FC873248

Overview
NameFC873248
Unique NameFC873248
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_BACC4 (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain B4264) GN=trpD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.554e-30
Identity = 76/213 (35.68%), Postives = 113/213 (53.05%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            D+LE LGV I   P  +   ++  GI F+ +   HPA++ +  +RK+L V T+FN++GP+ NP  +    VG+Y  +++L +A  LQ+ G K+ALVV+  G LDE S  G   ++ +   +I   S DP  YG  R   E ++GG    NA++   VLSGE+                 + K  T+ EG+ LA     SGKAL  L+L I  S
Sbjct:  121 DLLEELGVNISSTPNEIDYLLEHVGIAFLFAPVMHPALRRIMKIRKELNVPTIFNLIGPLTNPVNLETQFVGIYKRDMLLPVAEVLQKLGRKQALVVNGSGFLDEASLQGENHVVLLKDNEIVEMSIDPEKYGFSRVKNEEIRGGNSKENAKITLEVLSGEKSVYRDTVLLNAGLALFANGKTETIEEGIKLAAHSIDSGKALTKLNLLIAAS 333          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_SHESW (Anthranilate phosphoribosyltransferase OS=Shewanella sp. (strain W3-18-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.029e-30
Identity = 72/213 (33.80%), Postives = 110/213 (51.64%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKV-NTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            D+L   G+ + + P+   RC+D   + F+ +  YH  +K   PVR+ LK +T+FN+LGP++NPA   F ++GVY+  LVL +A  L+  G KRA+VVH  GLDE++  G  L+ ++    I  +   P D G+P   +  L+GG PA NA +   +L G                    C + +++  G  LA     SGKA   L    +VS
Sbjct:  131 DLLAQFGIDLTMSPDTASRCLDALNLCFLFAPHYHGGVKHAGPVRQALKTRTLFNVLGPLINPARPEFMLLGVYSPELVLPIAKVLKALGTKRAMVVHGSGLDEVALHGNTLVAELKDGDIIEYQLTPADLGVPLAQISDLEGGEPAQNALITEAILRGRGTDAHANAVAINAGCALYVCGIADSVKAGTLLALSTIQSGKAFELLSQLAKVS 343          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_BRUME (Anthranilate phosphoribosyltransferase OS=Brucella melitensis GN=trpD PE=3 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.029e-30
Identity = 78/217 (35.94%), Postives = 115/217 (53.00%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKGAPA 695
            D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGV+    +  +A+ L+  G + A VV+ +GLDEM+  G   +  +   +I  F   P + G+ RC+   L+GG  A NA+ L  VL G+                 V+ K   L +G+A A +   SG AL  L   I VS   PA
Sbjct:  123 DALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGPLSNPASVKRQLVGVFAPQWLEPLAHVLKELGSETAWVVYGDGLDEMTTAGTTQVAALENGQIRTFEITPEEVGLRRCSPAELKGGEAAENAKALLGVLEGKDSAYRDIVLLNSGAALVVAGKAENLKDGIAQAVQSIDSGAALAVLQKVIAVSNDKPA 339          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_BRUMB (Anthranilate phosphoribosyltransferase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=trpD PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.029e-30
Identity = 78/217 (35.94%), Postives = 115/217 (53.00%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKGAPA 695
            D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGV+    +  +A+ L+  G + A VV+ +GLDEM+  G   +  +   +I  F   P + G+ RC+   L+GG  A NA+ L  VL G+                 V+ K   L +G+A A +   SG AL  L   I VS   PA
Sbjct:  123 DALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGPLSNPASVKRQLVGVFAPQWLEPLAHVLKELGSETAWVVYGDGLDEMTTAGTTQVAALENGQIRTFEITPEEVGLRRCSPAELKGGEAAENAKALLGVLEGKDSAYRDIVLLNSGAALVVAGKAENLKDGIAQAVQSIDSGAALAVLQKVIAVSNDKPA 339          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_BRUC2 (Anthranilate phosphoribosyltransferase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=trpD PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.029e-30
Identity = 78/217 (35.94%), Postives = 115/217 (53.00%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKGAPA 695
            D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGV+    +  +A+ L+  G + A VV+ +GLDEM+  G   +  +   +I  F   P + G+ RC+   L+GG  A NA+ L  VL G+                 V+ K   L +G+A A +   SG AL  L   I VS   PA
Sbjct:  123 DALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGPLSNPASVKRQLVGVFAPQWLEPLAHVLKELGSETAWVVYGDGLDEMTTAGTTQVAALENGQIRTFEITPEEVGLRRCSPAELKGGEAAENAKALLGVLEGKDSAYRDIVLLNSGAALVVAGKAENLKDGIAQAVQSIDSGAALAVLQKVIAVSNDKPA 339          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_BRUAB (Anthranilate phosphoribosyltransferase OS=Brucella abortus GN=trpD PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.029e-30
Identity = 78/217 (35.94%), Postives = 115/217 (53.00%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKGAPA 695
            D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGV+    +  +A+ L+  G + A VV+ +GLDEM+  G   +  +   +I  F   P + G+ RC+   L+GG  A NA+ L  VL G+                 V+ K   L +G+A A +   SG AL  L   I VS   PA
Sbjct:  123 DALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGPLSNPASVKRQLVGVFAPQWLEPLAHVLKELGSETAWVVYGDGLDEMTTAGTTQVAALENGQIRTFEITPEEVGLRRCSPAELKGGEAAENAKALLGVLEGKDSAYRDIVLLNSGAALVVAGKAENLKDGIAQAVQSIDSGAALAVLQKVIAVSNDKPA 339          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_BRUA2 (Anthranilate phosphoribosyltransferase OS=Brucella abortus (strain 2308) GN=trpD PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.029e-30
