FC873236

Overview
NameFC873236
Unique NameFC873236
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1A1_RAT (Sulfotransferase 1A1 OS=Rattus norvegicus GN=Sult1a1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.991e-15
Identity = 55/197 (27.92%), Postives = 97/197 (49.24%), Query Frame = 3
Query:  231 KHFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            ++F A   D+++++ PKSGTTWM  +   I             G       +  +  VPFLE+K        E  +    PR+  TH+P   L+LLP       +K++YI RN  D  +S ++F N  +    P  + +   + + DG + +G +++H+  +W   L+  + VL+L Y+D+K++    +KK+  F G
Sbjct:   28 QNFTAWPDDLLISTYPKSGTTWMSEILDMIYQG----------GKLEKCGRAPIYARVPFLEFKCPGVPSGLETLEETPAPRLLKTHLP---LSLLPQSLLDQKVKVIYIARNAKDVVVSYYNFYNMAKLHPDPG-TWDSFLENFMDGEVSYGSWYQHVKEWW--ELRHTHPVLYLFYEDIKENPKREIKKILEFLG 208          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: SUH3_RAT (Alcohol sulfotransferase OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-15
Identity = 54/195 (27.69%), Postives = 102/195 (52.31%), Query Frame = 3
Query:  231 KHFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNP-HDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            K F  K+ D+I+ + PKSGT W+  +   +I  K  P            + S P  D  P++E      +   +L+++ + PR+  +H+P    +     +  K++Y+ RNP D  +S++ F +K+  +  P+ SL    + +  G + +G ++EH+ G+   S++  +N L L Y+DMK+D + ++KK+  F G
Sbjct:   28 KKFVVKEDDLIILTYPKSGTNWLIEI-VCLIQTKGDP----------KWIQSMPIWDRSPWIE----TGSGYDKLTKM-EGPRLMTSHLPMHLFSKSLFSSKAKVIYLIRNPRDVLVSAYFFWSKIALEKKPD-SLGTYVEWFLKGNVAYGSWFEHIRGWL--SMREWDNFLVLYYEDMKKDTMGSIKKICDFLG 203          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1A1_MOUSE (Sulfotransferase 1A1 OS=Mus musculus GN=Sult1a1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-15
Identity = 55/197 (27.92%), Postives = 96/197 (48.73%), Query Frame = 3
Query:  231 KHFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            ++F A   D+++++ PKSGT WM  +   I          D  G       +  +  +PFLE+         E  +    PR+  TH+P   L+LLP       IK++Y+ RN  D  +S ++F    +    P  + E   + + DG + +G +++H+  +W   L+R + VL+L Y+DMK++    +KK+  F G
Sbjct:   28 QNFTAWPDDVLISTYPKSGTNWMSEIMDMIYQGGKL----DKCGR------APVYARIPFLEFSCPGVPPGLETLKETPAPRIIKTHLP---LSLLPQSLLDQKIKVIYVARNAKDVVVSYYNFYKMAKLHPDPG-TWESFLENFMDGKVSYGSWYQHVKEWW--ELRRTHPVLYLFYEDMKENPKREIKKILEFLG 208          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1A1_MACFA (Sulfotransferase 1A1 OS=Macaca fascicularis GN=SULT1A1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-15
Identity = 54/193 (27.98%), Postives = 94/193 (48.70%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAF-KMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            F+A+  D+++++ PKSGTTW+  +   I    +            P+        VPFLE+K+       E  +    PR+  TH+P A L        +K+VY+ RN  D  +S +HF +  +    PE    ++F + +  G + +G +++H+  +W  S   P  VL+L Y+DMK++    + K+  F G
Sbjct:   34 FRARPDDLLISTYPKSGTTWVSQILDMIYQGGDL-----EKCRRAPIFMR-----VPFLEFKVPGIPSGMETLKDTPAPRLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVH--PEPGTWDSFLEKFMAGEVSYGSWYQHVQEWWELSHTHP--VLYLFYEDMKENPKREIWKILEFVG 212          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1A1_CANFA (Sulfotransferase 1A1 OS=Canis familiaris GN=SULT1A1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-15
