FC873248

Overview
NameFC873248
Unique NameFC873248
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_SHESR (Anthranilate phosphoribosyltransferase OS=Shewanella sp. (strain MR-7) GN=trpD PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.076e-31
Identity = 71/213 (33.33%), Postives = 116/213 (54.46%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKV-NTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            D+L   G+ + + PE   RC++   + F+ +  YH  +K   PVR+ LK +T+FN+LGP++NPA   F ++GVY+  LV  +A  LQ  G +RA+VVH  GLDE++  G   + ++   +I  +   P D+G+P+  +  L+GG PA NA++ + +L G+                   C + +++  G ALA     SGKA   L+   +VS
Sbjct:  130 DLLAQFGIDLTMSPELASRCLESLNLCFLFAPHYHGGVKHAVPVRQALKTRTLFNVLGPLINPARPEFMLLGVYSPELVTPIARVLQALGTQRAMVVHGSGLDEVALHGSTQVAELKDGEIIEYQLTPADFGVPQAQISELEGGEPAQNAQITQSILQGQGSDAHTHAVAINAGCALYLCGLSDSVKAGTALALNTIKSGKAFELLNQLAKVS 342          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_METB6 (Anthranilate phosphoribosyltransferase OS=Methanoregula boonei (strain 6A8) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.405e-31
Identity = 80/215 (37.21%), Postives = 109/215 (50.70%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKGA 689
            DVL ALGV I +DP      V E GI F+ +  +HPAMK V   R+ L  +TVFN+LGP+ NPA     V+GVY++ L   MA  L   G+ RA+VV   GLDE++  G   + ++   +I  +   P  +G  R     L GG P  NA ++R +L G  G               V  +  TLAEG+  A E   SGKA   L   +  ++GA
Sbjct:  124 DVLTALGVDISVDPGRQAGIVQETGIIFLFAPSHHPAMKHVMATRQDLGCRTVFNLLGPLANPAGAAAQVLGVYDQKLTGPMAEVLSLLGVSRAMVVFGSGLDEITVTGETSVTELANSRITNYIVTPEQFGFTRAAPGDLLGGDPEKNARIIRAILDGAPGPARDIVLMNAGAAIYVGGRAATLAEGIRHAAESIDSGKAAGKLAALVTATRGA 338          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_IDILO (Anthranilate phosphoribosyltransferase OS=Idiomarina loihiensis GN=trpD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.405e-31
Identity = 64/159 (40.25%), Postives = 101/159 (63.52%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG 521
            DVLEAL + ++LDP      + + G  F+ +  YHP +K   PVR+ LK +T+FN++GP++NPA     ++GVY+E  V  MA  LQR G+KRA+VVH  GLDE++  GP  ++++   ++  +   P D+G+P   L+ L+GG   +NA +L  +L+G
Sbjct:  120 DVLEALKLRVNLDPSDASTQLADNGFCFLFAPHYHPGIKHAMPVRQTLKTRTLFNLIGPLVNPARPDAQLLGVYSEEWVRPMAETLQRLGVKRAMVVHGSGLDELALHGPTRVIELRNGELNDYHVTPNDFGVPSAPLDELKGGDADFNARILEDILAG 278          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_BEII9 (Anthranilate phosphoribosyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=trpD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.405e-31
Identity = 79/213 (37.09%), Postives = 112/213 (52.58%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            DVL ALGV   LD  GV  C+  AGIGFMM+  +H AM+ V   R +L  +T+FN+LGP+ NPA V   ++GV+++  +  +A  LQ  G K   VVH S+GLDE++  GP  +  +    I  F+  P   G+P+ TL  L+GG P  NA  LR  L G++                ++ K   L EGV +  +   SG A   L   + +S
Sbjct:  123 DVLSALGVRTGLDSAGVEACIRGAGIGFMMAQTHHTAMRHVASARVELGTRTIFNLLGPLCNPAGVTRQLLGVFSQAWLEPLAQVLQALGGKHVWVVHGSDGLDELTTTGPSFVTALEDGAIRSFTITPEMAGLPQATLADLKGGDPETNAAALREALGGKKSAYRDIALLNAAAALVIAAKAKDLKEGVLIGAKAVDSGAASAVLAKLVALS 335          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_XYLFA (Anthranilate phosphoribosyltransferase OS=Xylella fastidiosa GN=trpD PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.397e-31
