FC873248

Overview
NameFC873248
Unique NameFC873248
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_VESOH (Anthranilate phosphoribosyltransferase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.340e-31
Identity = 73/215 (33.95%), Postives = 125/215 (58.14%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKG 686
            DVL+A GV +++  E + +C+++ GIGFM +  +H ++K+   VRK L +KT+FNI+GP+ NPA VP  ++GVY +NLV  +A+ L++ G K  +VVHS +GLDE+S      + ++   KI+ ++ +P ++G+P   L+ ++      +  ++++ L G+                 V    N+L EGV+ A +I  SG A   LD ++  S G
Sbjct:  124 DVLKAAGVNLNMSVERISKCIEKIGIGFMFAPFHHHSIKYTTNVRKDLAIKTIFNIVGPLTNPAKVPNQIIGVYTQNLVEPIAHVLKKLGSKHIIVVHSKDGLDEISIADDTFVAELKNGKIKTYTINPTNFGLPLGNLDDIKVNNADDSLILIQQALDGKDSVAKNIVALNSGAAIYVCELANSLQEGVSKALKILNSGVAHQKLDDFVRESTG 338          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_SALAI (Anthranilate phosphoribosyltransferase OS=Salinispora arenicola (strain CNS-205) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.340e-31
Identity = 79/217 (36.41%), Postives = 109/217 (50.23%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVN-----TLAEGVALAREIQLSGKALNTLDLWIEVS 680
            DVLE LG+ +DL PEGV  CV EAGIGF  + ++HP M+   PVR++L V T FN LGP+ NPA      VG ++  +   MA      G    ++   +GLDE +   P  +       +     D  D G+PR TL  L+GG  A NA+ +RR+L+GE G                   ++      L  G++ A E   SG A  TL+ WIEV+
Sbjct:  129 DVLEFLGLPLDLGPEGVAACVAEAGIGFCFAARFHPGMRHAGPVRRELGVPTAFNFLGPLTNPARPRAGAVGCFDARMAPVMAAVFAARGDSTLVLRGEDGLDEFTTAAPTRVWAAQNGTVREALLDAADLGVPRATLADLRGGDVACNADAVRRLLAGETGPIRDAVLVNAAAALATQAPLDGDLTEALRTGLSRAAESIDSGAAARTLNRWIEVA 345          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_OCHA4 (Anthranilate phosphoribosyltransferase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.340e-31
Identity = 78/217 (35.94%), Postives = 114/217 (52.53%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKGAPA 695
            D L ALG+ I+ D   + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGV+    ++ +A  L+  G + A VV+ +GLDEM+  G   +  +   +I  F   P + G+ RC    L+GG  A NA+ L  VL GE+                ++     L EG+ALA +   SG AL+ L   I VS    A
Sbjct:  123 DALAALGINIEADASIIGRSITEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGPLSNPASVKRQLVGVFAPQWLVPLAEVLKELGSEAAWVVYGDGLDEMTTAGTTQVAALENGRIRTFEITPEEVGLRRCDPAELKGGEAAVNAKALLGVLEGEKNAYRDIVLLNSGAALVIAGNAKDLKEGIALAAQSIDSGAALDVLQKVIAVSNDKAA 339          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_EXIS2 (Anthranilate phosphoribosyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.340e-31
Identity = 73/206 (35.44%), Postives = 118/206 (57.28%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTL 659
            DVLE+LGV +D+  E +   ++  GI F+ + + HP +K +  VR+ L++ T+FN++GP+ NP  +   ++G+Y E+L+  +A  L R G KRA+V+H   G+DE S  G   ++ + Q ++ RFS  P + G+    +E+++GG  A NAE+L RVL GE G                  +V T+ EG+  + E   SG+AL  L
Sbjct:  121 DVLESLGVPLDVSTEEIATLLETNGIAFLFAQRMHPRVKQIMKVRRDLRIPTIFNLIGPLTNPVPLKTQLLGIYREDLLETIALTLHRLGRKRAIVLHGACGMDEASLAGTNQLVLLDQGELIRFSLHPEEVGLSVAPIEAIRGGTAAENAEILLRVLRGEAGPYRDTVLLNAGIALFAEGRVETIREGIERSAESIDSGRALEKL 326          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_ALHEH (Anthranilate phosphoribosyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.340e-31
