FC873248

Overview
NameFC873248
Unique NameFC873248
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:524..1320. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_RHISN (Anthranilate phosphoribosyltransferase OS=Rhizobium sp. (strain NGR234) GN=trpD PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.111e-36
Identity = 83/215 (38.60%), Postives = 119/215 (55.35%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKGA 689
            D L  LGV +D+ PE + RC+ EAG+GFM + ++H AM+ V P R +L  +T+FN+LGP+ NPA V   +VGV+    V  +A  L+  G +   VVH EGLDE++  G   + ++   KI  F   P  +G+ R TL++L+GG  A+NA  L+ VL GE                 ++ +   LAEG+A+ RE   SG A   L   I VS  A
Sbjct:  123 DALSCLGVKLDIGPEAIARCIREAGVGFMFAQQHHSAMRHVGPTRVELGTRTIFNLLGPLSNPAGVKRQLVGVFAPQWVDPLAEVLRDLGSESIWVVHGEGLDEITTTGVTKVAELKDGKIRSFELTPESFGLARTTLDALKGGDGAHNAAALQAVLDGEENAYRDISLANAAASLMIAGRATDLAEGMAIGREALSSGAAKAALQRLITVSNAA 337          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_EUBR3 (Anthranilate phosphoribosyltransferase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=trpD PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.111e-36
Identity = 86/213 (40.38%), Postives = 122/213 (57.28%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            D LEALGV ID  PE     +++ G+ F  + KYH +MK+V P+RK+L  +TVFNILGP+ NP      ++GVY+E LV  +A  L   G+KR +VV+  + LDE+S      I ++           P D+G  RCT E L+GG P  NA+++R +L G++G               +  K +++ EG+ LA EI  SGKAL TLD  I+VS
Sbjct:  124 DCLEALGVNIDQSPEKCVELLNKVGMCFFFAQKYHTSMKYVGPIRKELGFRTVFNILGPLTNPGSPAMQLLGVYDEYLVEPLAQVLVSLGVKRGMVVYGMDKLDEISMSASTKICEIKDGWFRTTVISPEDFGFERCTKEDLKGGTPEENAKIVRDILGGQKGHKRNAVLMNAGASLYIGGKADSMKEGIELAAEIIDSGKALETLDKLIDVS 336          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_THERP (Anthranilate phosphoribosyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=trpD PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.451e-36
Identity = 87/210 (41.43%), Postives = 126/210 (60.00%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQE---KIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 662
            DVLEALGV IDL+P  V RCV+EAGIGFM + ++HPA++   PVR++L  +TVFN+LGP+ NPA V + ++GV    LV  +A  L    ++ ALVVHS +GLDE+S   P  + +V +    ++ R++ +P   G+ R   ++L+GG    NA ++R VL G RG                +    +LAEG+ LAR    SG AL+ L+
Sbjct:  123 DVLEALGVRIDLNPSAVARCVEEAGIGFMFAQRFHPALRHAAPVRRELGFRTVFNVLGPLANPARVRYQLLGVAMPELVETVARVLALLDVEHALVVHSADGLDEISLGAPTTVYEVRRNGTVEVRRWTLEPESLGLERVPSDALRGGTAEENARIVRAVLEGARGPARDVVLLNAAAALVAADAAQSLAEGLELARHAIDSGAALDRLE 332          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_ACIBL (Anthranilate phosphoribosyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=trpD PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.451e-36
Identity = 83/211 (39.34%), Postives = 122/211 (57.82%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIE 674
            DV+EALGV I+L  E +  C+++ GI F+ +   H AMK+V+P R++LK++TVFN+LGP+ NPA     VVGVY   LV K+A AL + GLKRALVVH  +GLDE++  GP  + +V   K+  +   P  +G+ R  L +L+GG    NA ++R +L GER                 + +  T+   + +A     SG+A   L L +E
Sbjct:  133 DVVEALGVNINLPAERMAECLEKVGIAFLFAPAMHTAMKYVQPARRELKMRTVFNLLGPLTNPANASCQVVGVYTGQLVEKLAQALLQLGLKRALVVHGWDGLDEITISGPTKVAEVRDGKVTSYEISPEQFGLQRAPLSALEGGDAQVNAAIIRAILDGERSPKRDVVLLNAAAALVAAGQAETMGAAIPVAAYAIDSGQAKGRLRLLVE 343          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_XANP2 (Anthranilate phosphoribosyltransferase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=trpD PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.895e-36
