FC873153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA8_ORYSJ (Auxin-responsive protein IAA8 OS=Oryza sativa subsp. japonica GN=IAA8 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.639e-15 Identity = 53/165 (32.12%), Postives = 83/165 (50.30%), Query Frame = 1 Query: 139 CHRTKAGTKRGFLETVDLNLMGSSNDNKHCEENDAM---ASTTTPATKAQVVGWPPVRAYRKNAMKGSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNV--NGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSSE 618 C KR L + DL L + + H + N+ +S TT A G R++ FVKV +EG P RK+DL Y+ L++ L MF +H + + + + N V +V TYED++GDWM+ GDVPW++F+ S KR+R+ ++ + Sbjct: 41 CRPPATAAKRRSLISTDLRLGLTLSSVVHIDGNNPSTPRSSLTTATVTADRGGGGGGHGRRRSL------FVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHRQFAVVGMKTNKVHHVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARADD 199
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA4_ORYSJ (Auxin-responsive protein IAA4 OS=Oryza sativa subsp. japonica GN=IAA4 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.639e-15 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 256 TTPATKAQVVGWPPVRAYRKNAMKGSCK------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVE--YVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTK 609 +TP WPP++ + ++A++ + FVKV +EG P RK+DL + Y LL L MF T + + + V G + +V TYED+DGDWM+VGDVPW++F+ S K++R+ + Sbjct: 70 STPRNSQVHADWPPIKPFLRSALQKASAAGGGGARRRRTLFVKVYMEGVPIGRKLDLLLLDGYDSLLIKLCHMFK--TPITYADVMECHQQVPGQKAAHVLTYEDQDGDWMMVGDVPWELFLSSVKKLRIAR 199
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA4_ORYSI (Auxin-responsive protein IAA4 OS=Oryza sativa subsp. indica GN=IAA4 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.639e-15 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 256 TTPATKAQVVGWPPVRAYRKNAMKGSCK------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVE--YVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTK 609 +TP WPP++ + ++A++ + FVKV +EG P RK+DL + Y LL L MF T + + + V G + +V TYED+DGDWM+VGDVPW++F+ S K++R+ + Sbjct: 70 STPRNSQVHADWPPIKPFLRSALQKASAAGGGGARRRRTLFVKVYMEGVPIGRKLDLLLLDGYDSLLIKLCHMFK--TPITYADVMECHQQVPGQKAAHVLTYEDQDGDWMMVGDVPWELFLSSVKKLRIAR 199
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA22_ORYSJ (Auxin-responsive protein IAA22 OS=Oryza sativa subsp. japonica GN=IAA22 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.066e-13 Identity = 53/136 (38.97%), Postives = 67/136 (49.26%), Query Frame = 1 Query: 265 ATKAQVVGWPPVRAYRKNA--------------MK------------------GSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMF-SFLT--IRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPW 567 A+ AQ+VGWPPVR +RKN MK S FVKV +EG RK+DL+ + SY L AL+ MF FL+ I NE + ++ + YV YED +GD MLVGDVPW Sbjct: 36 ASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKKRYVLVYEDNEGDRMLVGDVPW 171
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA20_ARATH (Auxin-responsive protein IAA20 OS=Arabidopsis thaliana GN=IAA20 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 9.021e-13 Identity = 35/92 (38.04%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 340 FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKSS 615 +VKV +EG P RK+DL + Y++L+ L+ MF+ + D N +V TY DK+GDWM+VGDVPW+MF+ + +R+++++++ Sbjct: 86 YVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEE-----DMCNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISRAN 172
BLAST of FC873153 vs. ExPASy Swiss-Prot
Match: IAA30_ARATH (Auxin-responsive protein IAA30 OS=Arabidopsis thaliana GN=IAA30 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.010e-12 Identity = 35/91 (38.46%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 340 FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLTKS 612 +VKV +EG P RK+DL + Y +L++ L+ MF+ + D + +V TY DK+GDWM+VGDVPW+MF+ S +R++++++ Sbjct: 84 YVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEE-----DMCSEKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISRA 169 The following BLAST results are available for this feature:
BLAST of FC873153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873153 ID=FC873153; Name=FC873153; organism=Citrus clementina; type=EST; length=821bpback to top |