FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PLK4_DROMO (Serine/threonine-protein kinase PLK4 OS=Drosophila mojavensis GN=SAK PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.449e-15
Identity = 63/211 (29.86%), Postives = 99/211 (46.92%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            D +  +++LG+GGF  VYK + L   + VA+K + ++   G  L  + + EV I S   H ++L L  F        L+     NG +   + ++     P        I      GL YLH H    I+HRD+  +N+LL ++    + DFGLA  +   D  H+T    GT  +I+PE +S        D++  G ML  L+ G+  FD
Sbjct:   12 DEYEVQHLLGKGGFACVYKAKCLRTHQNVAIKMIDKKLIQGSGLSNRVRQEVDIHSRLKHPSVLQLYTFFQDANYVYLILELADNGELHRYMNQQMKR--PFTEDEASSILRQVVDGLLYLHSH---NIMHRDISLSNLLLSKDMHVKIADFGLATQLKRPDERHMTMC--GTPNYISPEVVSHMSHGLPADLWSVGCMLYTLLVGRPPFD 215          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: MUSK_MOUSE (Muscle, skeletal receptor tyrosine protein kinase OS=Mus musculus GN=Musk PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.449e-15
Identity = 71/266 (26.69%), Postives = 116/266 (43.61%), Query Frame = 3
Query:   75 TRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANG--------------------SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            T P E   D    +    ++  L    L  L+   +       +G G FG+V++ R A G L       VAVK LKEE ++  +  FQ E  +++   + N++ L G C       L++ YMA G                     +++R R      PPL    +  IA   A G++YL E    K +HRD+   N L+ E     + DFGL++ +   DY       A+   +  + PE +   R + ++DV+ YG++L E+ +
Sbjct:  537 TLPSELLLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGETMVVKIADFGLSRNIYSADYYKADGNDAI--PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 796          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: MUSK_HUMAN (Muscle, skeletal receptor tyrosine protein kinase OS=Homo sapiens GN=MUSK PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.449e-15
Identity = 71/266 (26.69%), Postives = 115/266 (43.23%), Query Frame = 3
Query:   75 TRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSL--------------------PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            T P E   D    +    ++  L    L  L+   +       +G G FG+V++ R A G L       VAVK LKEE ++  +  FQ E  +++   + N++ L G C       L++ YMA G +   LR                          PPL    +  IA   A G++YL E    K +HRD+   N L+ E     + DFGL++ +   DY   +   A+   +  + PE +   R + ++DV+ YG++L E+ +
Sbjct:  538 TLPSELLLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSMRAQVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKANENDAI--PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 797          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: SRK4_SPOLA (Tyrosine-protein kinase isoform SRK4 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.893e-15
Identity = 69/202 (34.16%), Postives = 93/202 (46.04%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            LG G FG+V++G       VAVK LK    S  E  F  E  I+    H  L+ L   CT      +V   M +GS+   LR    SL     P    +    A G+SYL +      IHRD+ A NIL+ E     V DFGLA+++D +           +   APE     R + K+DV+ +GI+L E+IT  R   P M
Sbjct:  246 LGAGQFGEVWEGLWNGTTSVAVKTLKPGTMSIEE--FLEEASIMKQLRHPKLIQLYAVCTKEEPIYIVTELMKHGSLLEYLRGDGRSLK---LPDLVDMCSQVASGMSYLEQQ---NYIHRDLAARNILVGEHKICKVADFGLARVIDEEIYEAKLGAKFPIKWTAPEAAMYSRFTIKSDVWSFGIVLYEVITYGRFPYPGM 439          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: SRC_RSVP (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain Prague C) GN=V-SRC PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.893e-15
Identity = 66/204 (32.35%), Postives = 98/204 (48.04%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEK--LLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            LG+G FG+V+ G   D   VA+K LK    S     F  E +++    H  L+ L      V+E+   +V  YM+ GS+   L+        L  P    +A   A G++Y+        +HRD++AANIL+ E     V DFGLA+L++  +          +   APE    GR + K+DV+ +GI+L EL T  R   P M
Sbjct:  273 LGQGCFGEVWMGTWNDTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYA---VVSEEPIYIVIEYMSKGSLLDFLKGEMGKY--LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 466          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PLO1_SCHPO (Serine/threonine-protein kinase plo1 OS=Schizosaccharomyces pombe GN=plo1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.893e-15
Identity = 59/212 (27.83%), Postives = 108/212 (50.94%), Query Frame = 3
Query:  186 FSNKNILGRGGFGKVYK-----GRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHITTAVHGTVGHIAPEYLSTGRS--SEKTDVFGYGIMLLELITGQRAF 797
