FC873236

Overview
NameFC873236
Unique NameFC873236
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15335 contig Ccv1_Contig15335:20..854. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1C2_RABIT (Sulfotransferase 1C2 OS=Oryctolagus cuniculus GN=SULT1C2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.282e-18
Identity = 61/201 (30.35%), Postives = 102/201 (50.75%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAI-----INRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEI-SLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            F+AK  D+++ + PKSGTTW++ +   I     + +    +I   H               PF+E+         E +Q    PR+  TH+P     LLP     NN K +Y+ RN  D  +S +HF  +  +Q LP+  + EE F+ + +G + +G ++EH+ G+W   +K    +LFL Y+D+K+D    ++K+A F G
Sbjct:   35 FEAKPDDLLICTYPKSGTTWIQEIVDMIEQNGDVEKCQRALIQHRH---------------PFIEWARPPQPSGVEKAQAMPSPRILRTHLP---TRLLPPSFWENNCKFLYVARNVKDCMVSYYHF--QRMNQVLPDPGTWEEYFETFINGKVAWGSWFEHVKGWW--EVKGRYQILFLFYEDIKKDPKCEIRKVAQFMG 213          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1C3_HUMAN (Sulfotransferase 1C3 OS=Homo sapiens GN=SULT1C3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.287e-18
Identity = 62/195 (31.79%), Postives = 104/195 (53.33%), Query Frame = 3
Query:  234 HFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIAD--EPRVFATHIPFASLNLLPSM--NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASF 806
            +F+AK  D+ILA+ PKSGTTWM  +   I+N           G       +   D   FLE K + + + P+L  + +   P++  TH+P  S  + PS+   N KIVY+ RNP D  +S +HF         P+ +LEE ++ +  G +  G +++H+ G+W  + K  + +L+L Y+D+K+D    ++K+  F
Sbjct:   41 NFQAKPDDLILATYPKSGTTWMHEILDMILN----------DGDVEKCKRAQTLDRHAFLELK-FPHKEKPDLEFVLEMSSPQLIKTHLP--SHLIPPSIWKENCKIVYVARNPKDCLVSYYHFHRMASFMPDPQ-NLEEFYEKFMSGKVVGGSWFDHVKGWW--AAKDMHRILYLFYEDIKKDPKREIEKILKF 219          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1E1_MOUSE (Estrogen sulfotransferase, testis isoform OS=Mus musculus GN=Sult1e1 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.128e-17
Identity = 59/194 (30.41%), Postives = 100/194 (51.55%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNF-PIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASF 806
            F A+  D+++A+ PKSGTTW+  + + I    +      D   +  P L     DL+          N I +L +  + PR+  TH+P     LLP+     N K++Y+CRN  D  +S ++FL  + S   P+ S  E  + +  G + +G +++H+  +W +S  + + VLF+ Y+DMK+DI   + KL  F
Sbjct:   34 FLARPDDLVIATYPKSGTTWISEVVYMIYKEGDVEKCKEDAIFNRIPYLECRNEDLI----------NGIKQLKE-KESPRIVKTHLP---PKLLPASFWEKNCKMIYLCRNAKDVAVSYYYFLLMITSYPNPK-SFSEFVEKFMQGQVPYGSWYDHVKAWWEKS--KNSRVLFMFYEDMKEDIRREVVKLIEF 210          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST2S2_DANRE (Cytosolic sulfotransferase 2 OS=Danio rerio GN=sult1st2 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.629e-17
Identity = 65/205 (31.71%), Postives = 107/205 (52.20%), Query Frame = 3
Query:  231 KHFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHP-LLTSNP-HDLVPFLEYKLYANNQIPELSQIAD----EPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAF-KMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFGV 815
            K+F+A+  DI++A+ PK+GTTW+  +   +           + G+  P   TS P +  VPFLE        +P  +++AD     PR   TH+P   + L+P      N K+VY+ RN  D  +S +HF     + G PE      F + + DG   FGP+++H+ GYW +  +  +N+L++ Y+DM +D    + +L SF G+
Sbjct:   37 KNFQARPDDILIATYPKAGTTWVSYILDLL-----------YFGNESPERQTSQPIYMRVPFLEMCFQG---LPLGTELADTLPTSPRPIKTHLP---VQLVPKSFWEQNSKVVYVARNAKDNAVSYFHF--DRMNMGQPEPGDWNTFLQKFMDGRNVFGPWYDHVNGYWKKK-QTYSNILYMFYEDMVEDTGREVARLCSFLGL 221          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1S1_DANRE (Cytosolic sulfotransferase 1 OS=Danio rerio GN=sult1st1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.740e-17