Identity = 52/192 (27.08%), Postives = 92/192 (47.92%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            F+A+  D+++++ PKSGTTW+  +   I             G       +     VPFLE+K        E+ +    PR+  TH+P A L        +K+VY+ RN  D  +S +HF    +    P+ + +   + +  G + +G +++H+  +W  S   P  VL+L Y+DMK++    ++K+  F G
Sbjct:   34 FQAQPDDLLISTYPKSGTTWVSEILDMIYQ----------DGDVEKCRRAPVFIRVPFLEFKAPGIPTGLEVLKDTPAPRLIKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYYHFYRMAKVHPDPD-TWDSFLEKFMAGEVSYGSWYQHVQEWWELSHTHP--VLYLFYEDMKENPKREIQKILKFVG 212          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1B1_MOUSE (Sulfotransferase family cytosolic 1B member 1 OS=Mus musculus GN=Sult1b1 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.794e-15
Identity = 56/196 (28.57%), Postives = 99/196 (50.51%), Query Frame = 3
Query:  231 KHFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANN-QIPELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASF 806
            + F++   DI++ + PKSGTTW+  +   ++N  N             ++TS     VP LE  +        EL +    PR+  TH+P   ++LLP     N  K++Y+ RN  D  +S +HF        LP  + EE  + +  G + +G +++H+  +W +  + P  +L+L Y+++KQ+    +KK+ASF
Sbjct:   32 EEFQSTPGDIVITTYPKSGTTWLSEIVDMVLNDGNVEKCK------RDVITSK----VPMLELSVPGIRISGVELLKKTPSPRIIKTHLP---IDLLPKSFWENKCKMIYLARNGKDVAVSYYHFDLMNSINPLPG-TWEEYLEKFLAGNVAYGSWFDHVKSWWEKREEHP--LLYLYYEELKQNPKKEIKKIASF 211          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: S1C2A_RAT (Sulfotransferase 1C2A OS=Rattus norvegicus GN=Sult1c2a PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.794e-15
Identity = 53/197 (26.90%), Postives = 92/197 (46.70%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAI-----INRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            FKAK  D+++ + PKSGTTW++ +   I     + +    II   H               P +E+         + +     PR+  TH+P   L      NN K +Y+ RN  D  +S +HF    +    P  +  E F+ + +G + +G +++H+ G+W   ++    +LFL Y+DMK+D    ++K+  F G
Sbjct:   35 FKAKPDDLLICTYPKSGTTWIQEIVNMIEQNGDVEKCQRTIIQHRH---------------PVIEWARPPQPSGVDKANAMPAPRILRTHLPPQLLPPSFWTNNCKYLYVARNAKDCMVSYYHFYRMCQVLPNPG-TWNEYFETFINGKVSWGSWFDHVKGWW--EIRDRYQILFLFYEDMKRDPKREIQKVMQFMG 213          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1A3_HUMAN (Sulfotransferase 1A3/1A4 OS=Homo sapiens GN=SULT1A3 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.686e-14
Identity = 53/193 (27.46%), Postives = 94/193 (48.70%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAF-KMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            F+A+  D+++ + PKSGTTW+  +   I    +         +  P+        VPFLE          E  +    PR+  +H+P A L        +K+VY+ RNP D  +S +HF    ++   PE    ++F + +  G + +G +++H+  +W   L R + VL+L Y+DMK++    ++K+  F G
Sbjct:   34 FQARPDDLLINTYPKSGTTWVSQILDMIYQGGDL-----EKCNRAPIYVR-----VPFLEVNDPGEPSGLETLKDTPPPRLIKSHLPLALLPQTLLDQKVKVVYVARNPKDVAVSYYHFHRMEKAH--PEPGTWDSFLEKFMAGEVSYGSWYQHVQEWW--ELSRTHPVLYLFYEDMKENPKREIQKILEFVG 212          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST6B1_MOUSE (Sulfotransferase 6B1 OS=Mus musculus GN=Sult6b1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.875e-14
Identity = 59/219 (26.94%), Postives = 104/219 (47.49%), Query Frame = 3
Query:  192 CQAKEIQAIMAFQKHFKAKDTDIILASIPKSGTTWM----KALSFAIINRK----NFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEI----SLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            C  +  +A+ AF+    A+  D++LAS PK G+ W+      L FA+  +K     FP++                D   +   KL+ +            PR+  TH+ +  L      N  KI+ I RNP DT +S +HF N      +P+I    S +E F+ +  G + +G +++  +  WN+ +    NV F+ Y+D+K+++V  +K+++ F G
