FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: BRAF1_CHICK (B-Raf proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=BRAF PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.506e-16
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYL---STGRSSEKTDVFGYGIMLLELITGQ 788
            +G G FG VYKG+      VAVK L     +  +LQ F+ EV ++    H N+L   G+ +T  +  +V ++    S+   L   ++    +       IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G++  +APE +        S ++DV+ +GI+L EL+TGQ
Sbjct:  503 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 693          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y8901_DICDI (Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.497e-16
Identity = 58/203 (28.57%), Postives = 101/203 (49.75%), Query Frame = 3
Query:  198 NILGRGGFGKVYKG-RLADGKLVAVKRLK----EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSA-RGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITG 785
            +I+G+GGFG VYKG     G   A+K++K    ++  S  ++    E+ ++ +  H N++       + +   +V  ++ NGS+  ++ +R   LP     +   + +     GL YLH      +IHRD+KAAN+L+  +    + DFG+A K+ D    +      GT   +APE +     S   DV+  G  ++EL+TG
Sbjct:   26 DIIGKGGFGVVYKGLHKTKGYFSAIKKIKIMKKKKLQSESQISLMAEINLLKVLSHHNIVRYYEHIPSSSHSYIVMEFIENGSL-EKIIKRHGLLPE----SLVTVYIAQVLNGLEYLHRQ---GVIHRDIKAANLLISTDGSIKLADFGVATKVSDLSSDNPDDTFAGTPYWMAPEVIQMQGISTACDVWSLGCTIIELLTG 220          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: STK6_PIG (Serine/threonine-protein kinase 6 OS=Sus scrofa GN=AURKA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.497e-16
Identity = 63/235 (26.81%), Postives = 103/235 (43.83%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL---KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            P  +  +    + K    ++ Q A + F     LG+G FG VY  R    K +   ++    +   +G E Q + EV+I S   H N+L L G+    T   L+  Y   G+V   L++    L   D           A  LSY H     ++IHRD+K  N+LL    E  + DFG +    +  +   T + GT+ ++ PE +      EK D++  G++  E + G+  F+
Sbjct:  106 PGNNPEKEAASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGAVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 330          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: MUSK_CHICK (Muscle, skeletal receptor tyrosine protein kinase OS=Gallus gallus GN=MUSK PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.497e-16
Identity = 71/264 (26.89%), Postives = 117/264 (44.32%), Query Frame = 3
Query:   75 TRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSS----------------LPPLDWPTRKKIALGS--ARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            T P E   D    +    ++  L    L  L+   +       +G G FG+V++ R A G L       VAVK LKEE ++  +  FQ E  +++   + N++ L G C       L++ YMA G +   LR+R                   L PL      ++ +    A G++YL E    K +HRD+   N L+ E     + DFGL++ M   DY   +   A+   +  + PE +   R + ++DV+ YG++L E+ +
Sbjct:  618 TLPSELLLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEYLRDRSPRNLCSLVQGGLEARACLLNPLALCCTSQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNMYSADYYKANENDAI--PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 875          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: LIMK2_CHICK (LIM domain kinase 2 OS=Gallus gallus GN=LIMK2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.497e-16
Identity = 70/223 (31.39%), Postives = 102/223 (45.74%), Query Frame = 3
Query:  201 ILGRGGFGKVYK-GRLADGKLVAVKRLK--EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-------------------MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDP 803
            +LG+G FG+  K    A GK++ +K L   +E T   +  F TEVK++    H N+L   G      +  L+  Y+  G++   LR       P  W  +   A G A G++YLH  C   IIHRD+ + N L+  +   VV DFGL++L                   +   D      V G    +APE L+     E  D+F +GI+L E+I GQ   DP
Sbjct:  336 VLGKGFFGQAIKVTHKATGKVMVMKELIRCDEET---QKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRNAD----PFPWQQKVSFAKGIASGMAYLHSMC---IIHRDLNSHNCLIKLDKTVVVADFGLSRLIVEERKKPTLEKPSAKKRTLRKSDRKKRYTVVGNPYWMAPEMLNGQSYDETVDIFSFGIVLCEII-GQVYADP 547          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: LIMK2_BOVIN (LIM domain kinase 2 OS=Bos taurus GN=LIMK2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.497e-16
Identity = 70/223 (31.39%), Postives = 104/223 (46.64%), Query Frame = 3
Query:  201 ILGRGGFGKVYK-GRLADGKLVAVKRLK--EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-------------------MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDP 803
            +LG+G FG+  K    A GK++ +  L   +E T   +  F TEVK++    H N+L   G      +  L+  Y+  G++   LR    ++ P  W  + + A G A G++YLH  C   IIHRD+ + N L+  +   VV DFGL++L                   +   D      V G    +APE L+     E  DVF +GI+L E+I GQ   DP
