FC873153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.100e-18 Identity = 58/149 (38.93%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 280 VVGWPPVRAYRKNAMKGSCK-----------------------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMF-SFLTIRNHVN-----ERKIIDNVNGV-EYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSE 618 VVGWPPVR++RKN S FVK+ ++G P RKVDL Y+SY++L ++ +F L + ++ E+ II ++G E+ TYED +GD MLVGDVPW+MFV S KR+R+ KSSE Sbjct: 104 VVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA6_ORYSJ (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica GN=IAA6 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18 Identity = 72/228 (31.58%), Postives = 101/228 (44.30%), Query Frame = 1 Query: 148 TKAGTKRGFLETVDLNLMGSSNDNKHC----------EENDAMASTT-------------TPATKAQ-------------VVGWPPVRAYRKNAMKGS--------------------CK---FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMF-SFLTIRNHVNERKIIDN----------VNGV-EYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSE 618 T G KRGF++TV+ G ++ + EE A S PAT A+ VVGWPP+R++R+N S CK VK+ ++G P RK+DL Y+SY L SA++ +F FL + +I ++G EY YED +GD MLVGDVPWK+FV + KR+R+ +SSE Sbjct: 96 TTTGAKRGFIDTVEDKTEGYNDQKQQARAGCGKELAVEEMIAAVSERKKGCCPPPPPPHGAPATPARNRPQTQGRGAAAPVVGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSE 323
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA31_ARATH (Auxin-responsive protein IAA31 OS=Arabidopsis thaliana GN=IAA31 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 9.314e-18 Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 250 STTTPATKAQVVG---WPPVRAYRKNAMKG---------SCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTK 609 S T P+T Q WPP+++ ++ +KG + FVKV +EG P RK+DL ++ Y+ LL L MF I + +RK +V TYEDKDGDWM+VGD+PW MF+E+ +R+++T+ Sbjct: 32 SLTFPSTSPQREARQDWPPIKSRLRDTLKGRRLLRRGDDTSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGN-RDRK--------HHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITR 154
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA18_ARATH (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana GN=IAA18 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.216e-17 Identity = 62/170 (36.47%), Postives = 83/170 (48.82%), Query Frame = 1 Query: 247 ASTTTPATK----AQVVGWPPVRAYRKNAMKGSCK----------------------------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNH-----VNERKIIDNV---NGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSE 618 +ST T + K VVGWPPVR++RKN GS FVK+ + G P RKVDL ++SY++L ++ +F L + + K I + NG EY TYED +GD MLVGDVPW+MFV S KR+R+ K+SE Sbjct: 82 SSTKTTSHKRTAPGPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNG-EYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA7_ORYSJ (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica GN=IAA7 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.075e-17 Identity = 59/190 (31.05%), Postives = 90/190 (47.37%), Query Frame = 1 Query: 151 KAGTKRGFLETVDLNLMGSSNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMKGS--------------------CKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTI--------------RNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSE 618 KA +G E + + ++ +N N+ T +P+T VVGWPPVR +R+N S F+K+ ++G P RK+DL + SY++L A++ +F L + V ++D EY YED +GD +LVGDVPW MFV S KR+R+ K+S+ Sbjct: 98 KANKNKGSPEEEEAHPPPATGNNALASNNNGCFQTRSPSTP--VVGWPPVRTFRRNLATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTG--EYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSD 283
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA2_ORYSJ (Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica GN=IAA2 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.075e-17 Identity = 54/153 (35.29%), Postives = 74/153 (48.37%), Query Frame = 1 Query: 265 ATKAQVVGWPPVRAYRKNAMKGSCK-----------------------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRN------HVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSE 618 A A VVGWPPVR++R+N S FVK+ ++G P RKVDL Y Y +L +A++ +F L + + V G EY YED +GD MLVGDVPW+MF+ + KR+R+ KSS+ Sbjct: 66 AAAAPVVGWPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMVGGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA25_ORYSJ (Auxin-responsive protein IAA25 OS=Oryza sativa subsp. japonica GN=IAA25 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.075e-17 Identity = 63/182 (34.62%), Postives = 86/182 (47.25%), Query Frame = 1 Query: 214 DNKHCEEND-AMASTTTPATKAQVVGWPPVRAYRKNAM--------------------------------KGSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMF-SFLT--IRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSEAIGLAPRTPAK 651 + H N+ A+ A+ AQ+VGWPPVRA+RKN S FVKV +EG RK+DL+ + SY L AL+ MF FL+ I NE + ++ + YV YED +GD MLVGDVPW++F+ S KR+ + + PR AK Sbjct: 70 EQAHQRPNECAVQRENRAASSAQLVGWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYVLVYEDNEGDRMLVGDVPWELFIASVKRLYIAQD-------PRVHAK 244
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA20_ORYSJ (Auxin-responsive protein IAA20 OS=Oryza sativa subsp. japonica GN=IAA20 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.037e-17 Identity = 55/149 (36.91%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 163 KRGFLETVDLNLMGSSNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMKGSCK--FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRL 603 KRGF E + ND+ + D + + ++VGWPPV+ + G C +VKV +EG RK+DL I SY ELL L MF N+ D Y TYED +GDWM VGDVPW+ F +S KR+++ Sbjct: 40 KRGFEEALGGFKTDDDNDDGNGRGGDGDSDGEMGNKRRKLVGWPPVKCLHRRR-DGGCGGGYVKVKMEGLAIGRKLDLSILGSYAELLDTLHLMFP------STNQEDGHDRRRRHPYAVTYEDGEGDWMQVGDVPWEAFAKSVKRLKI 181
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA10_ARATH (Auxin-responsive protein IAA10 OS=Arabidopsis thaliana GN=IAA10 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.294e-16 Identity = 64/207 (30.92%), Postives = 89/207 (43.00%), Query Frame = 1 Query: 166 RGFLETVDLNLMGSSNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMKGSCK---------------------------------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMF-------------SFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSEAIGL 630 R L + +L S + + + A AS AT+ VGWPP+R YR N++ K VKV ++G RKVDL SY L L+ MF + TI+ K++D + EY+ TY+DKDGDWMLVGDVPW+MF+ S R+R+ K+S G+ Sbjct: 59 RSSLSSSSSSLTRESGTKRSADSSPAAASN---ATRQVAVGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCTS-KLLDGSS--EYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGV 259
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA16_ORYSJ (Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.313e-15 Identity = 53/157 (33.76%), Postives = 76/157 (48.41%), Query Frame = 1 Query: 274 AQVVGWPPVRAYRKNAMKGS---------------------CKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNH-----------------VNERK----IIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSE 618 A VVGWPPVR++R+N S +FVKV ++G P RKVDL + Y EL +A++ +F L E + ++D +G EY YED +GD MLVGDVPW MF+ + +R+R+ +SS+ Sbjct: 56 APVVGWPPVRSFRRNLASSSSSSKPPRGGRDAAAAATGGKVARFVKVNMDGVPIGRKVDLAAHGGYGELSAAVDRLFRGLLAAQRDPTMATAAAAAAAGESCTGEEEAIAGLLDGGSG-EYTLVYEDDEGDQMLVGDVPWNMFIAAARRLRVLRSSD 211 The following BLAST results are available for this feature:
BLAST of FC873153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873153 ID=FC873153; Name=FC873153; organism=Citrus clementina; type=EST; length=821bpback to top |