FC873236

Overview
NameFC873236
Unique NameFC873236
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length835
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1B1_BOVIN (Sulfotransferase family cytosolic 1B member 1 OS=Bos taurus GN=SULT1B1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14
Identity = 56/197 (28.43%), Postives = 100/197 (50.76%), Query Frame = 3
Query:  231 KHFKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKL--YANNQIPELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASF 806
            + F+++  DI++ + PKSGTTW+  +   +++        D       ++T+     VP LE  L     + + +L +    PRV  TH+P   ++L+P     NN KI+Y+ RN  D  +S +HF      Q LP  +  E  + +  G + +G ++ H+  +W +  K  + +LFL Y+DMK++    +KK+  F
Sbjct:   32 EQFQSRPDDIMIVTYPKSGTTWISEIVDMVLHD------GDVEKCKRDVITAK----VPMLELALPGLRTSGLEQLEK-NPSPRVVKTHLP---IDLIPKSFWENNCKIIYLARNAKDVAVSFYHFDLMNNLQPLPG-TWGEYLEKFLTGNVAYGSWFNHVKSWWKK--KEGHPILFLFYEDMKENPKQEIKKVVRF 211          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST1A1_BOVIN (Sulfotransferase 1A1 OS=Bos taurus GN=SULT1A1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.755e-14
Identity = 52/192 (27.08%), Postives = 90/192 (46.88%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            F+A   D+++++ PKSGTTW+  +   I    +            P+        VPFLE+         EL +    PR+  TH+P A L        +K++YI RN  D  +S +HF    +    P  + +   + +  G + +G +++H+  +W  S   P  VL+L Y+D+K+D    ++K+  F G
Sbjct:   34 FEAWPDDLLISTYPKSGTTWVSEILDLIYQEGDL-----EKCQRAPVFLR-----VPFLEFSAPGVPTGVELLKDTPAPRLLKTHLPLALLPKTLLDQKVKVIYIARNAKDVAVSYYHFYRMAKVHPDPG-TWDSFLEKFMAGEVCYGSWYQHVQEWWELSHTHP--VLYLFYEDIKEDPKREIQKILEFIG 212          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: SUHB_CAVPO (3-beta-hydroxysteroid sulfotransferase OS=Cavia porcellus GN=STD2 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.905e-14
Identity = 53/195 (27.18%), Postives = 100/195 (51.28%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            F  KD D I  + PKSGT W+  +   I+++          G    + +    D  P++E + + N    EL +   +PR++ +H+P   L+L P     +  K++Y  RNP D  +S ++F +K++    PE +L++  K +  G + +G ++EH+  +   S++   N L L Y+++ +D  S ++K+  F G
Sbjct:   30 FLVKDEDTITVTYPKSGTNWLIEIVCLILSK----------GDPKWVQSVPIWDRSPWIETQ-HGN----ELMKSQKDPRIYTSHLP---LHLFPKSFFSSKAKVIYCIRNPRDVLVSGYYFTSKMKIAEKPE-TLQQYMKWFLQGNVIYGSWFEHVRDWL--SMREKENFLVLSYEELIKDTRSIVEKICQFLG 203          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST2A2_RAT (Alcohol sulfotransferase A OS=Rattus norvegicus GN=St2a2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.427e-13
Identity = 52/192 (27.08%), Postives = 92/192 (47.92%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            F  K+ D+IL + PKSGT W+  +   +I  K  P           + +    D  P++E  L  +  I +       PR+  +H+P    +     +  K++Y+ RNP D  +S ++F  K      P+ SL    + +  G + +G ++EH+  +   S++  +N L L Y+DMK+D +  +KK+  F G