            ++  + +G GGF + ++     G +   K++A + L+ ++T   +L+   E+K+     H N++G        T   L+     + S+   LR+R+     L  P  + + +     L Y+H+    ++IHRD+K  NI+LDE     +GDFGLA  LMD ++  +T  + GT  +IAPE L   +   S + D++  G+++  L+ G+  F
Sbjct:   41 YTRYDCIGEGGFARCFRVKDNYGNIYAAKVIAKRSLQNDKT---KLKLFGEIKVHQSMSHPNIVGFIDCFEDSTNIYLILELCEHKSLMELLRKRKQ----LTEPEVRYLMMQILGALKYMHKK---RVIHRDLKLGNIMLDESNNVKIGDFGLAALLMDDEERKMT--ICGTPNYIAPEILFNSKEGHSFEVDLWSAGVVMYALLIGKPPF 240          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PLK4_DROYA (Serine/threonine-protein kinase PLK4 OS=Drosophila yakuba GN=SAK PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.893e-15
Identity = 66/211 (31.28%), Postives = 98/211 (46.45%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            + +  +++LG+GGF  VYK R L   + VA+K + ++   G  L  + + EV+I S   H ++L L  F        LV     NG +    R       P        I      GL YLH H    I+HRD+  +N+LL +E    + DFGLA  +   D  H+T    GT  +I+PE +S        DV+  G ML  L+ G+  F+
Sbjct:   12 EDYEVQHLLGKGGFAIVYKARCLHTHQDVAIKMIDKKLIQGTGLTNRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLVLELAHNGELH---RYMNHIARPFTETEAASILKQVVAGLLYLHSH---NIMHRDISLSNLLLSKEMHVKIADFGLATQLKRPDERHMTMC--GTPNYISPEVVSRSSHGLPADVWSVGCMLYTLLVGRPPFE 214          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PLK4_DROER (Serine/threonine-protein kinase PLK4 OS=Drosophila erecta GN=SAK PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.893e-15
Identity = 66/211 (31.28%), Postives = 98/211 (46.45%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            + +  +++LG+GGF  VYK R L   + VA+K + ++   G  L  + + EV+I S   H ++L L  F        LV     NG +    R       P        I      GL YLH H    I+HRD+  +N+LL +E    + DFGLA  +   D  H+T    GT  +I+PE +S        DV+  G ML  L+ G+  F+
Sbjct:   12 EDYEVQHLLGKGGFAIVYKARCLHTHQDVAIKMIDKKLIQGTGLTNRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLVLELAHNGELH---RYMNHIARPFTETEAASILKQVVAGLLYLHSH---NIMHRDISLSNLLLSKEMHVKIADFGLATQLKRPDERHMTMC--GTPNYISPEVVSRSSHGLPADVWSVGCMLYTLLVGRPPFE 214          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: FYN_XENLA (Proto-oncogene tyrosine-protein kinase Fyn OS=Xenopus laevis GN=fyn PE=2 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.893e-15
Identity = 65/204 (31.86%), Postives = 99/204 (48.53%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEK--LLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            LG G FG+V+ G       VA+K LK    S     F  E +I+    H  L+ L      V+E+   +V  YM+ GS+   L++ +     L  P    +A   ARG++Y+        IHRD+++ANIL+       + DFGLA+L++  +          +   APE    GR + K+DV+ +GI+L EL+T  R   P M
Sbjct:  277 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES--FLEEAQIMKKLKHDKLVQLYA---VVSEEPIYIVTEYMSKGSLLDFLKDGEGRA--LKLPNLVDMAAQVARGMAYIERM---NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM 470          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: FES_MOUSE (Proto-oncogene tyrosine-protein kinase Fes/Fps OS=Mus musculus GN=Fes PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.893e-15
Identity = 64/195 (32.82%), Postives = 96/195 (49.23%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHG----TVGHIAPEYLSTGRSSEKTDVFGYGIMLLE 773
            +GRG FG+V+ GRL AD   VAVK  +E      + +F  E +I+    H N++ L G CT      +V   +  G   + LR   + L      T  ++   +A G+ YL   C    IHRD+ A N L+ E+    + DFG+++    +   I  A  G     V   APE L+ GR S ++DV+ +GI+L E
Sbjct:  567 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYNHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV---KTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGIYAASAGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 752          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PLK4_DROMO1.449e-1529.86Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
MUSK_MOUSE1.449e-1526.69Muscle, skeletal receptor tyrosine protein kinase ... [more]
MUSK_HUMAN1.449e-1526.69Muscle, skeletal receptor tyrosine protein kinase ... [more]
SRK4_SPOLA1.893e-1534.16Tyrosine-protein kinase isoform SRK4 OS=Spongilla ... [more]
SRC_RSVP1.893e-1532.35Tyrosine-protein kinase transforming protein Src O... [more]
PLO1_SCHPO1.893e-1527.83Serine/threonine-protein kinase plo1 OS=Schizosacc... [more]
PLK4_DROYA1.893e-1531.28Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PLK4_DROER1.893e-1531.28Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
FYN_XENLA1.893e-1531.86Proto-oncogene tyrosine-protein kinase Fyn OS=Xeno... [more]
FES_MOUSE1.893e-1532.82Proto-oncogene tyrosine-protein kinase Fes/Fps OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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