FC873236

Overview
NameFC873236
Unique NameFC873236
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1C2_RAT (Sulfotransferase 1C2 OS=Rattus norvegicus GN=Sult1c2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.801e-16
Identity = 56/198 (28.28%), Postives = 96/198 (48.48%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAI-----INRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEI-SLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            FKAK  D+++ + PKSGTTW++ +   I     + +    II   H               PF+E+         + +     PR+  TH+P   L      NN K +Y+ RN  D  +S +HF     SQ LP+  +  E F+ + +G + +G +++H+ G+W   ++    +LFL Y+D+K+D    ++K+  F G
Sbjct:   35 FKAKPDDLLICTYPKSGTTWIQEIVDMIEQNGDVEKCQRTIIQHRH---------------PFIEWARPPQPSGVDKANAMPAPRILRTHLPTQLLPPSFWTNNCKFLYVARNAKDCMVSYYHFYR--MSQVLPDPGTWNEYFETFINGKVSWGSWFDHVKGWW--EIRDRYQILFLFYEDVKRDPKREIQKVMQFMG 213          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1A1_HUMAN (Sulfotransferase 1A1 OS=Homo sapiens GN=SULT1A1 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.801e-16
Identity = 55/193 (28.50%), Postives = 96/193 (49.74%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAF-KMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            F+A+  D+++++ PKSGTTW+  +   I    +         H  P+        VPFLE+K        E  +    PR+  TH+P A L        +K+VY+ RN  D  +S +HF +  +    PE    ++F + +  G + +G +++H+  +W   L R + VL+L Y+DMK++    ++K+  F G
Sbjct:   34 FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDL-----EKCHRAPIFMR-----VPFLEFKAPGIPSGMETLKDTPAPRLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVH--PEPGTWDSFLEKFMVGEVSYGSWYQHVQEWW--ELSRTHPVLYLFYEDMKENPKREIQKILEFVG 212          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: SUHA_CAVPO (3-alpha-hydroxysteroid sulfotransferase OS=Cavia porcellus GN=STD1 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.352e-16
Identity = 58/196 (29.59%), Postives = 102/196 (52.04%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPH-DLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            F  KD D I  + PKSGT W+  +   I+++ +             L+ S P+ D  P++E+         EL +   +PRV+ +H+P   L+L P     +  K++Y  RNP D  +S + FL+K+     PE +L++  + +  G + +G ++EH+ G+   S++   NVL L Y+D+ +D  S ++K+  F G
Sbjct:   30 FLVKDEDTITVTYPKSGTNWLNEIVCLILSKGD-----------PKLVQSVPNWDRSPWIEF-----TGGYELVKGQKDPRVYTSHLP---LHLFPKSFFSSKAKVIYCIRNPRDALVSGYFFLSKMNVTEKPE-TLQQYMEWFLQGNVIYGSWFEHVRGWL--SMREMENVLVLSYEDLIKDTRSTVEKICQFLG 203          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1C2_MOUSE (Sulfotransferase 1C2 OS=Mus musculus GN=Sult1c2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.352e-16
Identity = 56/198 (28.28%), Postives = 97/198 (48.99%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAI-----INRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEI-SLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            F+AK  D+++ + PKSGTTW++ +   I     + +    II   H               PF+E+         + +     PR+  TH+P   L      NN K +Y+ RN  D  +S +HF     SQ LPE  + +E F+ + +G + +G +++H+ G+W   ++    +LFL Y+DMK++    ++K+  F G
Sbjct:   35 FEAKPDDLLICTYPKSGTTWIQEIVDMIEQNGDVEKCRRTIIQHRH---------------PFIEWARPPQPSGVDKANEMPAPRILRTHLPTQLLPPSFWTNNCKFLYVARNAKDCMVSYYHFYR--MSQVLPEPGTWDEYFETFINGKVSWGSWFDHVKGWW--EIRDKYQILFLFYEDMKRNPKHEIQKVMQFMG 213          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST4A1_HUMAN (Sulfotransferase 4A1 OS=Homo sapiens GN=SULT4A1 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.072e-16
