FC873151

Overview
NameFC873151
Unique NameFC873151
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1189 contig Ccv1_Contig1189:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_STAAN (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain N315) GN=clpP PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_STAAM (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=clpP PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_STAAE (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain Newman) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_STAAC (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain COL) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_STAAB (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_STAA9 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain JH9) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_STAA8 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain NCTC 8325) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_STAA3 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain USA300) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_STAA2 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain JH1) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_STAA1 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII LGSQ+DD  A+ I+SQLLFL A+DS+KDI L+INSPGGSVTAG  IYD ++  K DV TIC+G+AASMG+FLLAAG+KGKR+ +PNA VMIHQPLG A G+AT++ I
Sbjct:   19 DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEI 138
The following BLAST results are available for this feature:
BLAST of FC873151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_STAAN7.143e-3965.83ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAM7.143e-3965.83ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAE7.143e-3965.83ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAC7.143e-3965.83ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAAB7.143e-3965.83ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAA97.143e-3965.83ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAA87.143e-3965.83ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAA37.143e-3965.83ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAA27.143e-3965.83ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_STAA17.143e-3965.83ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DA03FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873151 ID=FC873151; Name=FC873151; organism=Citrus clementina; type=EST; length=809bp
CTCTAGACTCTAGTTGTATTAAACGACATCGCCTTAAGTGTTGTCGTCGT
AGCAGTAGTACGACATCGTATAACGACAAAGCGAAAGAAAGAACACGATA
TTTTCGACCCTGTTTCTCGTTCTGACATTAAACTTTCTCGAACTGAACCC
ACCCAGCAAACAAATCCAAATAAGAAGATGGAGATGAGTTTGACAGCATC
TTCATTTTCGAAGCCACTCTTCTTCTCAAACCAATCCCTATCGAAAACCC
ACTTTCTCACTGCCGCTAATAACACTAACACTAGCACTACAATCAAAACG
AGGAGACCCACTTGCATAAAGGCCGCGAATAGTTCACCTTCAATAGCACA
GACTTTGTCTACCAACTGGGATGTCTCCAATTTTGCTGTTAATAATAATA
CTTCATCTCCATATCTGCCCAAATTTGAGGAGCTTGACACCACTAACATG
CTTCTCCGTCAGAGAATTATCTTCTTGGGATCCCAGGTTGATGACTTGAC
TGCTGATTTCATCATAAGTCAGCTCTTATTTCTTGACGCCGAAGATTCTA
AAAAAGATATCAGGTTGTTTATTAATTCACCTGGTGGCTCTGTTACTGCT
GGAATGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGTTTCAAC
TATTTGCTTGGGGCTTGCTGCATCTATGGGTGCATTCCTGCTAGCAGCTG
GTTCAAAAGGGAAGAGATATTGCATGCCTAATGCAAGAGTAATGATCCAT
CAACCTCTTGGGACTGCTGGAGGCAAAGCAACAGATATGAGCATACGGAT
TAGAGAGAT
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