Identity = 63/202 (31.19%), Postives = 108/202 (53.47%), Query Frame = 3
Query:  231 KHFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNP-HDLVPFLE--YKLYANNQIPELS-QIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFGV 815
            K+F+A+  DI++A+ PK+GTTW+  +   +   +N P   +H        TS P +  VPFLE  +K+ A+    EL+  +   PR+  TH+P   + L+P      N ++VY+ RN  D  +S +HF +++                + DG   FGP+++H+ GYW E  +  +N+L+L Y+D+ +D    + +L SF G+
Sbjct:   35 KNFQARPDDILIATYPKAGTTWVSYILDLLYFGENAP--EEH--------TSQPIYMRVPFLESCFKVIASG--TELADNMTTSPRLIKTHLP---VQLIPKSFWEQNSRVVYVARNAKDNVVSYFHF-DRMNIVEPDPGDWNTFLHRFMDGKSVFGPWYDHVNGYW-EKKQTYSNLLYLFYEDLVEDTGREVDRLCSFLGL 219          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1A2_HUMAN (Sulfotransferase 1A2 OS=Homo sapiens GN=SULT1A2 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.084e-17
Identity = 54/192 (28.12%), Postives = 95/192 (49.48%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            F+A+  D+++++ PKSGTTW+  +   I    +         H  P+        VPFLE+K+       E  +    PR+  TH+P A L        +K+VY+ RN  D  +S +HF +  +    P  + E   + +  G + +G +++H+  +W   L R + VL+L Y+DMK++    ++K+  F G
Sbjct:   34 FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDL-----EKCHRAPIFMR-----VPFLEFKVPGIPSGMETLKNTPAPRLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVYPHPG-TWESFLEKFMAGEVSYGSWYQHVQEWW--ELSRTHPVLYLFYEDMKENPKREIQKILEFVG 212          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1S3_DANRE (Cytosolic sulfotransferase 3 OS=Danio rerio GN=sult1st3 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.056e-16
Identity = 64/205 (31.22%), Postives = 109/205 (53.17%), Query Frame = 3
Query:  231 KHFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHP-LLTSNP-HDLVPFLEYKLYANNQIPELSQIAD----EPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAF-KMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFGV 815
            K+F+A+  DI++A+ PK+GTTW+  +   +           + G+  P   TS P +  VPFLE        IP  +++AD     PR+  TH+P   + L+P      N K+VY+ RN  D  +S +HF     + G PE      F + + +G   FGP+++H+ GYW +  +  +N+L++ Y+DM ++    +++L SF G+
Sbjct:   37 KNFQARPDDILIATYPKAGTTWVSYILDLL-----------YFGNESPERQTSQPIYMRVPFLE---ACFEGIPFGTELADNLPTSPRLIKTHLP---VQLVPKSFWEQNSKVVYVARNAKDNAVSYFHF--DRMNMGQPEPGDWNTFLQKFMEGRNVFGPWYDHVNGYWKKK-QTYSNILYMFYEDMVENTGREVERLCSFLGL 221          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1B1_RAT (Sulfotransferase family cytosolic 1B member 1 OS=Rattus norvegicus GN=Sult1b1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.056e-16
Identity = 58/196 (29.59%), Postives = 101/196 (51.53%), Query Frame = 3
Query:  231 KHFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKL-YANNQIPELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASF 806
            + F+++  DI++ + PKSGTTW+  +   ++N  N             ++TS     VP LE  +  A     EL +    PR+  TH+P   ++LLP     N  K++Y+ RN  D  +S +HF      Q LP  + EE  + +  G + +G +++H+  +W +    P  +LFL Y+D+K++    +KK+A+F
Sbjct:   32 EEFQSRPCDIVIPTYPKSGTTWLSEIVDMVLNDGNVEKCK------RDVITSK----VPMLEQNVPGARRSGVELLKKTPSPRIIKTHLP---IDLLPKSFWDNKCKMIYLARNGKDVAVSYYHFDLMNNIQPLPG-TWEEYLEKFLAGNVAYGSWFDHVKSWWEKREGHP--ILFLYYEDLKKNPKKEIKKIANF 211          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST3A1_MOUSE (Amine sulfotransferase OS=Mus musculus GN=Sult3a1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.379e-16