Identity = 54/194 (27.84%), Postives = 102/194 (52.58%), Query Frame = 3
Query:  234 HFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFGV 815
            +F  + +D+ + + PKSGT+ ++ + + +    +     D  G        N  + +P LEY     + I EL+     PR+  +H+P+  L       + K++Y+ RNP D  +S + F   LR+      + +E  + + +  +G+G ++EH+  +W   +   +NVLFLKY+DM +D+V+ +++LA F GV
Sbjct:   40 NFPVRPSDVWIVTYPKSGTSLLQEVVYLVSQGAD----PDEIG------LMNIDEQLPVLEYPQPGLDIIKELTS----PRLIKSHLPYRFLPSDLHNGDSKVIYMARNPKDLVVSYYQFHRSLRTMSYRG-TFQEFCRRFMNDKLGYGSWFEHVQEFWEHRMD--SNVLFLKYEDMHRDLVTMVEQLARFLGV 216          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1E6_RAT (Estrogen sulfotransferase, isoform 6 OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.072e-16
Identity = 57/194 (29.38%), Postives = 99/194 (51.03%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIIS-DHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASF 806
            F A+  D+++ + PKSG+TW+  +   I    +      D   +  P L     DL+          N I +L +  + PR+  TH+P     LLP+     N KI+Y+CRN  D  +S ++F   ++S   P+ S  E  + + +G + +G +++H+  +W +S  + + VLF+ Y+DMK+DI   + KL  F
Sbjct:   34 FSARPDDLLVVTYPKSGSTWIGEIVDMIYKEGDVEKCKEDAIFNRIPYLECRNEDLI----------NGIKQLKE-KESPRIVKTHLP---AKLLPASFWEKNCKIIYLCRNAKDVVVSYYYFFLIIKSYPNPK-SFSEFVEKFMEGQVPYGSWYDHVKSWWEKS--KNSRVLFMFYEDMKEDIRREVVKLIEF 210          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1E2_RAT (Estrogen sulfotransferase, isoform 2 OS=Rattus norvegicus GN=Ste2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.072e-16
Identity = 57/194 (29.38%), Postives = 99/194 (51.03%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIIS-DHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASF 806
            F A+  D+++ + PKSG+TW+  +   I    +      D   +  P L     DL+          N I +L +  + PR+  TH+P     LLP+     N KI+Y+CRN  D  +S ++F   ++S   P+ S  E  + + +G + +G +++H+  +W +S  + + VLF+ Y+DMK+DI   + KL  F
Sbjct:   34 FSARPDDLLVVTYPKSGSTWIGEIVDMIYKEGDVEKCKEDAIFNRIPYLECRNEDLI----------NGIKQLKE-KESPRIVKTHLP---AKLLPASFWEKNCKIIYLCRNAKDVVVSYYYFFLIMKSYPNPK-SFSEFVEKFMEGQVPYGSWYDHVKSWWEKS--KNSRVLFMFYEDMKEDIRREVVKLIEF 210          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1E1_BOVIN (Estrogen sulfotransferase OS=Bos taurus GN=SULT1E1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.072e-16
Identity = 56/195 (28.72%), Postives = 100/195 (51.28%), Query Frame = 3
Query:  231 KHFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKL-YANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            + F+A+  D+++ + PKSGTTW+  +   I N          +G           + VP+LE    +    + +L+++A  PR+  +H+P   L +     N KI+Y+ RN  D  +S +  +  + +   P+ S ++  + + DG + +G ++EH   +W +S K P  VLFL Y+DMK++I   + KL  F G
Sbjct:   32 EEFEARPDDLVIVTYPKSGTTWLSEIICMIYN----------NGDVEKCKEDVIFNRVPYLECSTEHVMKGVKQLNEMA-SPRIVKSHLPVKLLPVSFWEKNCKIIYLSRNAKDVVVSYYFLILMVTAIPDPD-SFQDFVEKFMDGEVPYGSWFEHTKSWWEKS-KNP-QVLFLFYEDMKENIRKEVMKLLEFLG 212          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1B1_CHICK (Sulfotransferase family cytosolic 1B member 1 OS=Gallus gallus GN=SULT1B1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.072e-16
Identity = 62/222 (27.93%), Postives = 107/222 (48.20%), Query Frame = 3