Sbjct:   40 CTQETFRALDAFE----ARSDDVLLASYPKCGSNWILHIVSELIFAVSKKKYACPEFPVLECG-------------DAEKYQRMKLFPS------------PRILTTHLHYDKLPQSIFKNKAKILVIFRNPKDTAVSFFHFHN-----DVPDIPSYASWDEFFRQFIKGQVSWGSYFDFAIN-WNKHID-DENVKFILYEDLKENLVVGIKQISEFLG 222          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1E1_CAVPO (Estrogen sulfotransferase OS=Cavia porcellus GN=SULT1E1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.875e-14
Identity = 63/225 (28.00%), Postives = 105/225 (46.67%), Query Frame = 3
Query:  153 WRTAFLYK-FQGYWCQAKEIQAIMAFQKHFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKL-YANNQIPELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            +R   LYK F  YW   +           F+A+  D+++A+ PKSGTTW+  +   I             G           + VPFLE +     N + +L ++ + PR+  TH+P     LLP+       K++ ICRN  D  +S ++F   + +   P  S  E  + +  G + +G +++H+  +W +S      +LF+ Y+DMK+DI   + KL  F G
Sbjct:   16 FRGILLYKQFIKYWDNVEA----------FQARPDDLVIAAYPKSGTTWISEVVCMIY----------AEGDVKKCRQDAIFNRVPFLECRNDKMMNGVKQLEEM-NSPRIIKTHLP---PRLLPASFWEKRCKMICICRNAKDVAVSYYYFFLMVANHPDPG-SFPEFVEKFMQGQVPYGSWYDHVKSWWEKS--TDPRILFIFYEDMKEDIRKEVLKLIHFLG 213          
The following BLAST results are available for this feature:
BLAST of FC873236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ST1A1_RAT1.991e-1527.92Sulfotransferase 1A1 OS=Rattus norvegicus GN=Sult1... [more]
SUH3_RAT3.397e-1527.69Alcohol sulfotransferase OS=Rattus norvegicus PE=2... [more]
ST1A1_MOUSE3.397e-1527.92Sulfotransferase 1A1 OS=Mus musculus GN=Sult1a1 PE... [more]
ST1A1_MACFA3.397e-1527.98Sulfotransferase 1A1 OS=Macaca fascicularis GN=SUL... [more]
ST1A1_CANFA3.397e-1527.08Sulfotransferase 1A1 OS=Canis familiaris GN=SULT1A... [more]
ST1B1_MOUSE5.794e-1528.57Sulfotransferase family cytosolic 1B member 1 OS=M... [more]
S1C2A_RAT5.794e-1526.90Sulfotransferase 1C2A OS=Rattus norvegicus GN=Sult... [more]
ST1A3_HUMAN1.686e-1427.46Sulfotransferase 1A3/1A4 OS=Homo sapiens GN=SULT1A... [more]
ST6B1_MOUSE2.875e-1426.94Sulfotransferase 6B1 OS=Mus musculus GN=Sult6b1 PE... [more]
ST1E1_CAVPO2.875e-1428.00Estrogen sulfotransferase OS=Cavia porcellus GN=SU... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DF04FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873236 ID=FC873236; Name=FC873236; organism=Citrus clementina; type=EST; length=835bp
CAACCAAAGATCTCTAAACAAGAAGAAACATGCCAAGCTCTACTATCACC
ACCATCACCCACTTCACAAGAACCCAAATAGCAGATGAAGAAGAAAAGCA
CTTAAGCAGTGAGTGCAAGGAAGTGCTTCTTTCACTTCCTAAAGAAAGAG
GTTGGCGAACGGCTTTTCTTTATAAGTTCCAGGGGTATTGGTGCCAGGCA
AAGGAGATTCAAGCCATAATGGCTTTCCAAAAGCACTTCAAAGCAAAAGA
CACTGATATCATTTTAGCCAGCATACCAAAATCAGGCACCACTTGGATGA
AAGCATTGTCTTTTGCAATAATCAATCGCAAGAATTTCCCCATAATTAGT
GATCATCATGGTCATCATCACCCCCTGCTTACTTCAAATCCTCATGATCT
TGTTCCTTTTCTTGAATACAAGCTCTATGCAAATAACCAAATTCCTGAGC
TTTCTCAAATTGCTGATGAGCCTAGAGTTTTTGCCACCCATATTCCATTT
GCTTCCTTAAATTTGCTTCCTTCAATGAACAACATTAAGATTGTTTATAT
TTGCAGAAACCCTTTTGATACTTTCATCTCTTCATGGCATTTTCTTAACA
AATTGAGGTCTCAAGGATTACCTGAAATTTCACTAGAGGAAGCATTCAAA
ATGTACTGTGATGGTGTCATTGGGTTCGGTCCATTTTGGGAGCATATGTT
AGGGTATTGGAATGAGAGCTTGAAGAGACCAAACAATGTCTTGTTTTTGA
AGTATGACGATATGAAACAAGACATTGTGTCAAATTTGAAGAAATTGGCA
AGCTTTTTTGGGGTTCCCTTTTTCTCCCTGAGGAA
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