FC873248

Overview
NameFC873248
Unique NameFC873248
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:524..1320. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_METS3 (Anthranilate phosphoribosyltransferase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=trpD PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.604e-35
Identity = 82/211 (38.86%), Postives = 126/211 (59.72%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIE 674
            DVLEALGV I ++PE   + + E  + F+ +  YH AMKFV  VRK+L ++T+FNILGP+ NPA     V+GVY+E+LV  +   L+  G+K AL V+  +GLDE+S      + ++   +++ +   P D+G+ RC+ E L GG P  NAE+   +L+G++G               V+ K +++ +GV LA EI  SG+A   L+ +IE
Sbjct:  121 DVLEALGVNIYIEPEKSLKILKEINLCFLFAQNYHLAMKFVAGVRKELSIRTIFNILGPLTNPAGATMQVLGVYDESLVKPLCEVLKNVGVKSALSVYGQDGLDEISVSDKTSVCELRDGRLKCYEIAPEDFGMERCSKEDLVGGNPRENAEITLSILNGQKGPKRNAVVLNSAAALYVAGKADSIEDGVRLASEIIDSGRAKKQLEKFIE 331          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_THETH (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.736e-35
Identity = 87/210 (41.43%), Postives = 126/210 (60.00%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWI 671
            D+LEALGV ++  PE V   ++E G GF+ +  +HPAM+ V PVR +L V+TVFN+LGP+ NPA     V+GV++   +  MA AL+R G  R LVVH EG DE+  LG   +++V +     ++  P + G+ R  LE+L+GGGP  NA + RR+L G E+G                + K  +L EGVALARE+  SG+A   L+ ++
Sbjct:  120 DLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAGADAYVLGVFSPEWLAPMAEALERLG-ARGLVVHGEGADEL-VLGENRVVEVGK---GAYALTPEEVGLKRAPLEALKGGGPEENAALARRLLKGEEKGPLADAVALAAGAGFYAAGKTPSLKEGVALAREVLASGEAYLLLERYV 324          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_THET8 (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpD PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.736e-35
Identity = 87/210 (41.43%), Postives = 126/210 (60.00%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWI 671
            D+LEALGV ++  PE V   ++E G GF+ +  +HPAM+ V PVR +L V+TVFN+LGP+ NPA     V+GV++   +  MA AL+R G  R LVVH EG DE+  LG   +++V +     ++  P + G+ R  LE+L+GGGP  NA + RR+L G E+G                + K  +L EGVALARE+  SG+A   L+ ++
Sbjct:  120 DLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAGADAYVLGVFSPEWLAPMAEALERLG-ARGLVVHGEGADEL-VLGENRVVEVGK---GAYALTPEEVGLKRAPLEALKGGGPEENAALARRLLKGEEKGPLADAVALAAGAGFYAAGKTPSLKEGVALAREVLASGEAYLLLERYV 324          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_THET2 (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=trpD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.736e-35
Identity = 87/210 (41.43%), Postives = 126/210 (60.00%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWI 671
            D+LEALGV ++  PE V   ++E G GF+ +  +HPAM+ V PVR +L V+TVFN+LGP+ NPA     V+GV++   +  MA AL+R G  R LVVH EG DE+  LG   +++V +     ++  P + G+ R  LE+L+GGGP  NA + RR+L G E+G                + K  +L EGVALARE+  SG+A   L+ ++
Sbjct:  120 DLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAGADAYVLGVFSPEWLAPMAEALERLG-ARGLVVHGEGADEL-VLGENRVVEVGK---GAYALTPEEVGLKRAPLEALKGGGPEENAALARRLLKGEEKGPLADAVALAAGAGFYAAGKTPSLKEGVALAREVLASGEAYLLLERYV 324          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_THEPX (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=trpD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.736e-35