Identity = 77/214 (35.98%), Postives = 122/214 (57.01%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVV-HSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 683
            DVLEALG  I+L P  V   +   G+GFM +  +HP M+ V PVR+++ V+T+FNILGP+ NPA  P  ++GV++ +LV   A+ L + G +RALVV   +G+DE+S     L+ ++   ++  +   P DYG+    + +LQ   PA + E+L  VL+G+ G               V+     +  GVALARE+   G+A + LD ++  ++
Sbjct:  126 DVLEALGASIELQPLEVAEVIGCIGVGFMFAPIHHPVMQVVSPVRREMGVRTIFNILGPLTNPADAPNILMGVFDPDLVGIQAHVLHKLGAERALVVCGRDGMDELSLGTTTLVGELRGGRVREYEVSPEDYGMAVSPISNLQVESPAESREMLLDVLAGQPGPALDVVALNAGAALYVAGVAQDIGHGVALAREVLFDGRARDILDRYVAFTR 339          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_PROMH (Anthranilate phosphoribosyltransferase OS=Proteus mirabilis (strain HI4320) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.397e-31
Identity = 61/160 (38.12%), Postives = 100/160 (62.50%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+L A G+ +D      R+ +DE G+ F+ +  YH   +F  PVR++L+ +T+FN+LGP++NPA  P A++GVY+  L++ +A+ L   G KRA VVHS G+DE+S   P  + ++   +I R+   P D+G+  C +  L+GG P  N ++L  +L G+
Sbjct:  121 DLLAAFGIPLDKSANDARQLLDEIGLCFLFAPLYHSGFRFAAPVRQQLRTRTLFNVLGPLINPARPPLALIGVYSPELLMPIADTLNVLGYKRAAVVHSGGMDEVSLHAPTQVAELHNGEITRYQLTPSDFGLRPCAISDLEGGTPEVNRQLLANLLQGQ 280          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_DEIGD (Anthranilate phosphoribosyltransferase OS=Deinococcus geothermalis (strain DSM 11300) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.397e-31
Identity = 80/206 (38.83%), Postives = 111/206 (53.88%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLS-GERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTL 659
            DVLEALGV +D  P+ V   V+E GIGFM +  YHPA++   PVR  L  +TVFNILGP+ NPA     VVGVY   L   +A  L+  G K A VV+  GLDE +  GP  +  +   ++   +  P + G+     E++ GG PA NAE+ R +L+ G                   + +V ++A+GVA ARE+  SG   + L
Sbjct:  134 DVLEALGVNLDAPPQLVADGVNELGIGFMFARNYHPALRHAAPVRADLAARTVFNILGPLANPAGASHLVVGVYRPELTRMLAEVLRLLGAKGATVVYGSGLDEFTVCGPNTVTGLRNGELICRTMHPEECGVSLHPKEAIVGGSPAENAEITRALLTGGGTPAQRDIVALNAGAALRTAEQVESIAQGVARAREVMASGAGWDLL 339          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_SORC5 (Anthranilate phosphoribosyltransferase OS=Sorangium cellulosum (strain So ce56) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.130e-31
Identity = 79/215 (36.74%), Postives = 115/215 (53.49%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG--XXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 683
            D LEALG  +D   E  RR +DE G  F+ + +YH  ++   PVR+ LKV+T+ N+LGP++NP+  P  V+G+Y+  LV   A  L   G + ALVVH  GLDE++   P     +    +E    DP D G+    +E+L+G GPA NA  LR +L+G RG                 ++ +   L EG ALA E   SG+A   L  ++ +S+
Sbjct:  122 DALEALGARLDPPAEVSRRALDEVGFCFLFAPQYHAGLRHAMPVRRALKVRTIMNLLGPLVNPSAPPIQVMGIYDPELVTHAARTLGMLGCQAALVVHGGGLDEVALHAPTRAARLRDGVVEELLIDPADAGVAPAPIEALRGAGPAANAAWLRDLLAG-RGAPAHRDAVAINAGALLWIAGRAEGLREGTALALEALGSGRAAERLTRFVALSR 335          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA6 (Anthranilate phosphoribosyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.130e-31
