FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.457e-47
Identity = 101/226 (44.69%), Postives = 142/226 (62.83%), Query Frame = 3
Query:  132 LGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            LG  + FSL ELQ AT  F    I+G GGFG VY G L DG  VAVKR    ++  G  +FQTE++++S   HR+L+ L G+C   +E +LVY +M+NG     L  +  +L PL W  R +I +GSARGL YLH      IIHRDVK+ NILLDE   A V DFGL+K + +   H++TAV G+ G++ PEY    + ++K+DV+ +G++LLE +  + A +P +
Sbjct:  508 LGLGRYFSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKR-GNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGK--NLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQL 730          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 5.457e-47
Identity = 104/247 (42.11%), Postives = 152/247 (61.54%), Query Frame = 3
Query:   93 FFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKL----------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            F  +P  +   LQ   LK FSL EL+ AT  F   +++G GGFG V+KG + +  L          +AVKRL +E   G   ++  E+  +    H NL+ L G+C     +LLVY +M  GS+ + L  R +   PL W TR ++ALG+ARGL++LH +  P++I+RD KA+NILLD  + A + DFGLA+     D +H++T V GT G+ APEYL+TG  S K+DV+ +G++LLEL++G+RA D
Sbjct:   37 FSYMPRTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHR-EWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLH-NAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAID 281          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.457e-47
Identity = 111/251 (44.22%), Postives = 158/251 (62.95%), Query Frame = 3
Query:   51 IGF--AYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL-RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHI-TTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            IGF   Y RR + +       ++ D +  L    RF L  + +ATD FS++N LG+GGFG VYKG   +G+ VAVKRL +  +  G+++F+ EV +++   H+NL+ L GFC    E++LVY ++ N S+   +  E + SL  L W  R +I  G ARGL YLHE    KIIHRD+KA+NILLD E    V DFG A+L D  +T   T  + GT G++APEYL+ G+ S K+DV+ +G+MLLE+I+G+R
Sbjct:  305 IGFIKVYARRGKLNNVGSAEYSDSDGQFML----RFDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKG-SGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSL--LTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER 548          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.127e-47
Identity = 102/230 (44.35%), Postives = 148/230 (64.35%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHI-TTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            P E+  +  L    ++ L+ ++ AT  FS  N+LG+GGFG+V+KG L DG  +AVKRL +E   G + +FQ E  +++   HRNL+G+ GFC    EK+LVY ++ N S+   L E  +    LDW  R KI +G+ARG+ YLH     KIIHRD+KA+NILLD E E  V DFG+A++     +   T  V GT G+I+PEYL  G+ S K+DV+ +G+++LE+I+G+R
Sbjct:  298 PPEESPKYSL----QYDLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQGVQ-EFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFE-PTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKR 521          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.074e-46
Identity = 97/218 (44.50%), Postives = 139/218 (63.76%), Query Frame = 3
Query:  153 SLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRE-RQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            S++ L+  T+ FS+ NILG GGFG VYKG L DG  +AVKR++    +G G  +F++E+ +++   HR+L+ L G+C    EKLLVY YM  G+++  L E  +  L PL W  R  +AL  ARG+ YLH       IHRD+K +NILL ++  A V DFGL +L       I T + GT G++APEY  TGR + K DV+ +G++L+ELITG+++ D
Sbjct:  577 SIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLD 794          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.708e-46
Identity = 97/222 (43.69%), Postives = 139/222 (62.61%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            R     ++ AT+ F     +G GGFGKVYKG L DG  VAVKR    ++  G  +F+TE++++S   HR+L+ L G+C    E +L+Y YM NG+V S L    S LP L W  R +I +G+ARGL YLH      +IHRDVK+ANILLDE F A V DFGL+K   +   TH++TAV G+ G++ PEY    + ++K+DV+ +G++L E++  +   DP +
Sbjct:  472 RIPFAAVKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKR-GNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYG--SGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVIDPTL 690          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.708e-46
Identity = 106/231 (45.89%), Postives = 147/231 (63.64%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKG----------RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            LK F+  EL+ AT  F   N+LG GGFG V+KG          R   G +VAVK+LK E   G + ++ TEV  +    H NL+ L G+C     +LLVY +M  GS+ + L  R +   PL W  R K+A+G+A+GL++LHE    ++I+RD KAANILLD +F A + DFGLAK     D TH++T V GT G+ APEY++TGR + K+DV+ +G++LLELI+G+RA D
Sbjct:   71 LKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHK-EWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQ--PLTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMD 297          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.537e-46
Identity = 97/222 (43.69%), Postives = 144/222 (64.86%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDPAM 809
            R+ L  ++ ATD F    ++G GGFGKVYKG L D   VAVKR    ++  G  +F+TEV++++   HR+L+ L G+C   +E ++VY YM  G++   L +     P L W  R +I +G+ARGL YLH      IIHRDVK+ANILLD+ F A V DFGL+K   D   TH++TAV G+ G++ PEYL+  + +EK+DV+ +G+++LE++ G+   DP++
Sbjct:  474 RYPLALIKEATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKR-GAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDK-PRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSL 693          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.619e-46
Identity = 106/234 (45.30%), Postives = 150/234 (64.10%), Query Frame = 3
Query:   96 FDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHI-TTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +D P EDD     G L+ F  + ++ ATD FS  N LG+GGFG+VYKG L +G  VAVKRL   +TSG GE +F+ EV +++   HRNL+ L GFC    EK+LVY +++N S+   L + +     LDW TR KI  G ARG+ YLH+     IIHRD+KA NILLD +    V DFG+A++ +   T   T  V GT G+++PEY   G+ S K+DV+ +G+++LE+I+G++
Sbjct:  312 YDTPEEDDITTA-GSLQ-FDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLS--KTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQ-SQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRK 540          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.619e-46
Identity = 99/212 (46.70%), Postives = 138/212 (65.09%), Query Frame = 3
Query:  165 LQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT---HITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            L+ ATD FS++N LGRGGFG VYKG    G+ +AVKRL    +  G+ +F+ E+ +++   HRNL+ L GFC    E+LLVY ++ N S+   + + +     LDW  R K+  G ARGL YLHE    +IIHRD+KA+NILLD+E    + DFGLAKL D   T     T+ + GT G++APEY   G+ S KTDVF +G++++E+ITG+R
Sbjct:  350 LKTATDNFSSENELGRGGFGSVYKGVFPQGQEIAVKRLSGN-SGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKR-QLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKR 559          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y4391_ARATH5.457e-4744.69Probable receptor-like protein kinase At4g39110 OS... [more]
NAK_ARATH5.457e-4742.11Probable serine/threonine-protein kinase NAK OS=Ar... [more]
CRK40_ARATH5.457e-4744.22Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK33_ARATH7.127e-4744.35Putative cysteine-rich receptor-like protein kinas... [more]
TMK1_ARATH2.074e-4644.50Probable receptor protein kinase TMK1 OS=Arabidops... [more]
HERK_ARATH2.708e-4643.69Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
APK2A_ARATH2.708e-4645.89Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y2393_ARATH3.537e-4643.69Probable receptor-like protein kinase At2g39360 OS... [more]
CRK5_ARATH4.619e-4645.30Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK29_ARATH4.619e-4646.70Cysteine-rich receptor-like protein kinase 29 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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