FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: FPS_FUJSV (Tyrosine-protein kinase transforming protein Fps OS=Fujinami sarcoma virus GN=V-FPS PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.814e-16
Identity = 66/195 (33.85%), Postives = 97/195 (49.74%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH-EHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD---YKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLE 773
            +GRG FG+V+ GRL AD   VAVK  +E      + +F  E +I+    H N++ L G CT      +V   +  G   S LR   S  P L      K+   +A G+ YL  +HC    IHRD+ A N L+ E+    + DFG+++  +   Y  T     +   V   APE L+ G  S ++DV+ +GI+L E
Sbjct:  618 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPELKAKFLQEARILKQCNHPNIVRLIGVCTQKQPIYIVMELVQGGDFLSFLR---SKGPRLKMKKLIKMMENAAAGMEYLESKHC----IHRDLAARNCLVTEKNTLKISDFGMSRQEEDGVYASTGGMKQI--PVKWTAPEALNYGWYSSESDVWSFGILLWE 803          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: BTKL_DROME (Tyrosine-protein kinase Btk29A OS=Drosophila melanogaster GN=Btk29A PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.814e-16
Identity = 61/193 (31.61%), Postives = 95/193 (49.22%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            LG G FG V +G+       AVK +KE   S  E  F  E K+++   H NL+ L G C+      +V  YM +GS+ + LR  + +L   +      + +  ++G++YL  H     IHRD+ A N L+  E    V DFGLA+ +       +      +    PE L+  R S K+DV+ YG+++ E+ T
Sbjct:  532 LGSGQFGVVRRGKWRGSIDTAVKMMKEGTMS--EDDFIEEAKVMTKLQHPNLVQLYGVCSKHRPIYIVTEYMKHGSLLNYLRRHEKTLIG-NMGLLLDMCIQVSKGMTYLERH---NYIHRDLAARNCLVGSENVVKVADFGLARYVLDDQYTSSGGTKFPIKWAPPEVLNYTRFSSKSDVWAYGVLMWEIFT 718          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: STK6_HUMAN (Serine/threonine-protein kinase 6 OS=Homo sapiens GN=AURKA PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.981e-16
Identity = 64/235 (27.23%), Postives = 103/235 (43.83%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL---KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            P  +  E    + K    ++ Q A + F     LG+G FG VY  R    K +   ++    +   +G E Q + EV+I S   H N+L L G+    T   L+  Y   G+V   L++    L   D           A  LSY H     ++IHRD+K  N+LL    E  + DFG +    +  +   T + GT+ ++ PE +      EK D++  G++  E + G+  F+
Sbjct:  106 PENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 330          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EPHB2_COTJA (Ephrin type-B receptor 2 OS=Coturnix coturnix japonica GN=EPHB2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.981e-16
Identity = 63/210 (30.00%), Postives = 104/210 (49.52%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLA-DGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V  G L   GK    VA+K LK   T      F +E  I+    H N++ L G  T  +  +++  +M NGS+ S LR+       +      +   G A G+ YL    D   +HRD+ A N L++      V DFGL++ +  D  D   T+A+ G   +   APE +   + +  +DV+ YGI++ E+++ G+R +
Sbjct:  625 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL---ADMNYVHRDLAARNTLVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 828          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y9849_DICDI (Probable serine/threonine-protein kinase DDB_G0278535 OS=Dictyostelium discoideum GN=DDB_G0278535 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 61/197 (30.96%), Postives = 102/197 (51.78%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKL-LVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSS---EKTDVFGYGIMLLELIT 782
            LG G  GKVYKG L  GK VAVK LK   T     +F+ E +I+     + ++   G C  +  KL +V  Y +  S+   +  ++  +    W    +  +    G+  LH +  P+I+HRD K+ N+L++E++E  V DFGL++     +    + + GT  + +PE ++ G  S    K+D++  GI+  EL+T
Sbjct:  535 LGSGSSGKVYKG-LYKGKEVAVKVLKSITTQSQLEEFKKEFQIMGSIRSQFMVTFYGAC--IEPKLCMVMEYCSRDSLYHVMNTKKYDI---GWDRFFQFTMQMTLGVQCLH-NWTPQIVHRDFKSLNLLVNEDWECKVSDFGLSRFNTADNLETLSKIRGTFAYCSPE-VAVGNGSLYTTKSDIYSIGIVFWELVT 723          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RMIL_AVII1 (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian retrovirus IC10 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYL---STGRSSEKTDVFGYGIMLLELITGQ 788
