FC873168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873168 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.090e-34 Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 2 Query: 2 FDPLVLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 217 FDPL LA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 194 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
BLAST of FC873168 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.090e-34 Identity = 68/72 (94.44%), Postives = 71/72 (98.61%), Query Frame = 2 Query: 2 FDPLVLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 217 FDPL LADDPEAFA++KVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 194 FDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of FC873168 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.090e-34 Identity = 68/72 (94.44%), Postives = 71/72 (98.61%), Query Frame = 2 Query: 2 FDPLVLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 217 FDPL LADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHL+DPVNNNAW+YATNFVPGK Sbjct: 197 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268
BLAST of FC873168 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.090e-34 Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 2 Query: 2 FDPLVLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 217 FDPL LADDPEAFAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 195 FDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
BLAST of FC873168 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.730e-34 Identity = 68/72 (94.44%), Postives = 71/72 (98.61%), Query Frame = 2 Query: 2 FDPLVLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 217 FDPL LA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQA+VTGKGPLENLADHLADPVNNNAW+YATNFVPGK Sbjct: 195 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
BLAST of FC873168 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.730e-34 Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 2 Query: 2 FDPLVLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 217 FDPL LADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA PVNNNAWAYATNFVPGK Sbjct: 192 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263
BLAST of FC873168 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.730e-34 Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 2 Query: 2 FDPLVLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 214 FDPL LADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWAYATNFVPG Sbjct: 191 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPG 261
BLAST of FC873168 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.565e-34 Identity = 68/72 (94.44%), Postives = 71/72 (98.61%), Query Frame = 2 Query: 2 FDPLVLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 217 FDPL LA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK Sbjct: 196 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
BLAST of FC873168 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.565e-34 Identity = 68/72 (94.44%), Postives = 71/72 (98.61%), Query Frame = 2 Query: 2 FDPLVLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 217 FDPL LA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADH+ADPVNNNAWA+ATNFVPGK Sbjct: 196 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
BLAST of FC873168 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 3.565e-34 Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 2 Query: 2 FDPLVLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 217 FDPL LADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW +ATNFVPGK Sbjct: 196 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267 The following BLAST results are available for this feature:
BLAST of FC873168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873168 ID=FC873168; Name=FC873168; organism=Citrus clementina; type=EST; length=459bpback to top |