Identity = 81/214 (37.85%), Postives = 123/214 (57.48%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 683
            DVL  LG  I++ PE  +R ++E G+GF+ + KYH AMK V  +RK+L  +TVFN+LGP+ NPA V   V+GVY++ L   +A  L R G ++A+VVH  +GLDE++   P  + +V + K+  +  DP DYGIP   LE L+G     NA+++  +L GE+G               +   V  L EG+ +A  +  +G AL+ L   +E  +
Sbjct:  122 DVLMELGFDIEMVPEKTKRLIEEKGMGFLFAPKYHVAMKNVAGIRKELGTRTVFNVLGPLTNPAFVKGQVLGVYDKELTHPLAEVLLRLGTEKAMVVHGFDGLDEITTTSPTFVSEVKEGKVIDYVIDPEDYGIPYAKLEDLEGKDAKENAQIILNILKGEKGPKRDIVVLNAAAALYIGKVVEDLKEGIKVANYLIDTGLALDKLTEILEYQR 335          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_THEP3 (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.736e-35
Identity = 81/214 (37.85%), Postives = 123/214 (57.48%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 683
            DVL  LG  I++ PE  +R ++E G+GF+ + KYH AMK V  +RK+L  +TVFN+LGP+ NPA V   V+GVY++ L   +A  L R G ++A+VVH  +GLDE++   P  + +V + K+  +  DP DYGIP   LE L+G     NA+++  +L GE+G               +   V  L EG+ +A  +  +G AL+ L   +E  +
Sbjct:  122 DVLMELGFDIEMVPEKTKRLIEEKGMGFLFAPKYHVAMKNVAGIRKELGTRTVFNVLGPLTNPAFVKGQVLGVYDKELTHPLAEVLLRLGTEKAMVVHGFDGLDEITTTSPTFVSEVKEGKVIDYVIDPEDYGIPYAKLEDLEGKDAKENAQIILNILKGEKGPKRDIVVLNAAAALYIGKVVEDLKEGIKVANYLIDTGLALDKLTEILEYQR 335          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_HYPNA (Anthranilate phosphoribosyltransferase OS=Hyphomonas neptunium (strain ATCC 15444) GN=trpD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.736e-35
Identity = 82/214 (38.32%), Postives = 118/214 (55.14%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 683
            DVLEALG+ ++L     + C++ AG+GF+ +  YH AM+ V P+R KL ++T+FN+LGP+ NPA   ++V+GVY++  V  MA AL+  G + A VVH   G+DE+S  GP  + +VT   I  F   P D G+P   L +L+GG P  N   +R +L G  G               VS  V  L  GV  A +   SG A  TL+  +  S+
Sbjct:  125 DVLEALGLQLELSDTAFKSCLEIAGVGFLFARSYHSAMRHVAPIRHKLGIRTIFNLLGPLSNPAGAEYSVLGVYDKQWVTPMAEALKALGTRCAWVVHGLAGIDEISISGPTDVCEVTPASIRHFQITPSDAGLPSHPLSTLEGGAPEENTAAIRDLLDGREGPFRDIVLINAAAGLHVSGMVADLPAGVQRAAQAIDSGAARETLNTLVRTSR 338          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_DESRM (Anthranilate phosphoribosyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.736e-35
Identity = 81/214 (37.85%), Postives = 117/214 (54.67%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 683
            DVLE LGV + L PE    C+D+ GI F+ +   H AMK+    RK++ ++TVFNILGP+ NPA     V+GVY+ +L   +A  L   G KR+ V+H   GLDE+S  G  L+ +V   +++    DP+DYG+ R  + +L GG    NA +++ +LSG  G                   V  LA G+ LA +I   G AL  L+L +E S+
Sbjct:  122 DVLEQLGVFVQLTPEEAGLCLDQVGIAFLFAPLLHGAMKYAAAPRKEIGIRTVFNILGPLTNPAFAENQVLGVYSSDLAPVLAQVLANLGTKRSFVIHGCGGLDEISLAGEALVYEVKDNQVKEMIIDPMDYGLDRAPISALAGGDAKRNARMIKNILSGAPGPQRDTIIINAALGLIAGGLVRDLAMGIRLAEQIIDEGYALKKLNLLVEFSQ 335          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_SYMTH (Anthranilate phosphoribosyltransferase OS=Symbiobacterium thermophilum GN=trpD PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.573e-35
Identity = 81/207 (39.13%), Postives = 119/207 (57.49%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 662
