FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.037e-50
Identity = 112/227 (49.34%), Postives = 143/227 (63.00%), Query Frame = 3
Query:  114 DDSELQLGQLK--RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            DD E+    +K   F+  EL+ AT  F   N LG GGFG VYKG+L DG+ VAVK L      G + QF  E+  IS   HRNL+ L G C     +LLVY Y+ NGS+   L   ++    LDW TR +I LG ARGL YLHE    +I+HRDVKA+NILLD +    V DFGLAKL D K THI+T V GT+G++APEY   G  +EKTDV+ +G++ LEL++G+
Sbjct:  667 DDEEILSMDVKPYTFTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQG-KGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTL--HLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGR 890          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.037e-50
Identity = 100/222 (45.05%), Postives = 145/222 (65.32%), Query Frame = 3
Query:  123 ELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            +LQ G    F+L++++ AT+ F  +N +G GGFG VYKG LADG  +AVK+L  +   G   +F TE+ +IS   H NL+ L G C    E LLVY Y+ N S+A  L   +     LDW TR K+ +G A+GL+YLHE    KI+HRD+KA N+LLD    A + DFGLAKL + ++THI+T + GT+G++APEY   G  ++K DV+ +G++ LE+++G+
Sbjct:  649 DLQTGS---FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNR-EFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGK 866          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.994e-50
Identity = 105/223 (47.09%), Postives = 149/223 (66.82%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTV-----TEKLLVYRYMANGSVASRLRER-QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            F + EL+ AT+ FS KN +GRGGFG VYKG L DG ++AVK++ E    G + +F+ EV+IIS   HRNL+ L G C+ V     +++ LVY YM+NG++   L  R +++  PL WP RK I L  A+GL+YLH    P I HRD+K  NILLD +  A V DFGLAK     ++H+TT V GT G++APEY   G+ +EK+DV+ +G+++LE++ G++A D
Sbjct:  283 FKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQG-DAEFRNEVEIISNLKHRNLVPLRG-CSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALD 503          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.534e-49
Identity = 104/214 (48.60%), Postives = 145/214 (67.76%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            FS   L+ ATD FS+KN LG+GG G VYKG L +GK VAVKRL        +  F  EV +IS   H+NL+ L G   T  E LLVY Y+AN S+   L  R+  + PL+W  R KI LG+A G++YLHE  + +IIHRD+K +NILL+++F   + DFGLA+L     THI+TA+ GT+G++APEY+  G+ +EK DV+ +G++++E+ITG+R
Sbjct:  311 FSYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVAVKRLFFNTKQWVD-HFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKD-VQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKR 522          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.617e-49
Identity = 99/232 (42.67%), Postives = 153/232 (65.95%), Query Frame = 3
Query:   96 FDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            F +P++DD  ++   +K F+L  ++ AT+ +  K ++G GGFG VY+G L DG+ VAVK ++   ++ G  +F  E+ ++S   H NL+ L G+C    +++LVY +M+NGS+  RL    S    LDWPTR  IALG+ARGL+YLH      +IHRDVK++NILLD+   A V DFG +K    + D++++  V GT G++ PEY  T + SEK+DVF +G++LLE+++G+
Sbjct:  568 FSLPSKDDFFIKSVSVKPFTLEYIEQATEQY--KTLIGEGGFGSVYRGTLDDGQEVAVK-VRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGR 796          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.830e-49
Identity = 98/232 (42.24%), Postives = 153/232 (65.95%), Query Frame = 3
Query:   96 FDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            F +P++DD  ++   +K F+L  +++AT+ +  K ++G GGFG VY+G L DG+ VAVK ++   ++ G  +F  E+ ++S   H NL+ L G+C    +++LVY +M+NGS+  RL    +    LDWPTR  IALG+ARGL+YLH      +IHRDVK++NILLD    A V DFG +K    + D++++  V GT G++ PEY  T + SEK+DVF +G++LLE+++G+
Sbjct:  567 FSLPSKDDFFIKSVSVKPFTLEYIELATEKY--KTLIGEGGFGSVYRGTLDDGQEVAVK-VRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGR 795          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.614e-49
Identity = 100/223 (44.84%), Postives = 143/223 (64.13%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            ++F+L E++ AT  F +   +G GGFGKVY+G L DG L+A+KR     +  G  +F+TE+ ++S   HR+L+ L GFC    E +LVY YMANG++ S L    S+LPPL W  R +  +GSARGL YLH   +  IIHRDVK  NILLDE F A + DFGL+K     D TH++TAV G+ G++ PEY    + +EK+DV+ +G++L E +  +   +P +
Sbjct:  506 RKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPH-SQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFG--SNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTL 725          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.945e-49
Identity = 103/227 (45.37%), Postives = 145/227 (63.88%), Query Frame = 3
Query:  126 LQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-----DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            + +  +K ++  EL  AT  FS+ + +GRGG+GKVYKG L  G +VAVKR  E+ +  G+ +F TE++++S   HRNL+ L G+C    E++LVY YM NGS+   L  R     PL    R +IALGSARG+ YLH   DP IIHRD+K +NILLD +    V DFG++KL+       +  H+TT V GT G++ PEY  + R +EK+DV+  GI+ LE++TG R
Sbjct:  611 MNMESVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRA-EQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQ--PLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMR 834          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.945e-49
Identity = 105/230 (45.65%), Postives = 146/230 (63.48%), Query Frame = 3
Query:  132 LGQLKR--FSLRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            LGQ+    F+ REL  AT  F     LG GGFG+VYKGRL + G++VAVK+L      G   +F  EV ++S+  H NL+ L G+C    ++LLVY +M  GS+   L +       LDW  R KIA G+A+GL +LH+  +P +I+RD K++NILLDE F   + DFGLAKL    D +H++T V GT G+ APEY  TG+ + K+DV+ +G++ LELITG++A D  M
Sbjct:   66 LGQIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEM 294          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.945e-49
Identity = 93/217 (42.86%), Postives = 149/217 (68.66%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            ++ +++    +  + ++I+G GGFG VYK  + DG + A+KR+ +    G +  F+ E++I+    HR L+ L G+C + T KLL+Y Y+  GS+   L +R   L   DW +R  I +G+A+GL+YLH  C P+IIHRD+K++NILLD   EA V DFGLAKL++ +++HITT V GT G++APEY+ +GR++EKTDV+ +G+++LE+++G+   D
Sbjct:  292 YASKDIIKKLESLNEEHIIGCGGFGTVYKLSMDDGNVFALKRIVK-LNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHKRGEQL---DWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTD 504          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5614_ARATH4.037e-5049.34Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH4.037e-5045.05Probable LRR receptor-like serine/threonine-protei... [more]
Y1105_ARATH8.994e-5047.09Probable receptor-like protein kinase At1g11050 OS... [more]
CRK3_ARATH1.534e-4948.60Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
NORK_MEDTR2.617e-4942.67Nodulation receptor kinase OS=Medicago truncatula ... [more]
NORK_PEA5.830e-4942.24Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y1357_ARATH7.614e-4944.84Probable receptor-like protein kinase At1g30570 OS... [more]
Y5374_ARATH9.945e-4945.37Probable LRR receptor-like serine/threonine-protei... [more]
PBS1_ARATH9.945e-4945.65Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
FEI2_ARATH9.945e-4942.86LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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