Sbjct:   29 FVVKEEDLILLTYPKSGTNWLIEI-VCLIQTKGDP---------KWIQSVTIWDRSPWIETDLGYDMLIKKKG-----PRLITSHLPMHLFSKSLFSSKAKVIYLIRNPRDVLVSGYYFWGKTTLAKKPD-SLGTYVEWFLKGYVPYGSWFEHIRAWL--SMRELDNFLLLYYEDMKKDTMGTIKKICDFLG 202          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST2A2_MOUSE (Bile salt sulfotransferase 2 OS=Mus musculus GN=Sult2a2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.208e-12
Identity = 53/195 (27.18%), Postives = 95/195 (48.72%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHF---LNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            F  K+ D+++ + PKSGT W+  +   +I  K  P           + T    D  P++E ++  +  I +     + PR+  +H+P    +     +  K +Y+ RNP D  +S + F    N +++ G    SL   F+ +  G + FG ++EH+ G+   S++  +N L L Y+DMK+D    +KK+  F G
Sbjct:   30 FVVKEEDLLILTYPKSGTNWLNEI-VCLIQTKGDP---------KWIQTVPIWDRSPWIETEIGYSAIINK-----EGPRLITSHLPIHLFSKSFFSSKAKAIYLMRNPRDILVSGYFFWGNTNLVKNPG----SLGTYFEWFLQGNVLFGSWFEHVRGWL--SMREWDNFLVLYYEDMKKDTKGTIKKICDFLG 203          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: SUH2_RAT (Probable alcohol sulfotransferase OS=Rattus norvegicus PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.691e-12
Identity = 53/196 (27.04%), Postives = 91/196 (46.43%), Query Frame = 3
Query:  237 FKAKDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADE-PRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHF---LNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFG 812
            F  K+ D+++ + PKSGT W+  +   +I  K  P                    VP  +   +   +I   + I  E PR+  +H+P    +     +  K +Y+ RNP D  +S + F    N +++ G    SL   F+ +  G + FG ++EH+ G+   S++  +N L L Y+DMK+D    +KK+  F G
Sbjct:   30 FVVKEEDLLILTYPKSGTNWLNEI-VCLIQTKGDP---------------KWIQTVPIWDRSPWIETEIGYPAIINKEGPRLITSHLPIHLFSKSFFSSKAKAIYLMRNPRDILVSGYFFWGNTNLVKNPG----SLGTYFEWFLQGNVLFGSWFEHVRGWL--SMREWDNFLVLYYEDMKKDTKGTIKKICDFLG 203          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST2B1_MOUSE (Sulfotransferase family cytosolic 2B member 1 OS=Mus musculus GN=Sult2b1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.515e-12
Identity = 47/194 (24.23%), Postives = 92/194 (47.42%), Query Frame = 3
Query:  246 KDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHF---LNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFGVP 818
            +D DI + + PKSGT WM  +   I+            G    + +       P+ E  + A N +   S     PR+ ++H+P          +  K++Y+ RNP D  +S +++     +L+  G P+  L+   K    G + FG +++H+ G+    ++   N LF+ Y++++QD+  +++++  F G P
Sbjct:   56 RDDDIFIVTYPKSGTNWMIEIVCLILK----------DGDPSWIRSEPIWQRAPWCETIISAFNVLDRPS-----PRIMSSHLPIELFTKAFFSSKAKVIYVGRNPRDVVVSLYYYSKIAGQLKDPGTPDQFLQNFLK----GEVQFGSWFDHIKGWIR--MQNQENFLFITYEELQQDLRGSVQRICEFLGRP 228          
BLAST of FC873236 vs. ExPASy Swiss-Prot