Identity = 73/214 (34.11%), Postives = 119/214 (55.61%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 683
            DVLEA G  +DL+ + V  C+   G+GF+ + ++H AMK     R+++ V+T+FNILGP+ NPA  P  ++GVYN++ V+ +A  L+  G +R LVVH+ +GLDE+S     L+ ++ + +I  +   P  +G+PR  L  LQ G    +  ++R   +G  G                + K  TL  GVA A E+  +G AL  L+ ++  ++
Sbjct:  123 DVLEAAGARLDLNADQVAECIRRVGVGFLFAPQHHSAMKHAIGPRREMGVRTLFNILGPLTNPAGAPHQLLGVYNKHWVVPVAETLRALGSRRVLVVHADDGLDEISIGSDTLVAELNEGEIHEYRITPEQFGLPRAELSDLQVGTAEESLALIREAFAGWEGPAFNIIAINAGAALYAAEKAPTLDAGVAGAAELLRNGSALRKLEAFVRCTR 336          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK5 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.974e-31
Identity = 73/202 (36.14%), Postives = 111/202 (54.95%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKA 647
            DVL+ LG+ I+L+   V  C+D  G+GF+ +  YH AMK V  +R+ L V+T+FNILGP+ NPA V   V+GVY+  L+   A  L   G +RA+VVH  +GLDE++      + +V   +I +++  P D+GI     +++ GG    NA ++  +L G+ G               +  K   L EG+  A E+  SGKA
Sbjct:  122 DVLKELGININLEKSKVEHCIDNVGMGFLFAPSYHSAMKNVAGIRRDLGVRTIFNILGPLTNPAFVKGQVMGVYDRKLLEPAAKTLLNLGCERAMVVHGGDGLDEITTTTVTYVCEVKDGEIRKYTLSPGDFGIKTTFYKNIAGGTARENAAIIMDILKGKTGPERDIVVLNSAAAIYIGKKAEDLKEGILRANELIDSGKA 323          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK1 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.974e-31
Identity = 73/202 (36.14%), Postives = 111/202 (54.95%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKA 647
            DVL+ LG+ I+L+   V  C+D  G+GF+ +  YH AMK V  +R+ L V+T+FNILGP+ NPA V   V+GVY+  L+   A  L   G +RA+VVH  +GLDE++      + +V   +I +++  P D+GI     +++ GG    NA ++  +L G+ G               +  K   L EG+  A E+  SGKA
Sbjct:  122 DVLKELGININLEKSKVEHCIDNVGMGFLFAPSYHSAMKNVAGIRRDLGVRTIFNILGPLTNPAFVKGQVMGVYDRKLLEPAAKTLLNLGCERAMVVHGGDGLDEITTTTVTYVCEVKDGEIRKYTLSPGDFGIKTTFYKNIAGGTARENAAIIMDILKGKTGPERDIVVLNSAAAIYIGKKAEDLKEGILRANELIDSGKA 323          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_SERP5 (Anthranilate phosphoribosyltransferase OS=Serratia proteamaculans (strain 568) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.108e-31
Identity = 63/160 (39.38%), Postives = 100/160 (62.50%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+L A G+ +DL  E  R+ +DE G+ F+ + +YH   +   PVR++LK +TVFN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVH  G+DE++      + ++   +IE +   P  +G+    LE+L GG P  N ++L R+L G+
Sbjct:  121 DLLAAFGIRLDLPAEEARKALDELGVCFLFAPQYHTGFRHAMPVRQQLKTRTVFNVLGPLINPARPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHGGGMDEVAIHATTHVAELNNGEIESYQLTPQSFGLQSYPLEALLGGSPEENRDILARLLQGK 280          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_SALTO (Anthranilate phosphoribosyltransferase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.108e-31
Identity = 79/218 (36.24%), Postives = 109/218 (50.00%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVN-----TLAEGVALAREIQLSGKALNTLDLWIEVSK 683