Identity = 78/217 (35.94%), Postives = 115/217 (53.00%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKGAPA 695
            D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGV+    +  +A+ L+  G + A VV+ +GLDEM+  G   +  +   +I  F   P + G+ RC+   L+GG  A NA+ L  VL G+                 V+ K   L +G+A A +   SG AL  L   I VS   PA
Sbjct:  123 DALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGPLSNPASVKRQLVGVFAPQWLEPLAHVLKELGSETAWVVYGDGLDEMTTAGTTQVAALENGQIRTFEITPEEVGLRRCSPAELKGGEAAENAKALLGVLEGKDSAYRDIVLLNSGAALVVAGKAENLKDGIAQAVQSIDSGAALAVLQKVIAVSNDKPA 339          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_BRUA1 (Anthranilate phosphoribosyltransferase OS=Brucella abortus (strain S19) GN=trpD PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.029e-30
Identity = 78/217 (35.94%), Postives = 115/217 (53.00%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKGAPA 695
            D L ALG+ I+ D + + R + EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGV+    +  +A+ L+  G + A VV+ +GLDEM+  G   +  +   +I  F   P + G+ RC+   L+GG  A NA+ L  VL G+                 V+ K   L +G+A A +   SG AL  L   I VS   PA
Sbjct:  123 DALAALGINIEADADTIGRSISEAGLGFMFAPMHHSAMRHVGPSRVELGTRTIFNLLGPLSNPASVKRQLVGVFAPQWLEPLAHVLKELGSETAWVVYGDGLDEMTTAGTTQVAALENGQIRTFEITPEEVGLRRCSPAELKGGEAAENAKALLGVLEGKDSAYRDIVLLNSGAALVVAGKAENLKDGIAQAVQSIDSGAALAVLQKVIAVSNDKPA 339          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPG_ECOLI (Anthranilate synthase component II OS=Escherichia coli (strain K12) GN=trpD PE=1 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 2.650e-30
Identity = 62/160 (38.75%), Postives = 102/160 (63.75%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+L A G+ +D++ +  R+ +DE G+ F+ + KYH   +   PVR++LK +T+FN+LGP++NPA  P A++GVY+  LVL +A  L+  G +RA VVHS G+DE+S   P ++ ++   +I+ +     D+G+     E L GG P  N ++L R+L G+
Sbjct:  320 DLLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQEQLAGGTPEENRDILTRLLQGK 479          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_POLSJ (Anthranilate phosphoribosyltransferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=trpD PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.650e-30
Identity = 73/214 (34.11%), Postives = 121/214 (56.54%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 683
            DV+EALG+ I+L PE + +C++EAG+GFM +  +HPAMK V P+RK+L V+T+FNILGP+ NPA  P  ++GV++ +LV     ALQR G + ALVV+  +G+DE+S     ++ ++   +I  +   P D+ +   +  +L+   P  +  +L  VL  + G                +   +++ EG+  AR    SG A   L   + +++
Sbjct:  130 DVMEALGININLMPEAIAKCIEEAGVGFMFAPNHHPAMKNVAPIRKELGVRTIFNILGPLTNPASAPNILMGVFHPDLVGIQIRALQRLGAEHALVVYGKDGMDEVSLGAATIVGELKNGEITEYEIHPEDFSMTMASNRALRVETPEQSKAMLLGVLDNQPGAARDIVILNAGAALYAANVASSMQEGIVKARAALESGAAKARLAQLVSITQ 343          
The following BLAST results are available for this feature:
BLAST of FC873248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_BACC41.554e-3035.68Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_SHESW2.029e-3033.80Anthranilate phosphoribosyltransferase OS=Shewanel... [more]
TRPD_BRUME2.029e-3035.94Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_BRUMB2.029e-3035.94Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_BRUC22.029e-3035.94Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_BRUAB2.029e-3035.94Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_BRUA22.029e-3035.94Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPD_BRUA12.029e-3035.94Anthranilate phosphoribosyltransferase OS=Brucella... [more]
TRPG_ECOLI2.650e-3038.75Anthranilate synthase component II OS=Escherichia ... [more]
TRPD_POLSJ2.650e-3034.11Anthranilate phosphoribosyltransferase OS=Polaromo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG06FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873248 ID=FC873248; Name=FC873248; organism=Citrus clementina; type=EST; length=797bp
CTCAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACC
CTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACT
GTATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGC
TGTGGTTGGTGTTTACAATGAAAACTTGGTACTCAAAATGGCCAATGCAC
TGCAACGATTTGGCCTGAAAAGAGCATTGGTTGTTCACTCAGAGGGTTTG
GATGAGATGAGTCCCCTTGGACCTGGTCTGATCCTTGATGTCACCCAAGA
AAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGGCATTCCTCGCT
GCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATAATGCAGAGGTC
TTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCTGATGCATTAAT
CCTAAATGCTGCAGCAGCACTCTTGGTCAGTTGCAAAGTGAACACCTTGG
CTGAGGGTGTAGCCCTGGCGCGTGAAATTCAATTATCAGGGAAAGCTCTT
AATACGCTGGATTTATGGATAGAAGTCTCAAAGGGGGCGCCAGCATTTGC
TTGTGCATGAGTAATGGAGTTTTGAAGACTAAGAAAGACTTCATTGCAGT
ACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTATGCACGTCT
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