FC873151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_BURS3 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia sp. (strain 383) GN=clpP PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.188e-39 Identity = 75/124 (60.48%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LL++R++F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKR+ +PN+RVMIHQPLG A G+A+D+ I+ RE Sbjct: 42 DIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQARE 165
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_BURCM (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=clpP PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.188e-39 Identity = 75/124 (60.48%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LL++R++F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKR+ +PN+RVMIHQPLG A G+A+D+ I+ RE Sbjct: 42 DIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQARE 165
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_BURCH (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain HI2424) GN=clpP PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.188e-39 Identity = 75/124 (60.48%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LL++R++F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKR+ +PN+RVMIHQPLG A G+A+D+ I+ RE Sbjct: 42 DIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQARE 165
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_BURCA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain AU 1054) GN=clpP PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.188e-39 Identity = 75/124 (60.48%), Postives = 104/124 (83.87%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LL++R++F+ +V+D TA+ +++QLLFL++E+ KDI L+INSPGGSV+AGM IYD M+ K DVST+C+GLAASMGAFLLA+G+KGKR+ +PN+RVMIHQPLG A G+A+D+ I+ RE Sbjct: 42 DIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQARE 165
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNS9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain CC9902) GN=clpP2 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.188e-39 Identity = 77/124 (62.10%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LLR+RIIFLG+ VDD AD +++Q+LFL+AED +KDI++++NSPGGSVTAG+ IYD M+ DV TIC GLAASMGAFLL+ G+KGKR +PNAR+MIHQPLG A G+A D+ I+ +E Sbjct: 24 DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKE 147
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP1_BACLD (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=clpP1 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.188e-39 Identity = 79/120 (65.83%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795 D + LL+ RII LGS +DD A+ I+SQLLFL+AED +KDI ++INSPGGS+TAGM IYD M+ K VSTIC G+AASMGAFLLAAG KGKRY +PN+ VMIHQPLG A G+AT++ I Sbjct: 19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEI 138
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_SALPK (ATP-dependent Clp protease proteolytic subunit OS=Salmonella paratyphi A (strain AKU_12601) GN=clpP PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.469e-39 Identity = 77/124 (62.10%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAG+ IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGISIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_SALPA (ATP-dependent Clp protease proteolytic subunit OS=Salmonella paratyphi A GN=clpP PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.469e-39 Identity = 77/124 (62.10%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LL++R+IFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAG+ IYD M+ K DVSTIC+G AASMGAFLL AG+KGKR+C+PN+RVMIHQPLG G+ATD+ I RE Sbjct: 32 DIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGISIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHARE 155
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_PSEPW (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas putida (strain W619) GN=clpP PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.469e-39 Identity = 77/124 (62.10%), Postives = 99/124 (79.84%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LL++R+IFL V+D A+ +++Q+LFL+AE+ KDI L+INSPGGSVTAGM IYD M+ K DVSTIC+G A SMGAFLLAAG+KGKR+C+PN+RVMIHQPLG G+ATD+ I +E Sbjct: 35 DIYSRLLKERVIFLVGPVEDYMANLVVAQMLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMIHQPLGGFQGQATDIEIHAQE 158
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_PROMH (ATP-dependent Clp protease proteolytic subunit OS=Proteus mirabilis (strain HI4320) GN=clpP PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.469e-39 Identity = 78/124 (62.90%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807 D + LL++RIIFL QV+D A+ I++Q+LFL+AE+ +KDI L+INSPGG +TAGM IYD M+ KADVSTIC+G A SMGAFLL+AG+KGKR C+PN+RVMIHQPLG G+ATD+ I +E Sbjct: 32 DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDINLYINSPGGVITAGMSIYDTMQYIKADVSTICMGQACSMGAFLLSAGAKGKRICLPNSRVMIHQPLGGYQGQATDIQIHAQE 155 The following BLAST results are available for this feature:
BLAST of FC873151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873151 ID=FC873151; Name=FC873151; organism=Citrus clementina; type=EST; length=809bpback to top |