Match: ST2B1_RAT (Sulfotransferase family cytosolic 2B member 1 OS=Rattus norvegicus GN=Sult2b1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.278e-11
Identity = 48/194 (24.74%), Postives = 91/194 (46.91%), Query Frame = 3
Query:  246 KDTDIILASIPKSGTTWMKALSFAIINRKNFPIISDHHGHHHPLLTSNPHDLVPFLEYKLYANNQIPELSQIADEPRVFATHIPFASLNLLPSMNNIKIVYICRNPFDTFISSWHFLN---KLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFFGVP 818
            +D DI + + PKSGT WM  +   I+            G    + +       P+ E  + A + +PE       PR+  +H+P          +  K++Y+ RNP D  +S +++     +L+  G PE  L+   K    G + FG +++H+ G+    ++   N LF+ Y++++QD+  +++ +  F G P
Sbjct:   56 RDDDIFIVTYPKSGTNWMIEIICLILK----------DGDPSWIRSEPIWQRAPWCETTISAFS-LPE----RPSPRLMCSHLPIELFTKAAFSSKAKVIYLGRNPRDVVVSLYYYSKIAVQLKDPGTPEQFLQNFLK----GEVQFGSWFDHIKGWIR--MRGRENFLFITYEELQQDLRGSVQLICEFLGRP 228          
The following BLAST results are available for this feature:
BLAST of FC873236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ST1B1_BOVIN3.755e-1428.43Sulfotransferase family cytosolic 1B member 1 OS=B... [more]
ST1A1_BOVIN3.755e-1427.08Sulfotransferase 1A1 OS=Bos taurus GN=SULT1A1 PE=1... [more]
SUHB_CAVPO4.905e-1427.183-beta-hydroxysteroid sulfotransferase OS=Cavia po... [more]
ST2A2_RAT1.427e-1327.08Alcohol sulfotransferase A OS=Rattus norvegicus GN... [more]
ST2A2_MOUSE1.208e-1227.18Bile salt sulfotransferase 2 OS=Mus musculus GN=Su... [more]
SUH2_RAT2.691e-1227.04Probable alcohol sulfotransferase OS=Rattus norveg... [more]
ST2B1_MOUSE3.515e-1224.23Sulfotransferase family cytosolic 2B member 1 OS=M... [more]
ST2B1_RAT2.278e-1124.74Sulfotransferase family cytosolic 2B member 1 OS=R... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DF04FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DF04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873236 ID=FC873236; Name=FC873236; organism=Citrus clementina; type=EST; length=835bp
CAACCAAAGATCTCTAAACAAGAAGAAACATGCCAAGCTCTACTATCACC
ACCATCACCCACTTCACAAGAACCCAAATAGCAGATGAAGAAGAAAAGCA
CTTAAGCAGTGAGTGCAAGGAAGTGCTTCTTTCACTTCCTAAAGAAAGAG
GTTGGCGAACGGCTTTTCTTTATAAGTTCCAGGGGTATTGGTGCCAGGCA
AAGGAGATTCAAGCCATAATGGCTTTCCAAAAGCACTTCAAAGCAAAAGA
CACTGATATCATTTTAGCCAGCATACCAAAATCAGGCACCACTTGGATGA
AAGCATTGTCTTTTGCAATAATCAATCGCAAGAATTTCCCCATAATTAGT
GATCATCATGGTCATCATCACCCCCTGCTTACTTCAAATCCTCATGATCT
TGTTCCTTTTCTTGAATACAAGCTCTATGCAAATAACCAAATTCCTGAGC
TTTCTCAAATTGCTGATGAGCCTAGAGTTTTTGCCACCCATATTCCATTT
GCTTCCTTAAATTTGCTTCCTTCAATGAACAACATTAAGATTGTTTATAT
TTGCAGAAACCCTTTTGATACTTTCATCTCTTCATGGCATTTTCTTAACA
AATTGAGGTCTCAAGGATTACCTGAAATTTCACTAGAGGAAGCATTCAAA
ATGTACTGTGATGGTGTCATTGGGTTCGGTCCATTTTGGGAGCATATGTT
AGGGTATTGGAATGAGAGCTTGAAGAGACCAAACAATGTCTTGTTTTTGA
AGTATGACGATATGAAACAAGACATTGTGTCAAATTTGAAGAAATTGGCA
AGCTTTTTTGGGGTTCCCTTTTTCTCCCTGAGGAA
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