            DVLEALG+ +DL PE V RC+DE GIGF+ +   H +MK V PVR+++ ++ +FN+LGP+ NPA     ++GVY+ NL   +A  L   G+K ALVVH ++G+DE+S   P ++ ++    +  +   P D G+ R   E ++GG    NA +   VLSGE G                + +V TL EGV LA +   SG+A   L+
Sbjct:  121 DVLEALGIHLDLTPEEVGRCIDEVGIGFLYAPALHTSMKHVAPVRREIGLRNIFNLLGPLTNPAMAQAQLMGVYDPNLTEPLARVLGNLGVKHALVVHGTDGVDEISISAPTVVSEMRDGFVHTYRVVPEDVGLSRAPREYIRGGTKEENARITESVLSGEPGPRRDVVLLNAAAALLAADRVRTLREGVELAAQSIDSGEARRVLE 327          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_RHOPB (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=trpD PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.573e-35
Identity = 89/216 (41.20%), Postives = 117/216 (54.17%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKGA 689
            DVL ALGV ID+ P  V RC+ EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP+ NPA V   +VGV++   V  +A  L+  G + A VVH S+GLDE++  GP  +  +   KI  F   P D G+PR   + L+GG    NA  L+ VL G+                 V  + NTL +GVA   +   SG A   L   I VS  A
Sbjct:  123 DVLAALGVKIDITPAEVGRCIKEAGIGFMFAPTHHPAMKNVGPTRVELATRTIFNLLGPLSNPAGVTRQMVGVFSRQWVQPLAQVLKNLGSESAWVVHGSDGLDEITISGPTFVAALADGKITTFEITPEDAGLPRAGADVLKGGDAEANAVALQGVLDGKPSAYRDVALLNAAAALIVGGRANTLKDGVAQGAQALDSGAAAAKLKQLIAVSNAA 338          
The following BLAST results are available for this feature:
BLAST of FC873248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_METS31.604e-3538.86Anthranilate phosphoribosyltransferase OS=Methanob... [more]
TRPD_THETH2.736e-3541.43Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_THET82.736e-3541.43Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_THET22.736e-3541.43Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_THEPX2.736e-3537.85Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_THEP32.736e-3537.85Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_HYPNA2.736e-3538.32Anthranilate phosphoribosyltransferase OS=Hyphomon... [more]
TRPD_DESRM2.736e-3537.85Anthranilate phosphoribosyltransferase OS=Desulfot... [more]
TRPD_SYMTH3.573e-3539.13Anthranilate phosphoribosyltransferase OS=Symbioba... [more]
TRPD_RHOPB3.573e-3541.20Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG06FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873248 ID=FC873248; Name=FC873248; organism=Citrus clementina; type=EST; length=797bp
CTCAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACC
CTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACT
GTATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGC
TGTGGTTGGTGTTTACAATGAAAACTTGGTACTCAAAATGGCCAATGCAC
TGCAACGATTTGGCCTGAAAAGAGCATTGGTTGTTCACTCAGAGGGTTTG
GATGAGATGAGTCCCCTTGGACCTGGTCTGATCCTTGATGTCACCCAAGA
AAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGGCATTCCTCGCT
GCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATAATGCAGAGGTC
TTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCTGATGCATTAAT
CCTAAATGCTGCAGCAGCACTCTTGGTCAGTTGCAAAGTGAACACCTTGG
CTGAGGGTGTAGCCCTGGCGCGTGAAATTCAATTATCAGGGAAAGCTCTT
AATACGCTGGATTTATGGATAGAAGTCTCAAAGGGGGCGCCAGCATTTGC
TTGTGCATGAGTAATGGAGTTTTGAAGACTAAGAAAGACTTCATTGCAGT
ACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTATGCACGTCT
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