FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.696e-48
Identity = 101/221 (45.70%), Postives = 143/221 (64.71%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            F  +E+  AT+ F   ++LG GGFG+VYKG L DG  VAVKR    R+  G  +F+TE++++S   HR+L+ L G+C   +E +LVY YMANG + S L    + LPPL W  R +I +G+ARGL YLH      IIHRDVK  NILLDE   A V DFGL+K     D TH++TAV G+ G++ PEY    + +EK+DV+ +G++L+E++  + A +P +
Sbjct:  498 FMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKR-GNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYG--ADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVL 715          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.215e-48
Identity = 101/219 (46.12%), Postives = 142/219 (64.84%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            F+ +EL  AT  F +   LG GGFGKV+KG +    ++VA+K+L      G   +F  EV  +S+A H NL+ L GFC    ++LLVY YM  GS+   L    S   PLDW TR KIA G+ARGL YLH+   P +I+RD+K +NILL E+++  + DFGLAK+    D TH++T V GT G+ AP+Y  TG+ + K+D++ +G++LLELITG++A D
Sbjct:   91 FTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIR-EFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAID 308          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.779e-48
Identity = 101/214 (47.20%), Postives = 145/214 (67.76%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            FS +E++ AT  F  K ++GRG FG VY+G+L DGK VAVK ++ +RT  G   F  EV ++S   H+NL+   GFC     ++LVY Y++ GS+A  L   +S    L+W +R K+A+ +A+GL YLH   +P+IIHRDVK++NILLD++  A V DFGL+K     D +HITT V GT G++ PEY ST + +EK+DV+ +G++LLELI G+
Sbjct:  596 FSHKEIKSATRNF--KEVIGRGSFGAVYRGKLPDGKQVAVK-VRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGR 806          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.779e-48
Identity = 101/241 (41.91%), Postives = 150/241 (62.24%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEER------TSGGELQFQTEVKIISMAVHRNLLGLCGFC--TTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDP 803
            P   +S++     +RF+++++  AT GF +  I+GRG  G VYK  +  GK +AVK+L+  R      ++  +  F+ E+  +    HRN++ L  FC        LL+Y YM+ GS+   L   +S    +DWPTR  IALG+A GL+YLH  C P+IIHRD+K+ NIL+DE FEA VGDFGLAK++D   +   +AV G+ G+IAPEY  T + +EK D++ +G++LLEL+TG+    P
Sbjct:  792 PFFQESDIYFVPKERFTVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHGGKSH--SMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQP 1030          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.779e-48
Identity = 101/213 (47.42%), Postives = 141/213 (66.20%), Query Frame = 3
Query:  153 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            SL  L+ ATD FS K  +GRG FG VY GR+ DGK VAVK +  + +S    QF TEV ++S   HRNL+ L G+C     ++LVY YM NGS+   L    S   PLDW TR +IA  +A+GL YLH  C+P IIHRDVK++NILLD    A V DFGL++  +   TH+++   GTVG++ PEY ++ + +EK+DV+ +G++L EL++G++
Sbjct:  597 SLPVLEEATDNFSKK--VGRGSFGSVYYGRMKDGKEVAVK-ITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHG-SSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKK 805          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.779e-48
Identity = 99/244 (40.57%), Postives = 154/244 (63.11%), Query Frame = 3
Query:   93 FFDVPAEDDSELQLG--------QLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            + +VP   D ++ L         ++K  ++ EL  ATD FS  NI+G GGFG VYK  L +G  +AVK+L  +     E +F+ EV+++S A H NL+ L G+C   + ++L+Y +M NGS+   L E       LDWP R  I  G++ GL+Y+H+ C+P I+HRD+K++NILLD  F+A V DFGL++L+    TH+TT + GT+G+I PEY     ++ + DV+ +G+++LEL+TG+R  +
Sbjct:  764 YSEVPPGSDKDISLVLLFGNSRYEVKDLTIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMM-EKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPME 1006          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.446e-48
