FC873248

Overview
NameFC873248
Unique NameFC873248
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_MYCLE (Anthranilate phosphoribosyltransferase OS=Mycobacterium leprae GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 77/223 (34.53%), Postives = 110/223 (49.33%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRA--LVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAE-------GVALAREIQLSGKALNTLDLWIEVSK 683
            D LEALGV IDL PE V   + E GIGF  +  + P+ ++   VR ++ V TVFNILGP+ NPA     ++G    NL   MA     F  +R+  LVVH  +GLDE++      I  V    +++ +FDP+++G  R  L+ L GG    NA  +R VL+G +G                   +++ AE       G+A A     SG A   L  W+  S+
Sbjct:  145 DTLEALGVRIDLGPEQVANSLAEIGIGFCFAPLFQPSYRYASAVRHEIGVPTVFNILGPLTNPAWPRAGLIGCAFGNLAEVMAGV---FAARRSSVLVVHGDDGLDELTTTTTSTIWRVQAGTVDKLTFDPVEFGFARAHLDDLLGGDAQTNAAKVRAVLAGAKGPVRDAVVLNAAGAIVAYAGLSSHAEWSPAWDDGLARASAAIDSGAAEQLLARWVRFSQ 364          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_MYCLB (Anthranilate phosphoribosyltransferase OS=Mycobacterium leprae (strain Br4923) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 77/223 (34.53%), Postives = 110/223 (49.33%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRA--LVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAE-------GVALAREIQLSGKALNTLDLWIEVSK 683
            D LEALGV IDL PE V   + E GIGF  +  + P+ ++   VR ++ V TVFNILGP+ NPA     ++G    NL   MA     F  +R+  LVVH  +GLDE++      I  V    +++ +FDP+++G  R  L+ L GG    NA  +R VL+G +G                   +++ AE       G+A A     SG A   L  W+  S+
Sbjct:  145 DTLEALGVRIDLGPEQVANSLAEIGIGFCFAPLFQPSYRYASAVRHEIGVPTVFNILGPLTNPAWPRAGLIGCAFGNLAEVMAGV---FAARRSSVLVVHGDDGLDELTTTTTSTIWRVQAGTVDKLTFDPVEFGFARAHLDDLLGGDAQTNAAKVRAVLAGAKGPVRDAVVLNAAGAIVAYAGLSSHAEWSPAWDDGLARASAAIDSGAAEQLLARWVRFSQ 364          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_CORGL (Anthranilate phosphoribosyltransferase OS=Corynebacterium glutamicum GN=trpD PE=3 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 61/160 (38.12%), Postives = 93/160 (58.13%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQE-KIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG 521
            DVLEAL + + LD +   +  + +   F+ +  Y+PA+  V+PVR+ LK  T+FN LGP+L+PA     ++GV N N    +A   +  G  RALVVH  G DE++  G  L+ ++ ++  IE ++ +P D G+ R TLE L GG    NAE +R   +G
Sbjct:  126 DVLEALNIPLGLDVDRAVKWFEASNFTFLFAPAYNPAIAHVQPVRQALKFPTIFNTLGPLLSPARPERQIMGVANANHGQLIAEVFRELGRTRALVVHGAGTDEIAVHGTTLVWELKEDGTIEHYTIEPEDLGLGRYTLEDLVGGLGTENAEAMRATFAG 285          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_CORGB (Anthranilate phosphoribosyltransferase OS=Corynebacterium glutamicum (strain R) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 61/160 (38.12%), Postives = 93/160 (58.13%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQE-KIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG 521
            DVLEAL + + LD +   +  + +   F+ +  Y+PA+  V+PVR+ LK  T+FN LGP+L+PA     ++GV N N    +A   +  G  RALVVH  G DE++  G  L+ ++ ++  IE ++ +P D G+ R TLE L GG    NAE +R   +G
Sbjct:  126 DVLEALNIPLGLDVDRAVKWFEASNFTFLFAPAYNPAIAHVQPVRQALKFPTIFNTLGPLLSPARPERQIMGVANANHGQLIAEVFRELGRTRALVVHGAGTDEIAVHGTTLVWELKEDGTIEHYTIEPEDLGLGRYTLEDLVGGLGTENAEAMRATFAG 285          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD2_ANASP (Anthranilate phosphoribosyltransferase 2 OS=Anabaena sp. (strain PCC 7120) GN=trpD2 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 69/207 (33.33%), Postives = 116/207 (56.04%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILD---VTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE-RGXXXXXXXXXXXXXXXVSCKVNTL--AEGVALAREIQLSGKA 647
            DVLEALGV +   PE V+  + E GI F+ +  +HPA+K V  +R+ L+++TVFN+LGP++NP      VVG++   L+  +A AL   G ++A+V+H  G + +   G G + D   ++  +++  + +P + G+    + +L+GG    NAE+L+ VL G+                  V+  V  L  A+GV++A+EI  +G A
