FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EPHB4_HUMAN (Ephrin type-B receptor 4 OS=Homo sapiens GN=EPHB4 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.472e-15
Identity = 65/212 (30.66%), Postives = 111/212 (52.36%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRL-ADGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVAS--RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--YKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V +GRL A GK    VA+K LK   T     +F +E  I+    H N++ L G  T     +++  +M NG++ S  RL + Q ++  L    R     G A G+ YL E      +HRD+ A NIL++      V DFGL++ ++    D   T+++ G   +   APE ++  + +  +D + YGI++ E+++ G+R +
Sbjct:  618 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY 821          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EPA4A_XENLA (Ephrin type-A receptor 4-A OS=Xenopus laevis GN=epha4-A PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.472e-15
Identity = 61/208 (29.33%), Postives = 103/208 (49.52%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRL-ADGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V  GRL   GK    VA+K LK   T      F +E  I+    H N++ L G  T     +++  YM NGS+ + LR+       +       I  G   G+ YL    D   +HRD+ A NIL++      V DFG+++++  D +  + T      +   APE ++  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  623 EKVIGVGEFGEVCSGRLKVPGKREIYVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ---LVGILRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 824          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EPA4A_DANRE (Ephrin type-A receptor 4a (Fragment) OS=Danio rerio GN=epha4a PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.472e-15
Identity = 65/214 (30.37%), Postives = 103/214 (48.13%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLA-DGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD------YKDTHITTAVHGTVGHI-----APEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            +G G FG+V  GRL   GK    VA+K LK   T      F +E  I+    H N++ L G  T     +++  YM NGS+ + LR+       +       I  G A G+ YL    D   +HRD+ A NIL++      V DFG++++++      Y    IT       G I     APE ++  + +  +DV+ YGI++ E+++ G+R +
Sbjct:    1 IGIGEFGEVCSGRLKMPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIRLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ---LVGILRGIASGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEEDPDAAYTTREITGTYQSQGGKIPIRWTAPEAITYRKFTSASDVWSYGIVMWEVMSYGERPY 208          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: ROS_CHICK (Proto-oncogene tyrosine-protein kinase ROS OS=Gallus gallus GN=ROS1 PE=2 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.229e-15
Identity = 71/225 (31.56%), Postives = 109/225 (48.44%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGR----LADGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEE------FEAVVGDFGLAKLMDYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            D  +   +LG G FG+VY+G     LADG     VAVK LK   T   + +F  E  ++S   H ++L L G C     + L+   M  G + S L   R+++   P L       I L   +G  YL +    + IHRD+ A N L+ E+          +GDFGLA+ + YK+ +      G   V  +APE L  G  +  +DV+ +G+++ E +T GQ+ +
Sbjct: 1959 DKLNLHKLLGSGAFGEVYEGTALDILADGSGESRVAVKTLKRGATDQEKSEFLKEAHLMSKFDHPHILKLLGVCLLNEPQYLILELMEGGDLLSYLRGARKQKFQSPLLTLTDLLDICLDICKGCVYLEK---MRFIHRDLAARNCLVSEKQYGSCSRVVKIGDFGLARDI-YKNDYYRKRGEGLINVRWMAPESLIDGVFTNHSDVWAFGVLVWETLTLGQQPY 2179          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: INSR_AEDAE (Insulin-like receptor OS=Aedes aegypti GN=InR PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.229e-15
Identity = 62/209 (29.67%), Postives = 100/209 (47.85%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSL-----PPLDWPTRKKI---ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            LG+G FG VYKG L         +  A+K + E  T+  +  F  E  ++      +++ L G  +     L++   MANG + S LR  +        P    PT ++I   A+  A G++YL      K +HRD+ A N ++ ++    +GDFG+ + + Y+  +      G   V  +APE L  G  S  +DVF YG++L E+ T
Sbjct: 1031 LGQGSFGMVYKGILTQLRGEKCNQPCAIKTVNESATAREKDSFLLEASVMKQFNTHHVVRLLGVVSQGDPTLVIMELMANGDLKSYLRRHRPDYENGEDPSPQPPTLRQIIQMAIEIADGMAYLSAK---KFVHRDLAARNCMVADDMTVKIGDFGMTRDI-YETDYYRKGTKGFLPVRWMAPESLKDGIFSSSSDVFSYGVVLWEMAT 1235          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: FPS_DROME (Tyrosine-protein kinase Fps85D OS=Drosophila melanogaster GN=Fps85D PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.229e-15
Identity = 59/197 (29.95%), Postives = 101/197 (51.27%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIAL--GSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHG-TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            +GRG FG VYK +L   KL VAVK  +       + +F  E +I+    H N++ L G C      ++V   +  GS+ + LR+  + L      TR+++ +   +A G+ YL        IHRD+ A N L+D E    + DFG+++  + ++  ++  +    V   APE L+ G+ +   DV+ YGI++ E+ +
