FC873153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA14_ORYSJ (Auxin-responsive protein IAA14 OS=Oryza sativa subsp. japonica GN=IAA14 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.938e-23 Identity = 58/146 (39.73%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 259 TPATKAQVVGWPPVRAYRKNAM-------------------------KGSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSEA 621 +PA+K QVVGWPPV +YR++ KG +VKV+++GAPYLRKVDL +Y Y+EL AL+ +F + + + + YEDKDGD ML GDVPW MF+ SCK++R+ + SEA Sbjct: 58 SPASKVQVVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGAPYLRKVDLRMYGGYRELRDALDALFGCFSADA---------SASAAHFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRIMRGSEA 194
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana GN=IAA13 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.305e-23 Identity = 72/207 (34.78%), Postives = 102/207 (49.28%), Query Frame = 1 Query: 157 GTKRGFLETVDLNLMGSSNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAM----------------------------------KGSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVN-------ERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSEAIGLAPRTPAKN 654 G + L D +GS K ++ + A ++ P + +QVVGWPP+ ++R N++ K F+KV ++G RKVDL + SY+ L LEDMF F T V +++D + E+V TYEDK+GDWMLVGDVPW+MF+ S KR+R+ K+SEA GLA R N Sbjct: 40 GERGRLLTAKDFPSVGS----KRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMF-FRTNPGTVGLTSQFTKPLRLLDGSS--EFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPN 239
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA12_ARATH (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.256e-22 Identity = 67/182 (36.81%), Postives = 94/182 (51.65%), Query Frame = 1 Query: 259 TPATKAQVVGWPPVRAYRKN------AMKGS------------------------------CKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLT---IRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSEAIGLAPRTPAKNSSKS*RMNNRI 687 +P +QVVGWPP+ +R N AMK + FVKV ++G RKVD+ + SY+ L LE+MF +T R V +++D + ++V TYEDK+GDWMLVGDVPW+MF+ S KR+R+ +SEA GLAPR + K + NN + Sbjct: 63 SPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSS--DFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPR---RQEQKDRQRNNPV 239
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.798e-22 Identity = 67/175 (38.29%), Postives = 91/175 (52.00%), Query Frame = 1 Query: 250 STTTPATKAQ--------VVGWPPVRAYRKNAMKGSCK---------------------------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTI----RNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSEAIGLAPR 639 +TT+P T A VVGWPP+R +R N++ K +VKV ++G RKVDL + SY+ L ALE MF+ +I ++ N K++DN EY TYED+DGDWMLVGDVPW+MFV S KR+R+ ++S+A GL R Sbjct: 94 ATTSPGTVASGHPHSSFGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDN--SAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.798e-22 Identity = 67/175 (38.29%), Postives = 91/175 (52.00%), Query Frame = 1 Query: 250 STTTPATKAQ--------VVGWPPVRAYRKNAMKGSCK---------------------------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTI----RNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSEAIGLAPR 639 +TT+P T A VVGWPP+R +R N++ K +VKV ++G RKVDL + SY+ L ALE MF+ +I ++ N K++DN EY TYED+DGDWMLVGDVPW+MFV S KR+R+ ++S+A GL R Sbjct: 94 ATTSPGTVASGHPHSSFGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDN--SAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 266
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA26_ORYSJ (Auxin-responsive protein IAA26 OS=Oryza sativa subsp. japonica GN=IAA26 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.773e-22 Identity = 57/123 (46.34%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 265 ATKAQVVGWPPVRAYRKNAMKGSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSEAIGLA 633 A + + G PP ++M + FVKV+++G PYLRKVD+ Y Y EL+ AL DMF TI ++D E+ YED DGDWMLVGDVPW+MFV SCKR+R+ ++ EA GL+ Sbjct: 26 ARRGRKNGHPPP----SSSMIQAAYFVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIG-------LMDGYGEWEHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLS 137
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.063e-21 Identity = 64/161 (39.75%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 265 ATKAQVVGWPPVRAYRKNAMKGSCK-----------------------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNER--------KII-DNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSEAIGLA 633 AT QVVGWPP+R YR N+M K FVKV ++G P RK+DL + Y+ L + LE+MF + + E KI+ D +G+ V TYEDK+GDWMLVGDVPW MF+ S +R+R+ K+SEA G A Sbjct: 84 ATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGL--VLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA18_ORYSJ (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica GN=IAA18 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.420e-20 Identity = 76/218 (34.86%), Postives = 103/218 (47.25%), Query Frame = 1 Query: 157 GTKRGFLETVDLNLMG---SSNDNKHC-------EEN---------------DAMASTTTPATKAQ---VVGWPPVRAYRKNAMKGS--------------------CK---FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMF-SFLTIRNHVN---------ERKIIDNV---NGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSE 618 G KRGF V L G S D + C +EN A A ++ P + VVGWPP+R++R+N GS CK VK+ ++G P RKVDL+IY SYQ+L SA+E++F FL + ++ E KI + GV Y YED DGD ML GD+PWK+FV + KR+R+ + SE Sbjct: 99 GAKRGFFAIVGATLEGYNQSHRDTEECGKELTLGDENMAGERKKGCCPSPPCSAAAHSSNPQGRGAIPPVVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGV-YTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA9_ORYSJ (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica GN=IAA9 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.939e-19 Identity = 61/149 (40.94%), Postives = 79/149 (53.02%), Query Frame = 1 Query: 163 KRGFLETVDLNLMGSSNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMKGSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVP--TYEDKDGDWMLVGDVPWKMFVESCKRVRL 603 KRGF E L+ +D C +D K VVGWPPV + R+ G +VKV EG RKVDL ++ SY EL + L MF +H E+K+ ++ +G P TYED DGDWMLVGDVPW F S KR+++ Sbjct: 42 KRGFREAFQETLL-LFDDGSCCNTSD----DDCRRRKKTVVGWPPVSSARRAC--GGANYVKVKKEGDAIGRKVDLALHSSYDELAATLARMFP---TNDHQGEKKMANDDHGDAAGPVVTYEDGDGDWMLVGDVPWDDFARSVKRLKI 180
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA28_ARATH (Auxin-responsive protein IAA28 OS=Arabidopsis thaliana GN=IAA28 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.100e-18 Identity = 56/139 (40.29%), Postives = 81/139 (58.27%), Query Frame = 1 Query: 274 AQVVGWPPVRAYRKNA---MKGSCK----------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSEAIGLAPRTPAK 651 A VVGWPPVR+ R+N +K K +VK+ +EG P RKV+L Y++YQ+L A++ +FS +K ++N +Y YED +GD +LVGDVPW+MFV + KR+ + K+S A L+PR K Sbjct: 47 APVVGWPPVRSSRRNLTAQLKEEMKKKESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFS----------KKDSWDLNR-QYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLSPRKHGK 174 The following BLAST results are available for this feature:
BLAST of FC873153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873153 ID=FC873153; Name=FC873153; organism=Citrus clementina; type=EST; length=821bpback to top |