FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: MKH1_SCHPO (MAP kinase kinase kinase mkh1 OS=Schizosaccharomyces pombe GN=mkh1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.311e-16
Identity = 64/221 (28.96%), Postives = 110/221 (49.77%), Query Frame = 3
Query:  168 QVATDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ---------FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYLSTGRS--SEKTDVFGYGIMLLELITGQR 791
            Q AT  +    ++G G +GKV+    +  G+L+AVK+++  +T  G               E+ +I+   H N++   GF  T T+  +   Y++ GS+   LR    +  P +    + ++     GLSYLH      IIHRD+KA N+L+D +    + DFG++K  D   D     ++ G++  +APE +       S K DV+  G ++LE++ G+R
Sbjct:  819 QNATFKWMKGELIGNGTYGKVFLAMNINTGELIAVKQVEIPQTINGRHDQLRKDIVDSINAEISMIADLDHLNIVQYLGFEKTETDISIFLEYVSGGSIGRCLR----NYGPFEEQLVRFVSRQVLYGLSYLHSK---GIIHRDLKADNLLIDFDGVCKISDFGISKHSDNVYDNDANLSMQGSIFWMAPEVIHNDHQGYSAKVDVWSLGCVVLEMLAGRR 1032          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EPHB2_CHICK (Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.311e-16
Identity = 64/210 (30.48%), Postives = 105/210 (50.00%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLA-DGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V  G L   GK    VA+K LK   T      F +E  I+    H N++ L G  T  +  +++  +M NGS+ S LR+       +      +   G A G+ YL    D   +HRD+ A NIL++      V DFGL++ +  D  D   T+A+ G   +   APE +   + +  +DV+ YGI++ E+++ G+R +
Sbjct:  642 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 845          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: YSK4_HUMAN (SPS1/STE20-related protein kinase YSK4 OS=Homo sapiens GN=YSK4 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.712e-16
Identity = 59/206 (28.64%), Postives = 108/206 (52.43%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGKLVAVKRLKEERTS--GGELQF---QTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY---KDTH--ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            ILG+G +G VY G  + G+L+AVK++  + ++    E ++   Q EV ++    H N++   G C       +   ++  GS++S +  R   LP + +    K  L   +G++YLHE+C   ++HRD+K  N++L       + DFG A+ + +     TH  +  ++HGT   +APE ++      K+D++  G  + E+ TG+
Sbjct: 1066 ILGKGAYGTVYCGLTSQGQLIAVKQVALDTSNKLAAEKEYRKLQEEVDLLKALKHVNIVAYLGTCLQENTVSIFMEFVPGGSISS-IINRFGPLPEMVFCKYTKQIL---QGVAYLHENC---VVHRDIKGNNVMLMPTGIIKLIDFGCARRLAWAGLNGTHSDMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGK 1264          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.712e-16
Identity = 62/219 (28.31%), Postives = 108/219 (49.32%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK--IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            L +FS   L+ AT+ FS +NI+       V+KGRL +G  VA+KR      S  +L F  E + +    H+ L+ L G+C    ++ LV  +MAN ++A RL +R+     +DW  R ++A   A  L Y    C+      + ++ A  +L DE+ +A +  FGL K                   I  + ++TG  + +  ++ +G +L+ L++G++
Sbjct:   35 LTKFSFSALKTATNHFSPENIVSDQTSDVVFKGRLQNGGFVAIKRFNNMAWSDPKL-FLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQRK--YQTMDWSIRLRVAYFVAEALDY----CNTAGFASYNNLSAYKVLFDEDGDACLSCFGLMK------------------EINNDQITTGSVNPENVIYRFGTVLVNLLSGKQ 228          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: MLTK_MOUSE (Mitogen-activated protein kinase kinase kinase MLT OS=Mus musculus GN=Mltk PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.712e-16
Identity = 60/212 (28.30%), Postives = 105/212 (49.53%), Query Frame = 3
Query:  165 LQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            +Q+  D        G G FG VY+ + ++  K VAVK+L         L+ + E +I+S+  HRN++   G         +V  Y + GS+   +   +S    +D       A   A+G+ YLH     K+IHRD+K+ N+++  +    + DFG ++  ++  TH++    GT   +APE + +   SE  D + YG++L E++T +  F
Sbjct:    9 VQIKFDDLQFFENCGGGSFGSVYRAKWISQDKEVAVKKL---------LKIEKEAEILSVLSHRNIIQFYGVILEPPNYGIVTEYASLGSLYDYINSNRSE--EMDMEHIMTWATDVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFHNH-TTHMSLV--GTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPF 206          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: MLTK_HUMAN (Mitogen-activated protein kinase kinase kinase MLT OS=Homo sapiens GN=MLTK PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.712e-16
Identity = 61/216 (28.24%), Postives = 106/216 (49.07%), Query Frame = 3
Query:  165 LQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLD----WPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            +Q+  D        G G FG VY+ + ++  K VAVK+L         L+ + E +I+S+  HRN++   G         +V  Y + GS+   +   +S    +D    W T        A+G+ YLH     K+IHRD+K+ N+++  +    + DFG ++  ++  TH++    GT   +APE + +   SE  D + YG++L E++T +  F