Sbjct: 1069 IGRGNFGDVYKAKLKSTKLDVAVKTCRMTLPDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGL-----TTRQQMGMCRDAAAGMRYLE---SKNCIHRDLAARNCLVDLEHSVKISDFGMSR--EEEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFS 1255          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: FGR_MOUSE (Proto-oncogene tyrosine-protein kinase Fgr OS=Mus musculus GN=Fgr PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.229e-15
Identity = 68/204 (33.33%), Postives = 100/204 (49.02%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEK--LLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            LG G FG V+ G       VAVK LK    S     F  E +I+ +  H  L+ L      V+E+   +V  +M  GS+   L++R+     L  P    +A   A G++Y+        IHRD++AANIL+ E     + DFGLA+L++  + +        +   APE    GR + K+DV+ +GI+L ELIT  R   P M
Sbjct:  257 LGTGCFGDVWLGTWNCSTKVAVKTLKPGTMS--PKAFLEEAQIMKLLRHDKLVQLYA---VVSEEPIYIVTEFMCYGSLLDFLKDREGQ--NLMLPHLVDMAAQVAEGMAYMERM---NYIHRDLRAANILVGEYLICKIADFGLARLIEDNEYNPQQGTKFPIKWTAPEAALFGRFTVKSDVWSFGILLTELITKGRVPYPGM 450          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: FGFR1_DROME (Fibroblast growth factor receptor homolog 1 OS=Drosophila melanogaster GN=htl PE=2 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.229e-15
Identity = 67/221 (30.32%), Postives = 108/221 (48.87%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL---------RERQSSLPPLDWP----TRK---KIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAFDPAM 809
            LG G FG+V    + +  +VAVK +KE  T         E++++ +   H N++ L G C+      ++  Y  +G++   L         ++R SS PP   P    T K   K A   ARG+ YL      + IHRD+ A N+L+ +++   + DFGLA+ +   D +   T     +  +APE L       K+DV+ YGI+L E++T GQ+ +   M
Sbjct:  422 LGEGAFGRVVMAEV-NNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASR---RCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIM 638          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EPHA5_RAT (Ephrin type-A receptor 5 OS=Rattus norvegicus GN=Epha5 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.229e-15
Identity = 62/208 (29.81%), Postives = 103/208 (49.52%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLA-DGKL---VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V  GRL   GK    VA K LK   T      F +E  I+    H N++ L G  T     ++V  YM NGS+ + L++       +      +   G A G+ YL    D   +HRD+ A NIL++      V DFGL++++  D +  + T      +   APE ++  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  680 ERVIGAGEFGEVCSGRLKLPGKRELPVATKTLKVGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR---GIAAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY 881          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: EGFR_DROME (Epidermal growth factor receptor OS=Drosophila melanogaster GN=Egfr PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 3.229e-15
Identity = 68/225 (30.22%), Postives = 117/225 (52.00%), Query Frame = 3
Query:  153 SLRELQVATDGFSNKN-ILGRGGFGKVYKGR-LADGKLV----AVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPP---LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQR 791
            +L +L++  D    K  +LG G FG+VYKG  + +G+ V    A+K L +   +    +F  E  I++   H NLL L   C + ++ +L+ + M  G +   +R  +  +     L+W T+       A+G+SYL E    +++HRD+ A N+L+       + DFGLAKL+   D++   A  G   +  +A E +     + K+DV+ +G+ + EL+T GQR
Sbjct:  926 NLCKLRIVKDAELRKGGVLGMGAFGRVYKGVWVPEGENVKIPVAIKELLKSTGAESSEEFLREAYIMASEEHVNLLKLLAVCMS-SQMMLITQLMPLGCLLDYVRNNRDKIGSKALLNWSTQ------IAKGMSYLEEK---RLVHRDLAARNVLVQTPSLVKITDFGLAKLLS-SDSNEYKAAGGKMPIKWLALECIRNRVFTSKSDVWAFGVTIWELLTFGQR 1139          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EPHB4_HUMAN2.472e-1530.66Ephrin type-B receptor 4 OS=Homo sapiens GN=EPHB4 ... [more]
EPA4A_XENLA2.472e-1529.33Ephrin type-A receptor 4-A OS=Xenopus laevis GN=ep... [more]
EPA4A_DANRE2.472e-1530.37Ephrin type-A receptor 4a (Fragment) OS=Danio reri... [more]
ROS_CHICK3.229e-1531.56Proto-oncogene tyrosine-protein kinase ROS OS=Gall... [more]
INSR_AEDAE3.229e-1529.67Insulin-like receptor OS=Aedes aegypti GN=InR PE=2... [more]
FPS_DROME3.229e-1529.95Tyrosine-protein kinase Fps85D OS=Drosophila melan... [more]
FGR_MOUSE3.229e-1533.33Proto-oncogene tyrosine-protein kinase Fgr OS=Mus ... [more]
FGFR1_DROME3.229e-1530.32Fibroblast growth factor receptor homolog 1 OS=Dro... [more]
EPHA5_RAT3.229e-1529.81Ephrin type-A receptor 5 OS=Rattus norvegicus GN=E... [more]
EGFR_DROME3.229e-1530.22Epidermal growth factor receptor OS=Drosophila mel... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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