FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PKN2_CLOPE (Probable serine/threonine-protein kinase CPE1738 OS=Clostridium perfringens GN=CPE1738 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 62/202 (30.69%), Postives = 100/202 (49.50%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            +G GG   VYK R     + VAVK LK+E  +  E+  +F+ E   I+   + N++ +    T      +V  Y+   ++   ++E+ +    L +     I +  A+ L   H+     IIHRDVK  NIL+ EE    V DFG+AK MD      T +V G+  + +PE      +  +TD++  GI+L E++TG   F+
Sbjct:   16 VGEGGMSFVYKARCRKLNRFVAVKILKDEFKNNEEIVRRFKKEATAIANLSNPNVVNVLDVGTQDDINYIVMEYVEGKTLKDIIKEKGA----LPYEVAISIGIKVAKALECAHKS---GIIHRDVKPQNILVTEEGVVKVTDFGIAKSMDSSTIAHTNSVMGSAHYFSPEQAKGTYTDYRTDLYSLGIVLYEMVTGVVPFN 210          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PKN1_RAT (Serine/threonine-protein kinase N1 OS=Rattus norvegicus GN=Pkn1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 70/226 (30.97%), Postives = 105/226 (46.46%), Query Frame = 3
Query:  156 LRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVK----------IISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            LR+  +  + F    +LGRG FGKV      + G+L A+K LK+     G++  + EV+           ++ A H  L+ L G   T      V  Y A G +   +     S P   + +   +      GL +LHEH   KI++RD+K  N+LLD E    + DFGL K  M Y D   T+   GT   +APE L+    +   D +G G+ L E++ G+  F
Sbjct:  609 LRKSPLTLEDFKFLAVLGRGHFGKVLLSEFHSSGELFAIKALKK-----GDIVARDEVESLMCEKRILATVTRAGHPFLVNLFGCFQTPEHVCFVMEYSAGGDLMLHIHSDVFSEPRAGFYSACVVL-----GLQFLHEH---KIVYRDLKLDNLLLDTEGYVKIADFGLCKEGMGYGDR--TSTFCGTPEFLAPEVLTDTSYTRAVDWWGLGVFLYEMLVGESPF 819          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PKN1_MOUSE (Serine/threonine-protein kinase N1 OS=Mus musculus GN=Pkn1 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 70/226 (30.97%), Postives = 106/226 (46.90%), Query Frame = 3
Query:  156 LRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVK----------IISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            LR+  +  + F    +LGRG FGKV      + G+L A+K LK+     G++  + EV+           ++ A H  L+ L G   T      V  Y A G +   +     S P   + +   +      GL +LHEH   KI++RD+K  N+LLD E    + DFGL K  M Y D   T+   GT   +APE L+    +   D +G G++L E++ G+  F
Sbjct:  609 LRKSPLTLEDFKFLAVLGRGHFGKVLLSEFRSSGELFAIKALKK-----GDIVARDEVESLMCEKRILAAVTRAGHPFLVNLFGCFQTPEHVCFVMEYSAGGDLMLHIHSDVFSEPRAVFYSACVVL-----GLQFLHEH---KIVYRDLKLDNLLLDTEGYVKIADFGLCKEGMGYGDR--TSTFCGTPEFLAPEVLTDTSYTRAVDWWGLGVLLYEMLVGESPF 819          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PATS1_DICDI (Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum GN=pats1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 74/228 (32.46%), Postives = 117/228 (51.32%), Query Frame = 3
Query:  168 QVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLK--EERTSGGEL----------QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFE-----AVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLS-TGRSSEKTDVFGYGIMLLELITGQRAF 797
            ++  D    + ++G GG   VY+ R   G+ VAVK+LK  E   S  E+          +F+ E  ++S   H N++ L G C  +    +V  Y+ +G++ S L + +       W  R K+AL  + G+++LH    P IIHRD+K+ NILL    E     A V DFGL+ L   + T     V   +  +APE L+ T  +S +TDV+ +G++L EL+T +  F
Sbjct: 2241 KIPFDQLMIEELIGEGGAALVYRARW-QGQTVAVKKLKTIENLDSPIEINDISLSKAFNEFRRECWVMSELEHPNIVQLKGLC--LDPLCIVTEYLPHGNLYSFLHKPEMEF---SWLFRLKVALDISSGMAFLHSSTPP-IIHRDLKSPNILLASINENAQTIAKVVDFGLSGL---QHTITNRGVENPLW-LAPEILNKTKEASTQTDVYAFGVILWELVTRKDYF 2457          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: LCK_AOTNA (Proto-oncogene tyrosine-protein kinase LCK OS=Aotus nancymaae GN=LCK PE=2 SV=4)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 61/203 (30.05%), Postives = 100/203 (49.26%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKL-LVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            LG G FG+V+ G   D   VAVK LK+   S     F  E  ++    H+ L+ L  +     E + ++  YM NGS+   L+        ++      +A   A G++++ E      IHRD++AANIL+ +     + DFGLA+L++  +          +   APE ++ G  + K+DV+ +GI+L E++T  R   P M
Sbjct:  251 LGAGQFGEVWMGYYNDHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 444          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: FGFR1_DUGJA (Fibroblast growth factor receptor 1 OS=Dugesia japonica GN=FGFR1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 74/259 (28.57%), Postives = 119/259 (45.95%), Query Frame = 3
