FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: STK6_MOUSE (Serine/threonine-protein kinase 6 OS=Mus musculus GN=Aurka PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 63/233 (27.04%), Postives = 103/233 (44.21%), Query Frame = 3
Query:  114 DDSELQLGQLKRFS-LRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL---KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            +DSE +   L++    ++ Q   + F     LG+G FG VY  R    K +   ++    +   +  E Q + EV+I S   H N+L L G+    T   L+  Y   G+V   L++    L   D           A  LSY H     ++IHRD+K  N+LL    E  + DFG +    +  +   T + GT+ ++ PE +      EK D++  G++  E + G   F+
Sbjct:   99 NDSEKEQASLQKTEDTKKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKANVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTMCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 321          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: SRC_RSVPA (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain PA101T) GN=V-SRC PE=3 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 66/204 (32.35%), Postives = 98/204 (48.04%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEK--LLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            LG+G FG+V+ G       VA+K LK    S     F  E +++    H  L+ L      V+E+   +V  YM+ GS+   L+        L  P   ++A   A G++Y+        +HRD++AANIL+ E     V DFGLA+L++  +          V   APE    GR + K+DV+ +GI+L EL T  R   P M
Sbjct:  270 LGQGYFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAM---VSEEPIYIVIEYMSKGSLLDFLKGEMGKY--LRLPQLVEMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARPGARFPVKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 463          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: ROS_AVISU (Tyrosine-protein kinase transforming protein ros OS=UR2 sarcoma virus GN=V-ROS PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 71/225 (31.56%), Postives = 109/225 (48.44%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGR----LADGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEE------FEAVVGDFGLAKLMDYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            D  +   +LG G FG+VY+G     LADG     VAVK LK   T   + +F  E  ++S   H ++L L G C     + L+   M  G + S L   R+++   P L       I L   +G  YL +    + IHRD+ A N L+ E+          +GDFGLA+ + YK+ +      G   V  +APE L  G  +  +DV+ +G+++ E +T GQ+ +
Sbjct:   96 DKLNLHKLLGSGAFGEVYEGTALDILADGSGESRVAVKTLKRGATDQEKSEFLKEAHLMSKFDHPHILKLLGVCLLNEPQYLILELMEGGDLLSYLRGARKQKFQSPLLTLTDLLDICLDICKGCVYLEK---MRFIHRDLAARNCLVSEKQYGSCSRVVKIGDFGLARDI-YKNDYYRKRGEGLLPVRWMAPESLIDGVFTNHSDVWAFGVLVWETLTLGQQPY 316          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: RAF1_RAT (RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus GN=Raf1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 66/200 (33.00%), Postives = 100/200 (50.00%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYL---STGRSSEKTDVFGYGIMLLELITGQ 788
            +G G FG VYKG+      VAVK LK    +  +LQ F+ EV ++    H N+L   G+ T      +V ++    S+   L  +++            IA  +A+G+ YLH      IIHRD+K+ NI L E     +GDFGLA +   +  +       G+V  +APE +        S ++DV+ YGI+L EL+TG+
Sbjct:  355 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID---IARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 545          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PLK4_DROWI (Serine/threonine-protein kinase PLK4 OS=Drosophila willistoni GN=SAK PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 64/206 (31.07%), Postives = 97/206 (47.09%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLADG-KLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            +++LG+GGF  VYK R     + VA+K + ++   G  L  + + EV+I S   H ++L L  F        LV     NG +   + ++ S   P        I      GL YLH H    I+HRD+  +N+LL ++    + DFGLA  +   D  H+T    GT   I+PE +S        DV+  G +L  L+ G+  FD
Sbjct:   17 QHLLGKGGFASVYKARCRRTYQDVAIKMIDKKLIHGTGLSSRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLVLELAHNGELHRYMNQQMSH--PFTEADAATILQQVVAGLLYLHSH---NIMHRDISLSNLLLSKDMHVKIADFGLATQLKRPDEKHMTMC--GTPNFISPEVVSRLSHGLAADVWSVGCLLYTLVVGRPPFD 215          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: PLK4_DROSE (Serine/threonine-protein kinase PLK4 OS=Drosophila sechellia GN=SAK PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 64/211 (30.33%), Postives = 99/211 (46.92%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            + +  +++LG+GGF  VYK R L   + VA+K + ++   G  L  + + EV+I S   H ++L L  F        LV     NG +   +          +  +  K  +    GL YLH H    I+HRD+  +N+LL  E    + DFGLA  +   D  H+T    GT  +I+PE +S        DV+  G ML  L+ G+  F+
