FC873127

Overview
NameFC873127
Unique NameFC873127
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.107e-45
Identity = 105/243 (43.21%), Postives = 152/243 (62.55%), Query Frame = 3
Query:   66 WRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +RR R    + ++    DS+ Q     RF L  + +AT+ FS +N LG+GGFG VYKG L  G+ +AVKRL    +  GEL+F+ EV +++   HRNL+ L GFC    E++LVY ++ N S+   + +       L W  R +I  G ARGL YLHE    +IIHRD+KA+NILLD E    V DFG+A+L +  +T   T+ V GT G++APEY+  G+ S K+DV+ +G+MLLE+I+G++
Sbjct:  303 YRRMR-RRIYTEINKNSDSDGQA--TLRFDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGG-SGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWL-LTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEK 540          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.107e-45
Identity = 101/243 (41.56%), Postives = 148/243 (60.91%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKG----------RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            P  +   LQ   LK FS  EL+ AT  F   ++LG GGFG V+KG          R   G ++AVK+L ++   G + ++  EV  +    HR+L+ L G+C     +LLVY +M  GS+ + L  R     PL W  R K+ALG+A+GL++LH   + ++I+RD K +NILLD E+ A + DFGLAK     D +H++T V GT G+ APEYL+TG  + K+DV+ +G++LLEL++G+RA D
Sbjct:   41 PRTEGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQ-EWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHS-SETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVD 281          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 6.670e-45
Identity = 100/234 (42.74%), Postives = 145/234 (61.97%), Query Frame = 3
Query:  126 LQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKG----------RLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            L+   LK ++  +L+ AT  F   ++LG+GGFGKVY+G          R+  G +VA+KRL  E   G   ++++EV  + M  HRNL+ L G+C    E LLVY +M  GS+ S L  R    P   W  R KI +G+ARGL++LH     ++I+RD KA+NILLD  ++A + DFGLAKL    + +H+TT + GT G+ APEY++TG    K+DVF +G++LLE++TG  A
Sbjct:   66 LESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFA-EWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRNDPFP---WDLRIKIVIGAARGLAFLHS-LQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTA 294          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 6.670e-45
Identity = 102/246 (41.46%), Postives = 148/246 (60.16%), Query Frame = 3
Query:   57 FAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            F Y +R R  +    +    ++E +      F    ++VATD FS  N +G GGFG VYKG L DG  +AVKRL    +  G  +F+TEV +++   H+NL+ L GF    +E+LLVY ++ N S+  R          LDW  R  I +G +RGL YLHE  +  IIHRD+K++N+LLDE+    + DFG+A+  D+ +T  +T  V GT G++APEY   GR S KTDV+ +G+++LE+ITG+R
Sbjct:  293 FIYLKRRRKKK---TLKENAENEFESTDSLHFDFETIRVATDDFSLTNKIGEGGFGVVYKGHLPDGLEIAVKRLSIH-SGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSL-DRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKR 533          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.712e-45
Identity = 97/216 (44.91%), Postives = 142/216 (65.74%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADG-KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL-RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELI 779
            +RFS+ E++ AT+ F +K I+G GGFG VYKG++  G  LVAVKRL E  ++ G  +F+TE++++S   H +L+ L G+C    E +LVY YM +G++   L R  ++S PPL W  R +I +G+ARGL YLH      IIHRD+K  NILLDE F   V DFGL+++       TH++T V GT G++ PEY      +EK+DV+ +G++LLE++
Sbjct:  504 RRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRL-EITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVL 718          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.712e-45
Identity = 93/223 (41.70%), Postives = 139/223 (62.33%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLR-ERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-----HITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            F+ RE+  AT+ FS  N++G GGFG+V+K  L DG + A+KR K   T G + Q   EV+I+    HR+L+ L G C  +   LL+Y ++ NG++   L      +  PL W  R +IA  +A GL+YLH    P I HRDVK++NILLDE+  A V DFGL++L+D  +T     HI T   GT+G++ PEY    + ++K+DV+ +G++LLE++T ++A D
Sbjct:  351 FTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGTD-QILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAID 572          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.712e-45
Identity = 93/215 (43.26%), Postives = 135/215 (62.79%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            FS REL+ AT+ FS+  ILG+GG G VYKG L DG++VAVK+ K       E +F  EV I+S   HRN++ L G C      +LVY ++ NG++   L +         W  R +IA+  A  LSYLH      I HRDVK+ NI+LDE++ A V DFG ++ +    TH+TT V GTVG++ PEY  + + ++K+DV+ +G++L+ELITG+++
Sbjct:  435 FSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLE-EFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKS 648          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.486e-44
Identity = 96/214 (44.86%), Postives = 134/214 (62.62%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            F    L+ AT  F N N LG+GGFG VYKG L DG+ +AVKRL           F  EV +IS   H+NL+ L G   +  E LLVY Y+ N S+   + +       LDW  R  I +G+A GL YLHE    KIIHRD+KA+NILLD + +A + DFGLA+      +HI+TA+ GT+G++APEYL+ G+ +E  DV+ +G+++LE++TG++
Sbjct:  313 FKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRAT-DFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRG-KTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQ 524          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.941e-44
Identity = 94/215 (43.72%), Postives = 135/215 (62.79%), Query Frame = 3
Query:  150 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLP-PLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            FS +EL+ ATD FS   +LG+GG G VYKG LA+G++VAVKR K       E +F  EV ++S   HRN++ L G C      +LVY Y+ NG +  RL E+  S    + W  R +IA+  A  LSY+H      I HRD+K  NILLDE++ A V DFG ++ +    TH+TT V GT G++ PEY  + + ++K+DV+ +G++L+ELITG++
Sbjct:  420 FSSKELKKATDNFSMNRVLGQGGQGTVYKGMLAEGRIVAVKRSKVVGEGKME-EFINEVVLLSQINHRNIVKLLGCCLGTEVPVLVYEYIPNGDLFKRLHEKSESNDYTMTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLTTLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEK 633          
BLAST of FC873127 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 2.535e-44
Identity = 99/232 (42.67%), Postives = 143/232 (61.64%), Query Frame = 3
Query:  111 EDDSELQL--GQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD---YKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +D  EL +   QL +     +++AT+ FS  N LG GGFG VYKG L  G+ +AVKRL   ++  G+ +F  EV +++   HRNL+ L GFC    E++L+Y +  N S+   + +    +  LDW TR +I  G ARGL YLHE    KI+HRD+KA+N+LLD+     + DFG+AKL D      T  T+ V GT G++APEY  +G  S KTDVF +G+++LE+I G++
Sbjct:  317 KDLEELMIKDAQLLQLDFDTIRLATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSM-KSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMI-LDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKK 546          
The following BLAST results are available for this feature:
BLAST of FC873127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK36_ARATH5.107e-4543.21Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
APK1A_ARATH5.107e-4541.56Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
CX32_ARATH6.670e-4542.74Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK27_ARATH6.670e-4541.46Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y5900_ARATH8.712e-4544.91Putative receptor-like protein kinase At5g39000 OS... [more]
WAKLQ_ARATH8.712e-4541.70Wall-associated receptor kinase-like 20 OS=Arabido... [more]
WAKLH_ARATH8.712e-4543.26Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
CRK2_ARATH1.486e-4444.86Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
WAKLF_ARATH1.941e-4443.72Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
CRK41_ARATH2.535e-4442.67Cysteine-rich receptor-like protein kinase 41 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev Citrus clementina cDNA clone KN0AAI1AA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873127 ID=FC873127; Name=FC873127; organism=Citrus clementina; type=EST; length=809bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CCTGCTATG
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