Identity = 59/160 (36.88%), Postives = 99/160 (61.88%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+  A G+ +D+ P   R C+D+A + F+ +  YH  +K   PVR  LK +T+FN+LGP++NP      ++GVY   LV+  A  LQ  G K+ALVVH  GLDE++  GP +++++  + +  ++  P D+G+    L +++GG P  N ++++ VL+GE
Sbjct:  122 DLFNAFGMKLDMSPAAARECLDKANLCFLFAPVYHAGIKHAMPVRTTLKTRTIFNLLGPLVNPMQPSHMMIGVYAPELVMPFARTLQLLGYKKALVVHGSGLDELAVHGPSMVVEIDGDALNEYTLSPSDFGLEEYPLAAIEGGVPDENKQLIQDVLAGE 281          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_DIAST (Anthranilate phosphoribosyltransferase OS=Diaphorobacter sp. (strain TPSY) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.130e-31
Identity = 79/207 (38.16%), Postives = 119/207 (57.49%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPG-LILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTL 659
            D +EALGV I+L P  + +C+ + GIGFM +  +HPAMK V PVRK+L V+T+FNILGP+ NPA  P  ++GV++E+LV     ALQR G + ALVV+  +GLDE+S LG G L+ ++    +  +   P D+G+      +L+   P  +  +L  VL G+ G                +   ++L +G+  A++   SG AL  L
Sbjct:  127 DAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHHPAMKNVAPVRKELGVRTIFNILGPLTNPAGAPNILMGVFHEDLVGIQVRALQRLGAEHALVVYGRDGLDEIS-LGAGTLVGELKDGAVREYEIHPEDFGLRMAGTRALRVENPTESKAMLMGVLQGDEGPARDIVCLNAGAALYAANVADSLEDGLRRAQQALASGAALAKL 332          
The following BLAST results are available for this feature:
BLAST of FC873248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_SHESR1.076e-3133.33Anthranilate phosphoribosyltransferase OS=Shewanel... [more]
TRPD_METB61.405e-3137.21Anthranilate phosphoribosyltransferase OS=Methanor... [more]
TRPD_IDILO1.405e-3140.25Anthranilate phosphoribosyltransferase OS=Idiomari... [more]
TRPD_BEII91.405e-3137.09Anthranilate phosphoribosyltransferase OS=Beijerin... [more]
TRPD_XYLFA2.397e-3135.98Anthranilate phosphoribosyltransferase OS=Xylella ... [more]
TRPD_PROMH2.397e-3138.13Anthranilate phosphoribosyltransferase OS=Proteus ... [more]
TRPD_DEIGD2.397e-3138.83Anthranilate phosphoribosyltransferase OS=Deinococ... [more]
TRPD_SORC53.130e-3136.74Anthranilate phosphoribosyltransferase OS=Sorangiu... [more]
TRPD_PSEA63.130e-3136.88Anthranilate phosphoribosyltransferase OS=Pseudoal... [more]
TRPD_DIAST3.130e-3138.16Anthranilate phosphoribosyltransferase OS=Diaphoro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG06FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873248 ID=FC873248; Name=FC873248; organism=Citrus clementina; type=EST; length=797bp
CTCAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACC
CTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACT
GTATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGC
TGTGGTTGGTGTTTACAATGAAAACTTGGTACTCAAAATGGCCAATGCAC
TGCAACGATTTGGCCTGAAAAGAGCATTGGTTGTTCACTCAGAGGGTTTG
GATGAGATGAGTCCCCTTGGACCTGGTCTGATCCTTGATGTCACCCAAGA
AAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGGCATTCCTCGCT
GCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATAATGCAGAGGTC
TTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCTGATGCATTAAT
CCTAAATGCTGCAGCAGCACTCTTGGTCAGTTGCAAAGTGAACACCTTGG
CTGAGGGTGTAGCCCTGGCGCGTGAAATTCAATTATCAGGGAAAGCTCTT
AATACGCTGGATTTATGGATAGAAGTCTCAAAGGGGGCGCCAGCATTTGC
TTGTGCATGAGTAATGGAGTTTTGAAGACTAAGAAAGACTTCATTGCAGT
ACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTATGCACGTCT
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