FC873151

Overview
NameFC873151
Unique NameFC873151
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length809
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1189 contig Ccv1_Contig1189:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_PSEMY (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas mendocina (strain ymp) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 78/124 (62.90%), Postives = 98/124 (79.03%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807
            D  + LL++R+IFL  QV+D  A+ I +QLLFL+AE+  KDI L+INSPGGSVTAGM IYD M+  KADVST C+G A SMGAFLLA G+KGKR+C+PN+RVMIHQPLG   G+A+D+ I  +E
Sbjct:   35 DIYSRLLKERVIFLVGQVEDYMANLICAQLLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKE 158
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_COLP3 (ATP-dependent Clp protease proteolytic subunit OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 78/124 (62.90%), Postives = 97/124 (78.23%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807
            D  + LL++R+IFL  QV+D  A+ II+QLLFL++E   KDI L+INSPGGSVTAGM IYD MK  K ++ST+C+G AASMGAFLL+ G KGKRYC+PNARVMIHQPLG   G+A+D  I  +E
Sbjct:   43 DIYSRLLKERVIFLCGQVEDHMANLIIAQLLFLESESPDKDIYLYINSPGGSVTAGMAIYDTMKFIKPNISTVCIGQAASMGAFLLSGGEKGKRYCLPNARVMIHQPLGGFQGQASDFEIHAKE 166
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_CLOTH (ATP-dependent Clp protease proteolytic subunit OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 75/124 (60.48%), Postives = 99/124 (79.84%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIRE 807
            D  + LL+ RII L  +++D+TA  +++Q+LFL+AED  KDI+L+INSPGGSVTAG  IYD M+  K DVSTIC+G+AASMGAFLLAAG+KGKR+ +PN+ +MIHQPLG A G+ATD+ I   +
Sbjct:   19 DIYSRLLKDRIIVLSDEINDVTASLVVAQMLFLEAEDPDKDIQLYINSPGGSVTAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGARGQATDIKIHAEQ 142
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBL (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 78/120 (65.00%), Postives = 96/120 (80.00%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII L  +V+D TA  I++QLLFL+AED  KDI L+INSPGGS+T+GM IYD M+  K DVSTIC+G+AASMGAFLLAAG+KGKRY +PN+ VMIHQPLG   G+ATD+ I
Sbjct:   19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBK (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Okra / Type B1) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 78/120 (65.00%), Postives = 96/120 (80.00%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII L  +V+D TA  I++QLLFL+AED  KDI L+INSPGGS+T+GM IYD M+  K DVSTIC+G+AASMGAFLLAAG+KGKRY +PN+ VMIHQPLG   G+ATD+ I
Sbjct:   19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBJ (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Kyoto / Type A2) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 78/120 (65.00%), Postives = 96/120 (80.00%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII L  +V+D TA  I++QLLFL+AED  KDI L+INSPGGS+T+GM IYD M+  K DVSTIC+G+AASMGAFLLAAG+KGKRY +PN+ VMIHQPLG   G+ATD+ I
Sbjct:   19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBH (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 78/120 (65.00%), Postives = 96/120 (80.00%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII L  +V+D TA  I++QLLFL+AED  KDI L+INSPGGS+T+GM IYD M+  K DVSTIC+G+AASMGAFLLAAG+KGKRY +PN+ VMIHQPLG   G+ATD+ I
Sbjct:   19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP_CLOB1 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=clpP PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 78/120 (65.00%), Postives = 96/120 (80.00%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII L  +V+D TA  I++QLLFL+AED  KDI L+INSPGGS+T+GM IYD M+  K DVSTIC+G+AASMGAFLLAAG+KGKRY +PN+ VMIHQPLG   G+ATD+ I
Sbjct:   19 DIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP2_BACHK (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus thuringiensis subsp. konkukian GN=clpP2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 77/120 (64.17%), Postives = 97/120 (80.83%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII LGS +DD  A+ I+SQLLFL+++D +KDI ++INSPGGS+TAGM IYD M+  K  VSTIC+G+AASMGAFLLAAG KGKRY +PN+ VMIHQPLG A G+AT++ I
Sbjct:   19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEI 138
[Close]
BLAST of FC873151 vs. ExPASy Swiss-Prot
Match: CLPP2_BACCZ (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus cereus (strain ZK / E33L) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.143e-39
Identity = 77/120 (64.17%), Postives = 97/120 (80.83%), Query Frame = 1 
Query:  436 DTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSI 795
            D  + LL+ RII LGS +DD  A+ I+SQLLFL+++D +KDI ++INSPGGS+TAGM IYD M+  K  VSTIC+G+AASMGAFLLAAG KGKRY +PN+ VMIHQPLG A G+AT++ I
Sbjct:   19 DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEI 138
The following BLAST results are available for this feature:
BLAST of FC873151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPP_PSEMY7.143e-3962.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_COLP37.143e-3962.90ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOTH7.143e-3960.48ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOBL7.143e-3965.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOBK7.143e-3965.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOBJ7.143e-3965.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOBH7.143e-3965.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOB17.143e-3965.00ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP2_BACHK7.143e-3964.17ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_BACCZ7.143e-3964.17ATP-dependent Clp protease proteolytic subunit 2 O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DA03FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873151 ID=FC873151; Name=FC873151; organism=Citrus clementina; type=EST; length=809bp
CTCTAGACTCTAGTTGTATTAAACGACATCGCCTTAAGTGTTGTCGTCGT
AGCAGTAGTACGACATCGTATAACGACAAAGCGAAAGAAAGAACACGATA
TTTTCGACCCTGTTTCTCGTTCTGACATTAAACTTTCTCGAACTGAACCC
ACCCAGCAAACAAATCCAAATAAGAAGATGGAGATGAGTTTGACAGCATC
TTCATTTTCGAAGCCACTCTTCTTCTCAAACCAATCCCTATCGAAAACCC
ACTTTCTCACTGCCGCTAATAACACTAACACTAGCACTACAATCAAAACG
AGGAGACCCACTTGCATAAAGGCCGCGAATAGTTCACCTTCAATAGCACA
GACTTTGTCTACCAACTGGGATGTCTCCAATTTTGCTGTTAATAATAATA
CTTCATCTCCATATCTGCCCAAATTTGAGGAGCTTGACACCACTAACATG
CTTCTCCGTCAGAGAATTATCTTCTTGGGATCCCAGGTTGATGACTTGAC
TGCTGATTTCATCATAAGTCAGCTCTTATTTCTTGACGCCGAAGATTCTA
AAAAAGATATCAGGTTGTTTATTAATTCACCTGGTGGCTCTGTTACTGCT
GGAATGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGTTTCAAC
TATTTGCTTGGGGCTTGCTGCATCTATGGGTGCATTCCTGCTAGCAGCTG
GTTCAAAAGGGAAGAGATATTGCATGCCTAATGCAAGAGTAATGATCCAT
CAACCTCTTGGGACTGCTGGAGGCAAAGCAACAGATATGAGCATACGGAT
TAGAGAGAT
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