Query:  189 WCQAKEIQAIMAFQKH------FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIP---ELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHF--LNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            W     I  + AF ++      F+++  DI++A+ PKSGTTW+  +   I+            G           + VP LE+   A  Q+P   E  +    PR+  THIP    ++LP      + K++Y+ RN  D  +S +HF  +NKL        + ++  + +  G + +G +++H+ GYW    + P  +L+L Y+DMK+D+   + K+A F G
Sbjct:   12 WSTVHAIPMVSAFAQNWERVDNFQSRPDDIVVATFPKSGTTWISEIVDMIL----------QGGDPKKCKRDAIVNRVPMLEFA--APGQMPAGTEQLENMPSPRIIKTHIP---ADILPKSFWDKSCKMIYVGRNAKDVAVSYYHFDLMNKLHPH---PGTWDQYLEAFMAGKVAYGSWFDHVRGYWERRQEHP--ILYLFYEDMKEDLRREVAKVAQFLG 213          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1E3_RAT (Estrogen sulfotransferase, isoform 3 OS=Rattus norvegicus GN=Ste PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.240e-16
Identity = 57/194 (29.38%), Postives = 99/194 (51.03%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIIS-DHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASF 806
            F A+  D+++ + PKSG+TW+  +   I    +      D   +  P L     DL+          N I +L +  + PR+  TH+P     LLP+     N KI+Y+CRN  D  +S ++F   ++S   P+ S  E  + + +G + +G +++H+  +W +S  + + VLF+ Y+DMK+DI   + KL  F
Sbjct:   34 FLARPDDLLIVTYPKSGSTWISEIVDMIYKEGDVEKCKEDALFNRIPDLECRNEDLI----------NGIKQLKE-KESPRIVKTHLP---AKLLPASFWEKNCKIIYLCRNAKDVVVSYYYFFLIMKSYPNPK-SFSEFVEKFMEGQVPYGSWYDHVKSWWEKS--KNSRVLFMFYEDMKEDIRREVVKLIEF 210          
The following BLAST results are available for this feature:
BLAST of FC873236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ST1C2_RAT1.801e-1628.28Sulfotransferase 1C2 OS=Rattus norvegicus GN=Sult1... [more]
ST1A1_HUMAN1.801e-1628.50Sulfotransferase 1A1 OS=Homo sapiens GN=SULT1A1 PE... [more]
SUHA_CAVPO2.352e-1629.593-alpha-hydroxysteroid sulfotransferase OS=Cavia p... [more]
ST1C2_MOUSE2.352e-1628.28Sulfotransferase 1C2 OS=Mus musculus GN=Sult1c2 PE... [more]
ST4A1_HUMAN3.072e-1627.84Sulfotransferase 4A1 OS=Homo sapiens GN=SULT4A1 PE... [more]
ST1E6_RAT3.072e-1629.38Estrogen sulfotransferase, isoform 6 OS=Rattus nor... [more]
ST1E2_RAT3.072e-1629.38Estrogen sulfotransferase, isoform 2 OS=Rattus nor... [more]
ST1E1_BOVIN3.072e-1628.72Estrogen sulfotransferase OS=Bos taurus GN=SULT1E1... [more]
ST1B1_CHICK3.072e-1627.93Sulfotransferase family cytosolic 1B member 1 OS=G... [more]
ST1E3_RAT5.240e-1629.38Estrogen sulfotransferase, isoform 3 OS=Rattus nor... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DF04FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873236 ID=FC873236; Name=FC873236; organism=Citrus clementina; type=EST; length=835bp
CAACCAAAGATCTCTAAACAAGAAGAAACATGCCAAGCTCTACTATCACC
ACCATCACCCACTTCACAAGAACCCAAATAGCAGATGAAGAAGAAAAGCA
CTTAAGCAGTGAGTGCAAGGAAGTGCTTCTTTCACTTCCTAAAGAAAGAG
GTTGGCGAACGGCTTTTCTTTATAAGTTCCAGGGGTATTGGTGCCAGGCA
AAGGAGATTCAAGCCATAATGGCTTTCCAAAAGCACTTCAAAGCAAAAGA
CACTGATATCATTTTAGCCAGCATACCAAAATCAGGCACCACTTGGATGA
AAGCATTGTCTTTTGCAATAATCAATCGCAAGAATTTCCCCATAATTAGT
GATCATCATGGTCATCATCACCCCCTGCTTACTTCAAATCCTCATGATCT
TGTTCCTTTTCTTGAATACAAGCTCTATGCAAATAACCAAATTCCTGAGC
TTTCTCAAATTGCTGATGAGCCTAGAGTTTTTGCCACCCATATTCCATTT
GCTTCCTTAAATTTGCTTCCTTCAATGAACAACATTAAGATTGTTTATAT
TTGCAGAAACCCTTTTGATACTTTCATCTCTTCATGGCATTTTCTTAACA
AATTGAGGTCTCAAGGATTACCTGAAATTTCACTAGAGGAAGCATTCAAA
ATGTACTGTGATGGTGTCATTGGGTTCGGTCCATTTTGGGAGCATATGTT
AGGGTATTGGAATGAGAGCTTGAAGAGACCAAACAATGTCTTGTTTTTGA
AGTATGACGATATGAAACAAGACATTGTGTCAAATTTGAAGAAATTGGCA
AGCTTTTTTGGGGTTCCCTTTTTCTCCCTGAGGAA
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