Identity = 87/214 (40.65%), Postives = 125/214 (58.41%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 683
            DVL ALGV IDLDP G+ RC+ EAGIGFM +  +HPAMK V P R ++  +T+FN+LGP+ NPA V   +VGV+ ++ ++ +A  L+  G ++A VVH S+GLDE++  G   I  + + +I  F+  P D G+ R   E L+GG   +NA+ LR VL G  G               V+ +   L EGV +AR    +G A   L+  + VS+
Sbjct:  123 DVLAALGVRIDLDPAGISRCIAEAGIGFMFAPSHHPAMKHVGPTRVEMGTRTIFNLLGPLSNPAGVTRQMVGVFAKSWIVPLAEVLRTLGSQKAFVVHGSDGLDEITISGGTDIAVLDEGRIHTFTIMPEDVGLKRHPAEDLKGGDAVHNAKALRTVLDGAEGAYRDVSLFNAAAALVVAGRAKDLKEGVEMARVSLDTGSARARLEHLVAVSE 336          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_ROSS1 (Anthranilate phosphoribosyltransferase OS=Roseiflexus sp. (strain RS-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.475e-36
Identity = 91/217 (41.94%), Postives = 125/217 (57.60%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDV-TQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSC-KVNTLAEGVALAREIQLSGKALNTLDLWIEVSKG 686
            DVLE LGV I+LD   V RC+D+AGIGFM + K+HPAM+FV PVR+++ ++TVFNILGP+ NPA     V+GV +  L  KMA AL   G + ALV+H   GLDE++  GP L++DV       R+     D G+     E+L+GG  + N  ++R +LSGE                 V+  +   L +G+  AR    SG AL  L+  I VS+G
Sbjct:  122 DVLEGLGVNIELDAASVARCLDQAGIGFMFAQKFHPAMRFVGPVRREIGIRTVFNILGPLSNPAHARHQVLGVADPALAEKMARALHLLGTQHALVIHGHGGLDELTLSGPNLVIDVRAGHTPRRYEVTAADLGLAPAPREALRGGDVSVNVAIVRGILSGEDQSARRDVALLNAAAALVAADRAADLRDGLHQARHSLESGAALARLERLITVSRG 338          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_PSEHT (Anthranilate phosphoribosyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=trpD PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.475e-36
Identity = 78/215 (36.28%), Postives = 121/215 (56.28%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG-XXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKG 686
            D+L+ALG+ I++ P     C+++ G  F+ + +YHP ++    VR  LK +T+FNILGP++NPA     ++GVYN NL L MA  L+  G KRA++VH  G DE++  GP  ++++    I  ++ +P D+ +   +LE L G GP YNA V   +L G+                  +S K  +L +G      +  SG+A+NTL+  IEVS G
Sbjct:  141 DLLKALGINIEMTPAQAANCLEQTGFTFLFAPQYHPGVRHAMGVRTALKTRTIFNILGPLVNPAAPEVQLLGVYNPNLCLPMAQTLRTLGTKRAMIVHGSGTDEIALHGPTTVVELNNGNISEYTLNPSDFDLANYSLEQLTGEGPQYNANVSLAILQGKGDEAHNAAIIVNVAALLYLSGKAQSLKDGAHKVHTLLSSGQAMNTLNAIIEVSNG 355          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_GEOUR (Anthranilate phosphoribosyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=trpD PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.475e-36
Identity = 84/213 (39.44%), Postives = 126/213 (59.15%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            DVLE+LGV +D+  E + RC++E GIGF+ +   H AMK+    RK++ ++T+FNILGP+ NPA     V+GVY E+LV K+A+ L+  G KR  VVH  +G+DEM+      I +VT   +    F P + G+ RC ++ L+GG  A NA ++RRVL GE+G                + +V   A G+ +A E   SGKAL  L+  ++++
Sbjct:  136 DVLESLGVNLDVTQETIERCINEIGIGFLFAPALHGAMKYAIGPRKEIGIRTIFNILGPLTNPAGAGCQVLGVYREDLVEKLAHVLKNLGCKRGFVVHGQDGMDEMTLTAETRIAEVTPAGVATRLFRPEELGLSRCGMDDLRGGDAAANAVIVRRVLEGEKGPKRDIVLLNAAFGLVAAGRVVDPAAGLTMAAEAIDSGKALAQLEKLVKLT 348          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP2 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=trpD PE=3 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 3.232e-36
