FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: SPK1_DUGTI (Tyrosine-protein kinase SPK-1 OS=Dugesia tigrina PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.110e-15
Identity = 58/211 (27.49%), Postives = 100/211 (47.39%), Query Frame = 3
Query:  159 RELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEK--LLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            +++++  +     N +GRG FG V++ +      VA K L+  +      +F  E KI+    HR ++ L G CT   +   L++  YM NGS+   L+        L+        +  + G++YL      K++HRD++A NIL+  +    V DFGL +L D          +       APE   +   + K+DV+ YGI++ E++T
Sbjct:  211 QDIEINRENIEILNEIGRGFFGSVHRAKWGRSYEVAAKMLQSSKAE--REKFVLEAKIMHKLRHRKIVELLGVCTEPQDMPMLIIVEYMKNGSLKEYLKTPDGKKTNLNQMVHMMAEI--SEGMAYLESE---KVVHRDLRADNILVANDLTRKVADFGLTELTDGSLGDQEKKTLRFPYKWTAPEAAKSKVFTSKSDVWSYGIVMFEILT 414          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PKN1_HUMAN (Serine/threonine-protein kinase N1 OS=Homo sapiens GN=PKN1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.110e-15
Identity = 70/226 (30.97%), Postives = 105/226 (46.46%), Query Frame = 3
Query:  156 LRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVK----------IISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            LR+  +  + F    +LGRG FGKV        G+L A+K LK+     G++  + EV+           ++ A H  L+ L G   T      V  Y A G +   +     S P   + +   +      GL +LHEH   KI++RD+K  N+LLD E    + DFGL K  M Y D   T+   GT   +APE L+    +   D +G G++L E++ G+  F
Sbjct:  605 LRKSPLTLEDFKFLAVLGRGHFGKVLLSEFRPSGELFAIKALKK-----GDIVARDEVESLMCEKRILAAVTSAGHPFLVNLFGCFQTPEHVCFVMEYSAGGDLMLHIHSDVFSEPRAIFYSACVVL-----GLQFLHEH---KIVYRDLKLDNLLLDTEGYVKIADFGLCKEGMGYGDR--TSTFCGTPEFLAPEVLTDTSYTRAVDWWGLGVLLYEMLVGESPF 815          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: MUSK_RAT (Muscle, skeletal receptor tyrosine protein kinase OS=Rattus norvegicus GN=Musk PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.110e-15
Identity = 71/266 (26.69%), Postives = 116/266 (43.61%), Query Frame = 3
Query:   75 TRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANG--------------------SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            T P E   D    +    ++  L    L  L+   +       +G G FG+V++ R A G L       VAVK LKEE ++  +  FQ E  +++   + N++ L G C       L++ YMA G                     +++R R      PPL    +  IA   A G++YL E    K +HRD+   N L+ E     + DFGL++ +   DY       A+   +  + PE +   R + ++DV+ YG++L E+ +
Sbjct:  537 TLPSELLLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI--PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 796          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EPHB4_MOUSE (Ephrin type-B receptor 4 OS=Mus musculus GN=Ephb4 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.110e-15
Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRL-ADGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVAS--RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--YKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V +GRL A GK    VA+K LK   T     +F +E  I+    H N++ L G  T     +++  +M NG++ S  RL + Q ++  L    R     G A G+ YL E      +HRD+ A NIL++      V DFGL++ ++    D   T+++ G  ++   APE ++  + +  +D + YGI++ E+++ G+R +
Sbjct:  618 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSVPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKISIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY 821          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EPHB3_XENLA (Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.110e-15
Identity = 62/210 (29.52%), Postives = 104/210 (49.52%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLADG----KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--YKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V +G+L       + VA+K LK   T      F  E  I+    H N++ L G  T     +++  +M NG++ S LR        +       I  G A G+ YL E      +HRD+ A NIL++      V DFGL++ ++    D   T+A+ G   +   APE +S  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  612 EEVIGAGEFGEVCRGKLKQAGRREQFVAIKTLKAGYTEQQRRDFLGEASIMGQFDHPNIIRLEGVVTRSRPVMILTEFMENGALDSFLRMNDGQFTVIQ---LVGILRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLENSRSDPTYTSALGGKIPIRWTAPEAISYRKFTSASDVWSYGIVMWEVMSYGERPY 815          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EPHA3_MOUSE (Ephrin type-A receptor 3 OS=Mus musculus GN=Epha3 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.110e-15