Identity = 106/242 (43.80%), Postives = 152/242 (62.81%), Query Frame = 3
Query:   66 WRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            W+R + H    DV   ++ +  L    RF LR +  AT+ FS +N LG+GGFG VYKG L  G+ +AVKRL++    GG ++F+ EV +++   HRNL+ L GFC    E++LVY ++ N S+   + + +     L W  R  I  G ARGL YLHE    +IIHRD+KA+NILLD E    V DFG+A+L D  +T   T+ V GT G++APEY + G+ S K+DV+ +G+MLLE+I+G+
Sbjct:  309 WKRKQSHTIINDVFDSNNGQSML----RFDLRMIVTATNNFSLENKLGQGGFGSVYKGILPSGQEIAVKRLRKGSGQGG-MEFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEEKRRV-LTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGK 544          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.099e-47
Identity = 94/211 (44.55%), Postives = 136/211 (64.45%), Query Frame = 3
Query:  174 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPA 806
            AT  F+  N++G GGFG  YK  ++   +VA+KRL   R  G + QF  E+K +    H NL+ L G+  + TE  LVY Y+  G++   ++ER +     DW    KIAL  AR L+YLH+ C P+++HRDVK +NILLD++  A + DFGLA+L+   +TH TT V GT G++APEY  T R S+K DV+ YG++LLEL++ ++A DP+
Sbjct:  870 ATGNFNASNLIGNGGFGATYKAEISQDVVVAIKRLSIGRFQGVQ-QFHAEIKTLGRLRHPNLVTLIGYHASETEMFLVYNYLPGGNLEKFIQERSTR----DWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDCNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPS 1075          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.199e-47
Identity = 95/222 (42.79%), Postives = 145/222 (65.32%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-----HRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            F+  ++  AT  FS + ++GRGG+G VY+G L DG+ VAVK+L+ E T   E +F+ E++++S        H NL+ L G+C   +EK+LV+ YM  GS+   + ++      L W  R  IA   ARGL +LH  C P I+HRDVKA+N+LLD+   A V DFGLA+L++  D+H++T + GT+G++APEY  T +++ + DV+ YG++ +EL TG+RA D
Sbjct:  802 FTYADILKATSNFSEERVVGRGGYGTVYRGVLPDGREVAVKKLQREGTEA-EKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELITDKTK----LQWKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVD 1018          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.178e-47
Identity = 104/217 (47.93%), Postives = 145/217 (66.82%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL-RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHI-TTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            RF L  +  ATD FS++N LG+GGFG VYKG L +G+ VAVKRL +  +  G+++F+ EV +++   HRNL+ L GFC    E++LVY ++ N S+   +  + + SL  L W  R +I  G ARGL YLHE    KIIHRD+KA+NILLD E    V DFG A+L D  +T   T  + GT G++APEYL+ G+ S K+DV+ +G+MLLE+I+G+R
Sbjct:  340 RFDLGMVLAATDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTKG-SGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSL--LTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER 553          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
THE1_ARATH1.696e-4845.70Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
RLCK7_ARATH2.215e-4846.12Probable serine/threonine-protein kinase RLCKVII O... [more]
Y5487_ARATH3.779e-4847.20Probable LRR receptor-like serine/threonine-protei... [more]
Y2317_ARATH3.779e-4841.91Probable leucine-rich repeat receptor-like protein... [more]
Y1677_ARATH3.779e-4847.42Probable LRR receptor-like serine/threonine-protei... [more]
PSYR1_ARATH3.779e-4840.57Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
CRK37_ARATH6.446e-4843.80Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
RPK2_ARATH1.099e-4744.55LRR receptor-like serine/threonine-protein kinase ... [more]
Y1743_ARATH3.199e-4742.79Probable LRR receptor-like serine/threonine-protei... [more]
CRK39_ARATH4.178e-4747.93Putative cysteine-rich receptor-like protein kinas... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
back to top