            DVLE LG+ +DL PE V  CV EAGIGF  + ++HP M+   PVR++L V T FN LGP+ NPA      VG ++  +   MA      G    ++   +GLDE +   P  +       +     D  D GIPR TL  L+GG  AYNAE +RR+L+GE G                   ++      L  G+  A +   SG A  TL+ WI+V++
Sbjct:  129 DVLEFLGLPLDLGPEAVATCVAEAGIGFCFAARFHPGMRHAGPVRRELGVPTAFNFLGPLTNPARPRAGAVGCFDARMAPVMAAVFAARGDSALVLRGEDGLDEFTTAAPTRVWAAQDGTVREALLDATDLGIPRATLADLRGGDVAYNAEAVRRLLAGETGPVRDAVLVNAAAALATQGPLDADLTEALQAGLLRAADSIDSGAAARTLERWIDVAQ 346          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_ERWT9 (Anthranilate phosphoribosyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.108e-31
Identity = 63/160 (39.38%), Postives = 99/160 (61.88%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+L A G+ +DL  E  R+ +DE  + F+ + +YH   +   PVRK+LK +T+FN+LGP++NPA  P AV+GVY+  LVL +A  L+  G +RA VVH  G+DE++      + ++   +I R+   P D+G+     E+L GG P  N ++L R+L G+
Sbjct:  121 DLLAAFGISLDLPAEQARQALDELNVCFLFAPQYHSGFRHAMPVRKELKTRTIFNVLGPLINPARPPLAVIGVYSPQLVLPIAETLKMLGYQRAAVVHGGGMDEVALHSATQVAELRDGEITRYQLTPDDFGLSSHPQEALAGGSPEENRDILTRLLQGK 280          
The following BLAST results are available for this feature:
BLAST of FC873248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_VESOH5.340e-3133.95Anthranilate phosphoribosyltransferase OS=Vesicomy... [more]
TRPD_SALAI5.340e-3136.41Anthranilate phosphoribosyltransferase OS=Salinisp... [more]
TRPD_OCHA45.340e-3135.94Anthranilate phosphoribosyltransferase OS=Ochrobac... [more]
TRPD_EXIS25.340e-3135.44Anthranilate phosphoribosyltransferase OS=Exiguoba... [more]
TRPD_ALHEH5.340e-3134.11Anthranilate phosphoribosyltransferase OS=Alkalili... [more]
TRPD_CLOK56.974e-3136.14Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_CLOK16.974e-3136.14Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_SERP59.108e-3139.38Anthranilate phosphoribosyltransferase OS=Serratia... [more]
TRPD_SALTO9.108e-3136.24Anthranilate phosphoribosyltransferase OS=Salinisp... [more]
TRPD_ERWT99.108e-3139.38Anthranilate phosphoribosyltransferase OS=Erwinia ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG06FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873248 ID=FC873248; Name=FC873248; organism=Citrus clementina; type=EST; length=797bp
CTCAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACC
CTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACT
GTATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGC
TGTGGTTGGTGTTTACAATGAAAACTTGGTACTCAAAATGGCCAATGCAC
TGCAACGATTTGGCCTGAAAAGAGCATTGGTTGTTCACTCAGAGGGTTTG
GATGAGATGAGTCCCCTTGGACCTGGTCTGATCCTTGATGTCACCCAAGA
AAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGGCATTCCTCGCT
GCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATAATGCAGAGGTC
TTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCTGATGCATTAAT
CCTAAATGCTGCAGCAGCACTCTTGGTCAGTTGCAAAGTGAACACCTTGG
CTGAGGGTGTAGCCCTGGCGCGTGAAATTCAATTATCAGGGAAAGCTCTT
AATACGCTGGATTTATGGATAGAAGTCTCAAAGGGGGCGCCAGCATTTGC
TTGTGCATGAGTAATGGAGTTTTGAAGACTAAGAAAGACTTCATTGCAGT
ACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTATGCACGTCT
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