Identity = 65/209 (31.10%), Postives = 104/209 (49.76%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            ++G G FG+V  GRL   KL       VA+K LK   T      F  E  I+    H N++ L G  T    +++V  YM NGS+ S LR+  +    +      +   G A G+ YL    D   +HRD+ A NIL++      V DFGL++++  D +  + T      +   +PE +S  + +  +DV+ YGI+L E+++ G+R +
Sbjct:  626 VVGAGEFGEVCSGRL---KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPEMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAMSYRKFTSASDVWSYGIVLWEVMSYGERPY 825          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EPB1A_XENLA (Ephrin type-B receptor 1-A OS=Xenopus laevis GN=ephb1-A PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.110e-15
Identity = 64/213 (30.05%), Postives = 107/213 (50.23%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+VYKGRL   KL       VA+K LK   +      F +E  I+    H N++ L G  T     +++  +M NG++ S LR+       +      +   G A G+ YL E      +HRD+ A NIL++      V DFGL++ +  D  D   T+++ G   V   A E ++  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  623 EEVIGAGEFGEVYKGRL---KLPSKREISVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAQEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 826          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: ABL_DROME (Tyrosine-protein kinase Abl OS=Drosophila melanogaster GN=Abl PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.110e-15
Identity = 68/209 (32.54%), Postives = 103/209 (49.28%), Query Frame = 3
Query:  162 ELQVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            E ++       K+ LG G +G+VY+      G  VAVK LKE+  +  +  F  E  I+    H NL+ L G CT      ++  +M++G++   LR   +    LD      +A   A G+SYL        IHRD+ A N L+ +     V DFGLA+LM   DT+   A     +   APE L+  + S K+DV+ +G++L E+ T
Sbjct:  363 EWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKD--FLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRS--AGRETLDAVALLYMATQIASGMSYLESR---NYIHRDLAARNCLVGDNKLVKVADFGLARLM-RDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIAT 563          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: STK_HYDAT (Tyrosine-protein kinase STK OS=Hydra attenuata GN=STK PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.449e-15
Identity = 63/202 (31.19%), Postives = 97/202 (48.02%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            LG G FG+V+ G   +   VAVK LK    S     F  E  ++    H++L+ L   C+      +V  YM+ GS+   L + +     L  PT   +A   A G+++L        IHRD+ A NIL+ E +   V DFGLA+L++  +          +   APE     R + K+DV+ +GI++ E++T  R   P M
Sbjct:  246 LGAGQFGEVWAGVWNNTTQVAVKTLKPGTMSPAS--FLDEAGVMKKLRHKHLVQLYAICSDREPIYIVTEYMSGGSLLDYLSKGEGV--NLQLPTLIDMAAQVASGMAFLEAQ---GYIHRDLAARNILVGENYICKVADFGLARLIEDDEYTAHEGAKFPIKWTAPEAALYNRFTIKSDVWSFGILMAEIVTKGRIPYPGM 440          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PLK4_DROSI (Serine/threonine-protein kinase PLK4 OS=Drosophila simulans GN=SAK PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.449e-15
Identity = 66/211 (31.28%), Postives = 97/211 (45.97%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            + +  +++LG+GGF  VYK R L   + VA+K + ++   G  L  + + EV+I S   H ++L L  F        LV     NG +    R       P        I      GL YLH H    I+HRD+  +N+LL  E    + DFGLA  +   D  H+T    GT  +I+PE +S        DV+  G ML  L+ G+  F+
Sbjct:   12 EDYEVQHLLGKGGFATVYKARCLHTHQDVAIKMIDKKLIQGTGLTSRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLVLELAHNGELH---RYMNHIARPFTETEAASILKQVVAGLLYLHSH---NIMHRDISLSNLLLSREMHVKIADFGLATQLKRPDERHMTMC--GTPNYISPEVVSRSSHGLPADVWSVGCMLYTLLVGRPPFE 214          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SPK1_DUGTI1.110e-1527.49Tyrosine-protein kinase SPK-1 OS=Dugesia tigrina P... [more]
PKN1_HUMAN1.110e-1530.97Serine/threonine-protein kinase N1 OS=Homo sapiens... [more]
MUSK_RAT1.110e-1526.69Muscle, skeletal receptor tyrosine protein kinase ... [more]
EPHB4_MOUSE1.110e-1530.66Ephrin type-B receptor 4 OS=Mus musculus GN=Ephb4 ... [more]
EPHB3_XENLA1.110e-1529.52Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb... [more]
EPHA3_MOUSE1.110e-1531.10Ephrin type-A receptor 3 OS=Mus musculus GN=Epha3 ... [more]
EPB1A_XENLA1.110e-1530.05Ephrin type-B receptor 1-A OS=Xenopus laevis GN=ep... [more]
ABL_DROME1.110e-1532.54Tyrosine-protein kinase Abl OS=Drosophila melanoga... [more]
STK_HYDAT1.449e-1531.19Tyrosine-protein kinase STK OS=Hydra attenuata GN=... [more]
PLK4_DROSI1.449e-1531.28Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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