Identity = 91/216 (42.13%), Postives = 119/216 (55.09%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKGA 689
            DVL ALGV ID+ P+ V RCV EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   ++GV++   V  +A  LQ  G +   VVH S+GLDE++  GP  + ++   +I  F   P D G+PR   ++L+GG    NA  LR VL G  G               V+ K   L EGVAL  +   SG A   L   I VS  A
Sbjct:  123 DVLNALGVKIDITPDHVGRCVAEAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVKRQMIGVFSRQWVQPLAQVLQNLGSESIWVVHGSDGLDEITLSGPTAVAELKNGEIRTFEIGPEDAGLPRAPADALKGGDAEANAVALRAVLEGMPGPYRDVALLNAAATLIVAGKAKDLKEGVALGAQSIDSGAAEARLKKLIAVSAAA 338          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_NATPD (Anthranilate phosphoribosyltransferase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=trpD PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.232e-36
Identity = 82/202 (40.59%), Postives = 119/202 (58.91%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE-RGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKA 647
            DVLE +GV ID +P  V  C++E G+GFM++  +HPAMK V   RK+L ++T+FN+LGP+ NPA     VVGVY+E LV  +A+AL R  + RALVVH  GLDE+   G   + +V  E +E+++  P D G+    L ++ GG P  NA  +R +L G+  G               ++ + ++LA GV  ARE   +G A
Sbjct:  120 DVLEEIGVTIDAEPPAVETCIEETGMGFMLAPVFHPAMKAVIGPRKELGMRTIFNVLGPLTNPADADAQVVGVYDEALVPTLADALSRMSVDRALVVHGAGLDEIGVHGESTVAEVDGESVEQYTVTPSDLGVDSHDLSAVAGGSPTENAADMRGILEGDVEGAKRDIILANAGAAIYIAGEADSLAAGVDAARESIDTGAA 321          
The following BLAST results are available for this feature:
BLAST of FC873248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_RHISN1.111e-3638.60Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_EUBR31.111e-3640.38Anthranilate phosphoribosyltransferase OS=Eubacter... [more]
TRPD_THERP1.451e-3641.43Anthranilate phosphoribosyltransferase OS=Thermomi... [more]
TRPD_ACIBL1.451e-3639.34Anthranilate phosphoribosyltransferase OS=Acidobac... [more]
TRPD_XANP21.895e-3640.65Anthranilate phosphoribosyltransferase OS=Xanthoba... [more]
TRPD_ROSS12.475e-3641.94Anthranilate phosphoribosyltransferase OS=Roseifle... [more]
TRPD_PSEHT2.475e-3636.28Anthranilate phosphoribosyltransferase OS=Pseudoal... [more]
TRPD_GEOUR2.475e-3639.44Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_RHOP23.232e-3642.13Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_NATPD3.232e-3640.59Anthranilate phosphoribosyltransferase OS=Natronom... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG06FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873248 ID=FC873248; Name=FC873248; organism=Citrus clementina; type=EST; length=797bp
CTCAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACC
CTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACT
GTATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGC
TGTGGTTGGTGTTTACAATGAAAACTTGGTACTCAAAATGGCCAATGCAC
TGCAACGATTTGGCCTGAAAAGAGCATTGGTTGTTCACTCAGAGGGTTTG
GATGAGATGAGTCCCCTTGGACCTGGTCTGATCCTTGATGTCACCCAAGA
AAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGGCATTCCTCGCT
GCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATAATGCAGAGGTC
TTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCTGATGCATTAAT
CCTAAATGCTGCAGCAGCACTCTTGGTCAGTTGCAAAGTGAACACCTTGG
CTGAGGGTGTAGCCCTGGCGCGTGAAATTCAATTATCAGGGAAAGCTCTT
AATACGCTGGATTTATGGATAGAAGTCTCAAAGGGGGCGCCAGCATTTGC
TTGTGCATGAGTAATGGAGTTTTGAAGACTAAGAAAGACTTCATTGCAGT
ACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTATGCACGTCT
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