Sbjct:  336 VLGKGFFGQAIKVTHKATGKVMVMNELIRCDEET---QKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLR----NVDPFPWQQKVRFAKGIASGMAYLHSMC---IIHRDLNSHNCLIKLDKTVVVADFGLSRLIVEERKKPPVEKATTKKRTLRKSDRKKRYTVVGNPYWMAPEMLNGKSYDETVDVFSFGIVLCEII-GQVYADP 547          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EPHB3_DANRE (Ephrin type-B receptor 3 (Fragment) OS=Danio rerio GN=ephb3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.497e-16
Identity = 64/212 (30.19%), Postives = 108/212 (50.94%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLADG----KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVAS--RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--YKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V +GRL         VA+K LK   T      F +E  I+    H N++ L G  T     L+V  +M NG++ S  RL + + ++  L    R     G A G+ YL    D   +HRD+ A N+L++      V DFGL++ +D    D   T+++ G   +   APE ++  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  190 EEVIGAGEFGEVCRGRLKQAGRKETTVAIKTLKAGYTEHQRRDFLSEASIMGQFDHPNVIHLEGVLTRSCPVLIVTEFMENGALDSFLRLNDGRFTVTQLVGMLR-----GIAAGMKYL---SDMNYVHRDLAARNVLVNSNLVCKVSDFGLSRFLDDNSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVMSFGERPY 393          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CDC15_YEAST (Cell division control protein 15 OS=Saccharomyces cerevisiae GN=CDC15 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 8.497e-16
Identity = 68/225 (30.22%), Postives = 112/225 (49.78%), Query Frame = 3
Query:  114 DDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            D   + L  ++R S + +Q     +  K ++GRG +G VYK       ++VA+K +  E     EL     E+ ++    H N++   GF     E  ++  Y ANGS+  RL  R S+   L     K     +  GL YLH      +IHRD+KAANILL  +    + DFG++ +++   + +T A  GT+  +APE L    +S  +D++  G  ++E++T
Sbjct:    6 DTDRVNLTPIQRASEKSVQ-----YHLKQVIGRGSYGVVYKAINKHTDQVVAIKEVVYENDE--ELNDIMAEISLLKNLNHNNIVKYHGFIRKSYELYILLEYCANGSLR-RLISRSST--GLSENESKTYVTQTLLGLKYLHGE---GVIHRDIKAANILLSADNTVKLADFGVSTIVN--SSALTLA--GTLNWMAPEILGNRGASTLSDIWSLGATVVEMLT 213          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: AURKC_MOUSE (Serine/threonine-protein kinase 13 OS=Mus musculus GN=Aurkc PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.497e-16
Identity = 65/222 (29.28%), Postives = 105/222 (47.30%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK-LVAVKRL--KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            K F++ + ++          LGRG FG+VY  RL +   +VA+K L   E    G E Q + EV+I +   HRN+L L  +    T   L+  Y   G +   L+  Q     LD      I    +  L+Y HE    K+IHRD+K  N+LL    E  + DFG +    +  +     + GT+ ++ PE ++    +E  D++  G++  EL+ G+  F+
Sbjct:    9 KHFTINDFEIGRP-------LGRGKFGRVYLARLKENHFIVALKVLFKSEIEKEGLEHQLRREVEIQAHLQHRNILRLYNYFYDDTRIYLILEYAPGGELYKELQRHQK----LDQQRTATIIQELSDALTYCHEK---KVIHRDIKPENLLLGLNGEVKISDFGWSV---HTPSLRRKTMCGTLDYLPPEMIAQKPYNEMVDLWCIGVLCYELLVGKPPFE 213          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: STK6_BOVIN (Serine/threonine-protein kinase 6 OS=Bos taurus GN=AURKA PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.110e-15
Identity = 63/235 (26.81%), Postives = 103/235 (43.83%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL---KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            P  +  +    + K    ++ Q A + F     LG+G FG VY  R    K +   ++    +   +G E Q + EV+I S   H N+L L G+    T   L+  Y   G+V   L++    L   D           A  LSY H     ++IHRD+K  N+LL    E  + DFG +    +  +   T + GT+ ++ PE +      EK D++  G++  E + G+  F+
Sbjct:  106 PGNNPEKEVASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGAVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 330          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BRAF1_CHICK6.506e-1632.50B-Raf proto-oncogene serine/threonine-protein kina... [more]
Y8901_DICDI8.497e-1628.57Probable serine/threonine-protein kinase DDB_G0278... [more]
STK6_PIG8.497e-1626.81Serine/threonine-protein kinase 6 OS=Sus scrofa GN... [more]
MUSK_CHICK8.497e-1626.89Muscle, skeletal receptor tyrosine protein kinase ... [more]
LIMK2_CHICK8.497e-1631.39LIM domain kinase 2 OS=Gallus gallus GN=LIMK2 PE=2... [more]
LIMK2_BOVIN8.497e-1631.39LIM domain kinase 2 OS=Bos taurus GN=LIMK2 PE=2 SV... [more]
EPHB3_DANRE8.497e-1630.19Ephrin type-B receptor 3 (Fragment) OS=Danio rerio... [more]
CDC15_YEAST8.497e-1630.22Cell division control protein 15 OS=Saccharomyces ... [more]
AURKC_MOUSE8.497e-1629.28Serine/threonine-protein kinase 13 OS=Mus musculus... [more]
STK6_BOVIN1.110e-1526.81Serine/threonine-protein kinase 6 OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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