FC873156

Overview
NameFC873156
Unique NameFC873156
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14255 contig Ccv1_Contig14255:401..1146. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873156 vs. ExPASy Swiss-Prot
Match: DMPM_STRAD (O-demethylpuromycin-O-methyltransferase OS=Streptomyces alboniger GN=dmpM PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.697e-16
Identity = 57/220 (25.91%), Postives = 101/220 (45.91%), Query Frame = 2
Query:   23 VMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIV-ESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVG-------GDMYQKIPEG-DAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 655
            V    W      I  GE ++++  G DF+ YL      +  F + M   T  +   +  E    F +   +VD+            S +P ++G+ FD P   +DA++      VG       GD + ++P G D  ++K +LH++ D     ILR    A+P   ++LV+   LP+  DS+ A    ++ D   L+ +  GRER++++  +L  + GF+
Sbjct:  138 VFRQAWSHFDHSIRTGEPAFDQVFGTDFFSYLSERPELSGTFTSSMREATRTMSTALAKEEEYDFSSYGTVVDIGGADGSLLAAVLSAHPGVEGVVFDSPEGARDAAATLDAAGVGERGRVETGDFFTRVPGGGDLYVLKSILHDWSDARSADILRTVRAAMPAHARLLVVEVLLPDTVDSS-AHPLGYLSDLYMLVNM-GGRERSERDLRSLLSDTGFR 355          
BLAST of FC873156 vs. ExPASy Swiss-Prot
Match: OMT9_DICDI (O-methyltransferase 9 OS=Dictyostelium discoideum GN=omt9 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.285e-15
Identity = 57/212 (26.89%), Postives = 106/212 (50.00%), Query Frame = 2
Query:   47 LKDQILEGELSYNKALGMD-FYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG--FQNITRLVDVXXXXXXXXXXXXSKYPHIK-GINFDVPHVIKDAS-----SYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 655
            L +    G  +  K++G++ F++      ++ ++FN  M   T   I+ I +S KG  F     +VD+              YP IK GINFD+  VI  +      S+P + H+ G+ ++ +PE D  +MK++LH++  ++C+KIL+   K++  + K+ +    +   P    +  +++I   I + Q+ + +ERT  E+  L   A FK
Sbjct:  133 LPETFANGHSNATKSVGVNHFWELFDLHPQYKDLFNQTMKVYTEAAISNITQS-KGIDFSQYDTVVDIGGNHGLLIGNLLEIYPTIKHGINFDLDVVINSSDQTLRYSHPRLTHIPGNFFESVPESDCYIMKFILHDWPTQDCVKILKTISKSMKPNAKIHLFEIIID--PRKGYSKYETYI--DILMFQMVNAKERTLDEWKELFELADFK 339          
BLAST of FC873156 vs. ExPASy Swiss-Prot
Match: HIOM_CHICK (Hydroxyindole O-methyltransferase OS=Gallus gallus GN=ASMT PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.311e-12
Identity = 57/217 (26.27%), Postives = 93/217 (42.86%), Query Frame = 2
Query:   38 WFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSF--VINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASS--YPGME-----HVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGI 661
            W  L D + EG   Y +A G+   D  G   R  E     + GQ S   +  + V +       T++ D+              YP+     +D+P V++ A     P  E     H G      IPE D  ++  +LH++DD+ C ++L   YKA    G VL++ S L E       ++    L ++ ++    G+ERT  E++ L   AGF+ +
Sbjct:  118 WHYLTDAVREGRNQYERAFGISSKDLFGARYRSEEEMLKFLAGQNSIWSICGRDVLTAFDLSPFTQIYDLGGGGGALAQECVFLYPNCTVTIYDLPKVVQVAKERLVPPEERRIAFHEGDFFKDSIPEADLYILSKILHDWDDKKCRQLLAEVYKACRPGGGVLLVESLLSEDRSGPVETQ----LYSLNMLVQTEGKERTAVEYSELLGAAGFREV 330          
The following BLAST results are available for this feature:
BLAST of FC873156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
DMPM_STRAD9.697e-1625.91O-demethylpuromycin-O-methyltransferase OS=Strepto... [more]
OMT9_DICDI6.285e-1526.89O-methyltransferase 9 OS=Dictyostelium discoideum ... [more]
HIOM_CHICK1.311e-1226.27Hydroxyindole O-methyltransferase OS=Gallus gallus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DA12FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DA12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873156 ID=FC873156; Name=FC873156; organism=Citrus clementina; type=EST; length=746bp
TATGAACTTGTCTCTTGACAAAGTAATGATGCCTGGCTGGTTCCAATTGA
AAGACCAAATTCTTGAAGGAGAACTTTCGTATAATAAAGCCCTCGGAATG
GATTTCTACGATTATCTGGGCACCGACTCCAGGTTCAATGAAGTTTTCAA
CAATGGAATGATCGGCCAGACTTCTTTTGTAATCAATAAGATTGTAGAAT
CCTACAAAGGCTTTCAGAATATTACGCGCCTTGTTGACGTTGGCGGTGGT
TTAGGAATCACCCTTGCGACCATAATTTCCAAATACCCTCATATTAAGGG
TATTAATTTTGACGTACCTCATGTTATAAAAGATGCCTCATCTTATCCCG
GCATGGAACATGTTGGCGGAGATATGTACCAAAAAATTCCAGAGGGGGAT
GCCATTTTAATGAAGTGGATGCTTCATAATTTTGATGATGAGAATTGCAT
AAAGATACTGAGGAATTGTTACAAAGCTCTTCCAAATGATGGAAAGGTAC
TTGTTATTAACTCAACGTTGCCAGAAGTGCCTGACAGTACCGAGGCTTCA
AGGGATTCCTTCATTTTAGATGCAATTTTTTTAATCCAAATTCCTCATGG
AAGGGAGCGGACCAAAAAGGAGTTCACTGCATTGGCAATCGAAGCTGGAT
TTAAGGGTATCAACTTTGAATGTAACGTTTGCAATTCCTATGTCATGGAA
TTCTACAAGTAAACTTTGAAGCTAGATTGCTTCATTCTTTCTTTAT
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