE++ G+
Sbjct:  600 KDFKSLEL-MIASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNR-EFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGR 823          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 201.445 bits (511), Expect = 4.769e-51
Identity = 104/219 (47.49%), Postives = 144/219 (65.75%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            K  S  +L  +T+ F   NI+G GGFG VYK  L DGK VA+K+L  +     E +F+ EV+ +S A H NL+ L GFC    ++LL+Y YM NGS+   L ER      L W TR +IA G+A+GL YLHE CDP I+HRD+K++NILLDE F + + DFGLA+LM   +TH++T + GT+G+I PEY     ++ K DV+ +G++LLEL+T +R  D
Sbjct:  720 KELSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSGD-CGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVD 937          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.229e-51
Identity = 98/217 (45.16%), Postives = 151/217 (69.59%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            +S +++    +  + ++I+G GGFG VYK  + DGK+ A+KR+ +    G +  F+ E++I+    HR L+ L G+C + T KLL+Y Y+  GS+   L ER   L   DW +R  I +G+A+GLSYLH  C P+IIHRD+K++NILLD   EA V DFGLAKL++ +++HITT V GT G++APEY+ +GR++EKTDV+ +G+++LE+++G+R  D
Sbjct:  294 YSSKDIIKKLEMLNEEHIIGCGGFGTVYKLAMDDGKVFALKRILK-LNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHERGEQL---DWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTD 506          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.135e-51
Identity = 106/244 (43.44%), Postives = 157/244 (64.34%), Query Frame = 3
Query:   63 YWRRTRPHEFFFDVPAE-DDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRER-QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            +W++ R      D+  E    +LQ G    F+LR+++ ATD F     +G GGFG VYKG L++GKL+AVK+L  +   G   +F  E+ +IS   H NL+ L G C    + +LVY Y+ N  ++  L  + +SS   LDW TRKKI LG A+GL++LHE    KI+HRD+KA+N+LLD++  A + DFGLAKL D  +THI+T + GT+G++APEY   G  +EK DV+ +G++ LE+++G+
Sbjct:  642 FWKKRRDKN---DIDKELRGLDLQTGT---FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNR-EFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGK 878          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.135e-51
Identity = 99/211 (46.92%), Postives = 136/211 (64.45%), Query Frame = 3
Query:  174 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPA 806
            AT  FSN N +G GGFG  YK  ++   + AVKRL   R  G + QF  E+  + M  H NL+ L G+  + TE  L+Y Y++ G++   ++ER  +   ++W    KIAL  AR LSYLHE C PK++HRD+K +NILLD  + A + DFGL+KL+    +H+TT V GT G++APEY  T R SEK DV+ YGI+LLELI+ +RA DP+
Sbjct:  257 ATGYFSNSNCIGHGGFGSTYKAEVSPTNVFAVKRLSVGRFQGDQ-QFHAEISALEMVRHPNLVMLIGYHASETEMFLIYNYLSGGNLQDFIKERSKAA--IEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPS 464          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.062e-50
Identity = 102/222 (45.95%), Postives = 145/222 (65.32%), Query Frame = 3
Query:  123 ELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            +LQ G    F+L++++ AT+ F  +N +G GGFG VYKG LADG  +AVK+L  +   G   +F TE+ +IS   H NL+ L G C    E LLVY Y+ N S+A  L   +     LDW TR KI +G A+GL+YLHE    KI+HRD+KA N+LLD    A + DFGLAKL D ++THI+T + GT+G++APEY   G  ++K DV+ +G++ LE+++G+
Sbjct:  651 DLQTGS---FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNR-EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGK 868          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.812e-50
Identity = 102/230 (44.35%), Postives = 149/230 (64.78%), Query Frame = 3
Query:  120 SELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD------THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            + L++  +K F+  EL +ATD F++   +G+GG+GKVYKG L  G +VA+KR +E    G E +F TE++++S   HRNL+ L GFC    E++LVY YM NG++   +  +     PLD+  R +IALGSA+G+ YLH   +P I HRD+KA+NILLD  F A V DFGL++L    D       H++T V GT G++ PEY  T + ++K+DV+  G++LLEL TG +
Sbjct:  603 ASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQG-EKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKE--PLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQ 829          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.091e-50
Identity = 100/222 (45.05%), Postives = 149/222 (67.12%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRER-QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVH---GTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            + +  L +L  AT+ F   NI+  G  G +YKGRL DG L+ +KRL++ + S  E +F  E+K +    +RNL+ L G+C    E+LL+Y YMANG +  +L    + S  PLDWP+R KIA+G+A+GL++LH  C+P+IIHR++ +  ILL  EFE  + DFGLA+LM+  DTH++T V+   G  G++APEY  T  ++ K DV+ +G++LLEL+TGQ+A
Sbjct:  288 VSKMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQDSQRS--EKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKA 507          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 3.091e-50
Identity = 111/227 (48.90%), Postives = 143/227 (63.00%), Query Frame = 3
Query:  114 DDSELQLGQLKR--FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            DD EL    +K   F+  EL+ AT  F   N LG GGFG VYKG L DG++VAVK L      G + QF  E+  IS  +HRNL+ L G C     ++LVY Y+ NGS+   L   ++    LDW TR +I LG ARGL YLHE    +I+HRDVKA+NILLD      + DFGLAKL D K THI+T V GT+G++APEY   G  +EKTDV+ +G++ LEL++G+
Sbjct:  668 DDEELLGMDVKPYIFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQG-KGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTL--HLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGR 891          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.091e-50
Identity = 98/212 (46.23%), Postives = 140/212 (66.04%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITG 785
            F+LR+++ ATD F+  N +G GGFG V+KG LADG++VAVK+L  +   G   +F  E+  IS   H NL+ L GFC    + LL Y YM N S++S L   +    P+DWPTR KI  G A+GL++LHE    K +HRD+KA NILLD++    + DFGLA+L + + THI+T V GT+G++APEY   G  + K DV+ +G+++LE++ G
Sbjct:  669 FTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNR-EFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAG 879          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1534_ARATH4.769e-5145.13Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_ARATH4.769e-5147.49Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
FEI1_ARATH6.229e-5145.16LRR receptor-like serine/threonine-protein kinase ... [more]
Y1765_ARATH8.135e-5143.44Probable LRR receptor-like serine/threonine-protei... [more]
RPK1_ARATH8.135e-5146.92Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH1.062e-5045.95Probable LRR receptor-like serine/threonine-protei... [more]
Y1684_ARATH1.812e-5044.35Probable LRR receptor-like serine/threonine-protei... [more]
Y5838_ARATH3.091e-5045.05Probably inactive leucine-rich repeat receptor-lik... [more]
Y1561_ARATH3.091e-5048.90Probable LRR receptor-like serine/threonine-protei... [more]
RKF1_ARATH3.091e-5046.23Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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