Sbjct:    9 VQIKFDDLQFFENCGGGSFGSVYRAKWISQDKEVAVKKL---------LKIEKEAEILSVLSHRNIIQFYGVILEPPNYGIVTEYASLGSLYDYINSNRSEEMDMDHIMTWAT------DVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFHNH-TTHMSLV--GTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPF 206          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: MATK_RAT (Megakaryocyte-associated tyrosine-protein kinase OS=Rattus norvegicus GN=Matk PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.712e-16
Identity = 69/202 (34.16%), Postives = 103/202 (50.99%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            +G G FG V +G    G+ VAVK +K + T+     F  E  +++   HRNL+ L G         +V  +++ G++ + LR R  +L  +      + AL  A G+ YL      K++HRD+ A NIL+ E+  A V DFGLAK    K    +      V   APE L  GR S K+DV+ +G++L E+ +  RA  P M
Sbjct:  200 IGEGEFGAVLQGEYL-GQKVAVKNIKCDVTAQA---FLDETAVMTKLQHRNLVRLLGVILH-HGLYIVMEHVSKGNLVNFLRTRGRAL--VSTSQLLQFALHVAEGMEYLESK---KLVHRDLAARNILVSEDLVAKVSDFGLAKAELRKGLDSSRL---PVKWTAPEALKNGRFSSKSDVWSFGVLLWEVFSYGRAPYPKM 388          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: VAB1_CAEEL (Ephrin receptor 1 OS=Caenorhabditis elegans GN=vab-1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.236e-16
Identity = 71/255 (27.84%), Postives = 119/255 (46.67%), Query Frame = 3
Query:   87 EFFFDVPAEDDSELQL------GQLKRFSLRELQVATDGFSNKNI-LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH-----RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHI-----APEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            EF FD+   D    Q+      G +    L +   A   +S  N  +GRGG G  Y+    +   VA+K LK   ++  + +F TE  I+    H N++ L G  T+    ++V  YMANGS+   LR        + W    ++  G A G+ YL    D   +H     RD+ A N+LLD E    + DFGL++ +  + + +        G I     APE ++  + +  +DV+ +G+++ E+ + G+R +
Sbjct:  682 EFTFDISPNDVFITQVIGGGEFGDVCLGGLSKNSPAAAKWSVSNTTMGRGGGGGGYESEPYE--TVAIKTLKSGSSAKAKAEFLTEATIMGQFSHPNVIRLIGVVTSAEPVMIVAEYMANGSLDQFLRNTDQRGEKVHWEKITEMLYGIASGMKYL---TDMGYVHRVSFLRDLAARNVLLDMELRCKIADFGLSRGVRSEGSSVEPEYTTNGGKIPVRWTAPEAITHRKFTPSSDVWSFGVVIWEVCSFGERPY 931          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RIPK4_HUMAN (Receptor-interacting serine/threonine-protein kinase 4 OS=Homo sapiens GN=RIPK4 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.236e-16
Identity = 65/210 (30.95%), Postives = 104/210 (49.52%), Query Frame = 3
Query:  186 FSNKNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITT--AVHGTVGHIAPEYL--STGRSSEKTDVFGYGIMLLELITGQRAF 797
            F+    +G GGFG+VYK R    K  +A+K          E ++   E K + MA  R +L + G C       LV  YM  GS+     E+  +  PL W  R +I   +A G+++LH    P ++H D+K ANILLD  +   + DFGLAK      +H  +   + GT+ ++ PE +   +     K DV+ + I++  ++T ++ F
Sbjct:   22 FTGWEKVGSGGFGQVYKVRHVHWKTWLAIKCSPSLHVDDRERMELLEEAKKMEMAKFRYILPVYGICREPVG--LVMEYMETGSL-----EKLLASEPLPWDLRFRIIHETAVGMNFLHCMAPP-LLHLDLKPANILLDAHYHVKISDFGLAKCNGLSHSHDLSMDGLFGTIAYLPPERIREKSRLFDTKHDVYSFAIVIWGVLTQKKPF 223          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PKN1_THETN (Probable serine/threonine-protein kinase Sps1 OS=Thermoanaerobacter tengcongensis GN=sps1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.236e-16
Identity = 60/202 (29.70%), Postives = 100/202 (49.50%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            +G GG  KVYK +     ++VA+K L+ E  +      +F+ E +  +   H N++G+           +V  Y+   ++   +RE      PL+     +IA    R L + H++   KIIHRD+K  NIL+ +E    V DFG+A+  +      T  V GT  + +PE        E+TD++  GI+L E++TG+  F+
Sbjct:   16 IGEGGMAKVYKAKCHLLNRIVAIKILRPEFAADENFVKKFKRESQAAASLSHPNIVGIYDVGQEGDIYYIVMEYVKGRTLKELIRENGG---PLEVKRAVEIASQVCRALDHAHKN---KIIHRDIKPQNILVTDEDVVKVTDFGIARAANGATITYTGDVIGTAYYFSPEQAKGSIVDERTDIYSLGIVLFEMLTGKVPFE 211          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MKH1_SCHPO1.311e-1628.96MAP kinase kinase kinase mkh1 OS=Schizosaccharomyc... [more]
EPHB2_CHICK1.311e-1630.48Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2... [more]
YSK4_HUMAN1.712e-1628.64SPS1/STE20-related protein kinase YSK4 OS=Homo sap... [more]
SSP_ARATH1.712e-1628.31Probable inactive receptor-like kinase SSP OS=Arab... [more]
MLTK_MOUSE1.712e-1628.30Mitogen-activated protein kinase kinase kinase MLT... [more]
MLTK_HUMAN1.712e-1628.24Mitogen-activated protein kinase kinase kinase MLT... [more]
MATK_RAT1.712e-1634.16Megakaryocyte-associated tyrosine-protein kinase O... [more]
VAB1_CAEEL2.236e-1627.84Ephrin receptor 1 OS=Caenorhabditis elegans GN=vab... [more]
RIPK4_HUMAN2.236e-1630.95Receptor-interacting serine/threonine-protein kina... [more]
PKN1_THETN2.236e-1629.70Probable serine/threonine-protein kinase Sps1 OS=T... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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