Query:   69 RRTRPHEFF--FDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI------------ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            R++   EFF  ++ P +   E    +LK              +NK  LG G FG VY+G   D         VAVK ++++ +      F  E++I+  +  H N++ L G CT      ++      G++   +R +        +   KKI            +L  ARG++YL       ++HRD+ A NIL+ E FE  + DFGL +++DY     T  +   V  +APE L   + + K+DV+ YGI+L E+ T
Sbjct:  524 RKSSSFEFFSLYEFPCDAKWEFPREKLK-------------ITNKK-LGEGAFGMVYEGIANDIGNRSNPIKVAVKMMRDDFSDSNVHDFVKEMEIMKHIGRHPNVIQLLGLCTQKGPLRVIVELAPYGNLRDFVRAKNKK-----YSKSKKIIGNFTSSILCTYSLQIARGMTYLASR---SVVHRDLSARNILVGEHFEMKIADFGLTRIVDYYYRKKTDGIL-PVKWMAPEALLEKKYTTKSDVWSYGILLWEIFT 759          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EPHB5_CHICK (Ephrin type-B receptor 5 OS=Gallus gallus GN=EPHB5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 65/210 (30.95%), Postives = 107/210 (50.95%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLAD-GK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHIT-TAVHG---TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V  GRL   GK    VA+K LK   T     +F +E  I+    H N++ L G  T     ++V  +M NGS+ S LR+++     L      +   G A G+ YL    D   +HRD+ A NIL++      V DFGL++ ++   ++ T T   G    +   APE +   + +  +DV+ YGI++ E+++ G+R +
Sbjct:  640 EEVIGSGEFGEVCFGRLKHPGKREYTVAIKTLKSGYTDEQRREFLSEASIMGQFEHPNVIHLEGVVTKSRPVMIVTEFMENGSLDSFLRQKEGQFSVLQLVGMLR---GIAAGMRYL---SDMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDASNPTYTGALGCKIPIRWTAPEAVQYRKFTSSSDVWSYGIVMWEVMSYGERPY 843          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: BRAF1_MOUSE (B-Raf proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Braf PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYL---STGRSSEKTDVFGYGIMLLELITGQ 788
            +G G FG VYKG+      VAVK L     +  +LQ F+ EV ++    H N+L   G+ +T  +  +V ++    S+   L   ++    +       IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G++  +APE +        S ++DV+ +GI+L EL+TGQ
Sbjct:  500 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 690          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: BRAF1_HUMAN (B-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=BRAF PE=1 SV=4)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYL---STGRSSEKTDVFGYGIMLLELITGQ 788
            +G G FG VYKG+      VAVK L     +  +LQ F+ EV ++    H N+L   G+ +T  +  +V ++    S+   L   ++    +       IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G++  +APE +        S ++DV+ +GI+L EL+TGQ
Sbjct:  463 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 653          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: BRAF1_COTJA (B-Raf proto-oncogene serine/threonine-protein kinase OS=Coturnix coturnix japonica GN=BRAF PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYL---STGRSSEKTDVFGYGIMLLELITGQ 788
            +G G FG VYKG+      VAVK L     +  +LQ F+ EV ++    H N+L   G+ +T  +  +V ++    S+   L   ++    +       IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G++  +APE +        S ++DV+ +GI+L EL+TGQ
Sbjct:  503 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 693          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PKN2_CLOPE6.506e-1630.69Probable serine/threonine-protein kinase CPE1738 O... [more]
PKN1_RAT6.506e-1630.97Serine/threonine-protein kinase N1 OS=Rattus norve... [more]
PKN1_MOUSE6.506e-1630.97Serine/threonine-protein kinase N1 OS=Mus musculus... [more]
PATS1_DICDI6.506e-1632.46Probable serine/threonine-protein kinase pats1 OS=... [more]
LCK_AOTNA6.506e-1630.05Proto-oncogene tyrosine-protein kinase LCK OS=Aotu... [more]
FGFR1_DUGJA6.506e-1628.57Fibroblast growth factor receptor 1 OS=Dugesia jap... [more]
EPHB5_CHICK6.506e-1630.95Ephrin type-B receptor 5 OS=Gallus gallus GN=EPHB5... [more]
BRAF1_MOUSE6.506e-1632.50B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_HUMAN6.506e-1632.50B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_COTJA6.506e-1632.50B-Raf proto-oncogene serine/threonine-protein kina... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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