            +G G FG VYKG+      VAVK L     +  +LQ F+ EV ++    H N+L   G+ +T  +  +V ++    S+   L   ++    +       IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G++  +APE +        S ++DV+ +GI+L EL+TGQ
Sbjct:   73 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 263          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RMIL_AVEVR (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian rous-associated virus type 1 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYL---STGRSSEKTDVFGYGIMLLELITGQ 788
            +G G FG VYKG+      VAVK L     +  +LQ F+ EV ++    H N+L   G+ +T  +  +V ++    S+   L   ++    +       IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G++  +APE +        S ++DV+ +GI+L EL+TGQ
Sbjct:   89 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 279          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RK_BOVIN (Rhodopsin kinase OS=Bos taurus GN=GRK1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 65/209 (31.10%), Postives = 94/209 (44.98%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            D F +  +LGRGGFG+V+  ++ A GKL A K+L ++R     G      E KI++    R ++ L     T T+  LV   M  G +   +       P    P           GL +LH+     II+RD+K  N+LLD++    + D GLA  +    T  T    GT G +APE L         D F  G+ L E+I  +  F
Sbjct:  185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RIPK3_HUMAN (Receptor-interacting serine/threonine-protein kinase 3 OS=Homo sapiens GN=RIPK3 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 63/215 (29.30%), Postives = 113/215 (52.56%), Query Frame = 3
Query:  171 VATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVT-----EKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPE-YLSTGR-SSEKTDVFGYGIMLLELITGQ 788
            V+ +   N+ ++G+GGFG V++ +    G  VAVK +  +  S        EVK ++   +  +L L G    V      +  LV ++M NGS++  L+    S  P  WP   ++      G+ YLH+  +P ++HRD+K +N+LLD E    + DFGL+       +   +    GT+G++APE +++  R +S  +DV+ +GI++  ++ G+
Sbjct:   16 VSIEELENQELVGKGGFGTVFRAQHRKWGYDVAVKIVNSKAIS-------REVKAMASLDNEFVLRLEGVIEKVNWDQDPKPALVTKFMENGSLSGLLQ----SQCPRPWPLLCRLLKEVVLGMFYLHDQ-NPVLLHRDLKPSNVLLDPELHVKLADFGLSTFQGGSQSGTGSGEPGGTLGYLAPELFVNVNRKASTASDVYSFGILMWAVLAGR 218          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PLK4_DROVI (Serine/threonine-protein kinase PLK4 OS=Drosophila virilis GN=SAK PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 63/211 (29.86%), Postives = 100/211 (47.39%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            D +  +++LG+GGF  VYK + L   + VA+K + ++   G  L  + + EV+I S   H ++L L  F        L+     NG +   + ++     P        I      GL YLH H    I+HRD+  +N+LL ++    + DFGLA  +   D  H+T    GT  +I+PE +S        D++  G ML  L+ G+  FD
Sbjct:   12 DEYEVQHLLGKGGFACVYKAKCLRSHQNVAIKMIDKKLIQGSGLSNRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLILELADNGELHRYMNQQMKR--PFTEQEAASILRQVVDGLLYLHSH---NIMHRDISMSNLLLSKDMHVKIADFGLATQLKRPDERHMTMC--GTPNYISPEVVSHQSHGLPADLWSVGCMLYTLLVGRPPFD 215          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FPS_FUJSV3.814e-1633.85Tyrosine-protein kinase transforming protein Fps O... [more]
BTKL_DROME3.814e-1631.61Tyrosine-protein kinase Btk29A OS=Drosophila melan... [more]
STK6_HUMAN4.981e-1627.23Serine/threonine-protein kinase 6 OS=Homo sapiens ... [more]
EPHB2_COTJA4.981e-1630.00Ephrin type-B receptor 2 OS=Coturnix coturnix japo... [more]
Y9849_DICDI6.506e-1630.96Probable serine/threonine-protein kinase DDB_G0278... [more]
RMIL_AVII16.506e-1632.50Serine/threonine-protein kinase-transforming prote... [more]
RMIL_AVEVR6.506e-1632.50Serine/threonine-protein kinase-transforming prote... [more]
RK_BOVIN6.506e-1631.10Rhodopsin kinase OS=Bos taurus GN=GRK1 PE=1 SV=1[more]
RIPK3_HUMAN6.506e-1629.30Receptor-interacting serine/threonine-protein kina... [more]
PLK4_DROVI6.506e-1629.86Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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