Sbjct:   12 EDYEVQHLLGKGGFATVYKARCLHTHQDVAIKMIDKKLIQGTGLTSRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLVLELAHNGELHRYMNHIARHFTETEAASILKQVVA---GLLYLHSH---NIMHRDISLSNLLLSREMHVKIADFGLATQLKRPDERHMTMC--GTPNYISPEVVSRSSHGLPADVWSVGCMLYTLLVGRPPFE 214          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: M3K3_ARATH (Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 58/205 (28.29%), Postives = 106/205 (51.71%), Query Frame = 3
Query:  201 ILGRGGFGKVYKG-RLADGKLVAVKRL-------KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            ++G G FG+VY G  L  G+L+A+K++        +E+T G   + + EV+++    H N++   G         ++  ++  GS++S L +  S   P+     K++ LG    L YLH +    I+HRD+K ANIL+D +    + DFG + K+++    +   ++ GT   +APE +     S   D++  G  ++E+ TG+
Sbjct:   73 LIGCGAFGRVYMGMNLDSGELLAIKQVLIAPSSASKEKTQGHIRELEEEVQLLKNLSHPNIVRYLGTVRESDSLNILMEFVPGGSISSLLEKFGSFPEPVIIMYTKQLLLG----LEYLHNN---GIMHRDIKGANILVDNKGCIRLADFGASKKVVELATVNGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK 270          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 61/205 (29.76%), Postives = 102/205 (49.76%), Query Frame = 3
Query:  201 ILGRGGFGKVYKG-RLADGKLVAVKRL-------KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            ++GRG FG VY G  L  G+L+AVK++        +E+T     + + EVK++    H N++   G         ++  ++  GS++S L E+  + P     T     L    GL YLH H    I+HRD+K ANIL+D +    + DFG +K + +        ++ GT   +APE +     S   D++  G  ++E++TG+
Sbjct:   73 LIGRGAFGTVYMGMNLDSGELLAVKQVLITSNCASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGTVREDETLNILLEFVPGGSISSLL-EKFGAFPESVVRTYTNQLL---LGLEYLHNHA---IMHRDIKGANILVDNQGCIKLADFGASKQVAELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMVTGK 270          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: LYN_RAT (Tyrosine-protein kinase Lyn OS=Rattus norvegicus GN=Lyn PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 57/193 (29.53%), Postives = 93/193 (48.19%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            LG G FG+V+ G   +   VAVK LK    S     F  E  ++    H  L+ L    T      ++  +MA GS+   L+  + S   L  P     +   A G++Y+        IHRD++AAN+L+ E     + DFGLA++++  +          +   APE ++ G  + K+DV+ +GI+L E++T
Sbjct:  253 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSAQA--FLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGSKVLL--PKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 438          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: LCK_HUMAN (Proto-oncogene tyrosine-protein kinase LCK OS=Homo sapiens GN=LCK PE=1 SV=6)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 60/203 (29.56%), Postives = 99/203 (48.77%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKL-LVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            LG G FG+V+ G       VAVK LK+   S     F  E  ++    H+ L+ L  +     E + ++  YM NGS+   L+        ++      +A   A G++++ E      IHRD++AANIL+ +     + DFGLA+L++  +          +   APE ++ G  + K+DV+ +GI+L E++T  R   P M
Sbjct:  251 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 444          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
STK6_MOUSE4.217e-1527.04Serine/threonine-protein kinase 6 OS=Mus musculus ... [more]
SRC_RSVPA4.217e-1532.35Tyrosine-protein kinase transforming protein Src O... [more]
ROS_AVISU4.217e-1531.56Tyrosine-protein kinase transforming protein ros O... [more]
RAF1_RAT4.217e-1533.00RAF proto-oncogene serine/threonine-protein kinase... [more]
PLK4_DROWI4.217e-1531.07Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PLK4_DROSE4.217e-1530.33Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
M3K3_ARATH4.217e-1528.29Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K2_ARATH4.217e-1529.76Mitogen-activated protein kinase kinase kinase 2 O... [more]
LYN_RAT4.217e-1529.53Tyrosine-protein kinase Lyn OS=Rattus norvegicus G... [more]
LCK_HUMAN4.217e-1529.56Proto-oncogene tyrosine-protein kinase LCK OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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