Identity = 57/215 (26.51%), Postives = 107/215 (49.77%), Query Frame = 3
Query:  165 FLYKFQGYWCQAKEIQA-IMAFQKHFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASF 806
            +L  F+GY  Q   ++  ++   ++++ +D DI + + PKSGT W + +   I             GH +        D  PF EY ++  +     S     PR+F++HIP+  +         KI+Y+ RNP D  IS +HF N +     P+ ++E   + + DG +    +++H+ G++    +   N++F+ ++DMK+D  S++ K+ SF
Sbjct:    7 YLLNFKGYNFQKTLVKMEVVENIENYEIRDDDIFIVTYPKSGTIWTQQILSLIY----------FEGHRNRTENIETIDRAPFFEYNIHKLDYAKMPS-----PRIFSSHIPYYLVPKGLKDKKAKILYMYRNPKDVLISYFHFSNLMLIFQNPD-TVESFMQTFLDGDVVGSLWFDHIRGWYEH--RHDFNIMFMSFEDMKKDFRSSVLKICSF 203          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1C1_RAT (Sulfotransferase 1C1 OS=Rattus norvegicus GN=Sult1c1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.379e-16
Identity = 59/195 (30.26%), Postives = 103/195 (52.82%), Query Frame = 3
Query:  234 HFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYAN-NQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHF--LNKLRSQGLPEI-SLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASF 806
            +F+AK  D+++A+  K+GTTW + +   I N           G       +N +D  PF+E+ L +  N   +L+     PR   TH+P   L       N KI+Y+ RN  D  +S ++F  +NK+    LP+  +L E  + +  G + +G +++H+ G+W+  +K  + +L+L Y+DMK+D    +KK+A F
Sbjct:   41 NFQAKPDDLLIATYAKAGTTWTQEIVDMIQN----------DGDVQKCQRANTYDRHPFIEWTLPSPLNSGLDLANKMPSPRTLKTHLPVHMLPPSFWKENSKIIYVARNAKDCLVSYYYFSRMNKM----LPDPGTLGEYIEQFKAGKVLWGSWYDHVKGWWD--VKDQHRILYLFYEDMKEDPKREIKKIAKF 219          
The following BLAST results are available for this feature:
BLAST of FC873236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ST1C2_RABIT3.282e-1830.35Sulfotransferase 1C2 OS=Oryctolagus cuniculus GN=S... [more]
ST1C3_HUMAN4.287e-1831.79Sulfotransferase 1C3 OS=Homo sapiens GN=SULT1C3 PE... [more]
ST1E1_MOUSE2.128e-1730.41Estrogen sulfotransferase, testis isoform OS=Mus m... [more]
ST2S2_DANRE3.629e-1731.71Cytosolic sulfotransferase 2 OS=Danio rerio GN=sul... [more]
ST1S1_DANRE4.740e-1731.19Cytosolic sulfotransferase 1 OS=Danio rerio GN=sul... [more]
ST1A2_HUMAN8.084e-1728.13Sulfotransferase 1A2 OS=Homo sapiens GN=SULT1A2 PE... [more]
ST1S3_DANRE1.056e-1631.22Cytosolic sulfotransferase 3 OS=Danio rerio GN=sul... [more]
ST1B1_RAT1.056e-1629.59Sulfotransferase family cytosolic 1B member 1 OS=R... [more]
ST3A1_MOUSE1.379e-1626.51Amine sulfotransferase OS=Mus musculus GN=Sult3a1 ... [more]
ST1C1_RAT1.379e-1630.26Sulfotransferase 1C1 OS=Rattus norvegicus GN=Sult1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DF04FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873236 ID=FC873236; Name=FC873236; organism=Citrus clementina; type=EST; length=835bp
CAACCAAAGATCTCTAAACAAGAAGAAACATGCCAAGCTCTACTATCACC
ACCATCACCCACTTCACAAGAACCCAAATAGCAGATGAAGAAGAAAAGCA
CTTAAGCAGTGAGTGCAAGGAAGTGCTTCTTTCACTTCCTAAAGAAAGAG
GTTGGCGAACGGCTTTTCTTTATAAGTTCCAGGGGTATTGGTGCCAGGCA
AAGGAGATTCAAGCCATAATGGCTTTCCAAAAGCACTTCAAAGCAAAAGA
CACTGATATCATTTTAGCCAGCATACCAAAATCAGGCACCACTTGGATGA
AAGCATTGTCTTTTGCAATAATCAATCGCAAGAATTTCCCCATAATTAGT
GATCATCATGGTCATCATCACCCCCTGCTTACTTCAAATCCTCATGATCT
TGTTCCTTTTCTTGAATACAAGCTCTATGCAAATAACCAAATTCCTGAGC
TTTCTCAAATTGCTGATGAGCCTAGAGTTTTTGCCACCCATATTCCATTT
GCTTCCTTAAATTTGCTTCCTTCAATGAACAACATTAAGATTGTTTATAT
TTGCAGAAACCCTTTTGATACTTTCATCTCTTCATGGCATTTTCTTAACA
AATTGAGGTCTCAAGGATTACCTGAAATTTCACTAGAGGAAGCATTCAAA
ATGTACTGTGATGGTGTCATTGGGTTCGGTCCATTTTGGGAGCATATGTT
AGGGTATTGGAATGAGAGCTTGAAGAGACCAAACAATGTCTTGTTTTTGA
AGTATGACGATATGAAACAAGACATTGTGTCAAATTTGAAGAAATTGGCA
AGCTTTTTTGGGGTTCCCTTTTTCTCCCTGAGGAA
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