Sbjct:  145 DVLEALGVNLGASPEKVQAALQEVGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGPLVNPLRPTGQVVGLFTPKLLTTVAQALDNLGKQKAIVLH--GRERLDEAGLGDLTDLAVLSDGELQLTTINPQEVGVTPAPIGALRGGDVQENAEILKAVLQGKGTQAQQDAVALNAALALQVAGAVPLLDHAQGVSVAKEILQTGTA 349          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD1_ANASP (Anthranilate phosphoribosyltransferase 1 OS=Anabaena sp. (strain PCC 7120) GN=trpD1 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 69/215 (32.09%), Postives = 113/215 (52.56%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCK--------VNTLAEGVALAREIQLSGKALNTLD 662
            DVLEALG+ ++ + + V+  V E GI F+ +  +HPA+K V  +RK LKV+T+FN+LGP++NP      ++GV +  L+ ++A AL   G ++A+ +H  E LDE        +  +   K+   + +P + G+     E L+GG  A NAE+L+ +L G +G               +           V    +G+A+ARE+  SG A   L+
Sbjct:  144 DVLEALGINLNANADKVQAAVSEVGITFLFAPGWHPALKTVATLRKTLKVRTIFNLLGPLVNPLRPTGQIIGVNDPLLIEEIALALSHLGCRKAIALHGRERLDEAGLADVTDLAILQDGKVSCLALNPQELGLNHAPTEVLRGGDVAENAEILKAILQG-KGTQAQQDVVALNTALALQVGEAITTTDIVEGCVKGIAIAREVLQSGAAWTKLE 357          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_SYNS3 (Anthranilate phosphoribosyltransferase OS=Synechococcus sp. (strain CC9311) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.408e-23
Identity = 62/161 (38.51%), Postives = 92/161 (57.14%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            DVLE LG+ +    E V   +  +G+ F+ +  +HPA+  + P+R+ L V+TVFN+LGP++NP      V+GV    L+  MA ALQ+ GL RA+VVH + GLDE S  GP  +  +    +        D+G+    LE+L+GG    N ++L  VL GE
Sbjct:  129 DVLEGLGLHLKAPLESVLGALPASGVTFLFAPAWHPALVNLAPLRRSLGVRTVFNLLGPLVNPLTPEAQVLGVAKAELLDPMAEALQQLGLTRAVVVHGAGGLDEASLEGPNEVRILENGNVRSDQLSASDFGLTLAPLEALRGGDLVTNQQILEAVLKGE 289          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_SYNPX (Anthranilate phosphoribosyltransferase OS=Synechococcus sp. (strain WH8102) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.408e-23
Identity = 63/160 (39.38%), Postives = 95/160 (59.38%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG 521
            DVLE LG+ +    + V   +  AG+ F+ +  +HPA+  + P+R+ L V+TVFN+LGP++NP      V+GV  ++L+  MA ALQR GL+RA+VVH + GLDE S  GP  +  +    I      P + G+    LE+L+GG    N  +L++VL G
Sbjct:  135 DVLEGLGLNLKAPLQLVVDAIPAAGVTFLFAPAWHPALVNLAPLRRSLGVRTVFNLLGPLVNPLKPQAQVLGVAKKDLLDPMAGALQRLGLERAVVVHGAGGLDEASLAGPNDLRFIEAGAIRSLQLSPDELGLATADLETLKGGDLDCNQTILQQVLQG 294          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_PROMM (Anthranilate phosphoribosyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.408e-23
Identity = 64/160 (40.00%), Postives = 93/160 (58.13%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG 521
            DVLE LG+ +      V   + E G+ F+ +  +HPA+  + P+R+ L V+TVFN+LGP++NP      V+GV    L+  MA ALQR GL+RA+VVH + GLDE S  G   +  +    + + S D  + G+ R  L++LQGG  A N  +L  VL G
Sbjct:  132 DVLEGLGLQLKAPLVSVVEALVEVGVTFLFAPAWHPALVNLAPLRRSLGVRTVFNLLGPLVNPLQPNAQVLGVAKAELLNPMAEALQRLGLQRAVVVHGAGGLDEASLEGANAMRLLENGHLRQASIDSAELGLTRAPLQALQGGDLATNQAILSAVLQG 291          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_ERYLH (Anthranilate phosphoribosyltransferase OS=Erythrobacter litoralis (strain HTCC2594) GN=trpD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.408e-23
Identity = 68/213 (31.92%), Postives = 107/213 (50.23%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            D LEALG+ ++       + + E GI F+ +  +HPAM  ++P+R++L  +T+FN++GP+ NPA V   ++G+     V   A A  + G +R  +V   EGLDE+S  G   + DV   + E         G+P   +E+++GG  A+NA  L+ +L G  G                +  V     G A+A E   SGKA   L  WIE++
Sbjct:  117 DTLEALGLDMEAVGRTAEKTLAEIGICFLFAKNHHPAMGRIQPIRQRLGKRTIFNLMGPLSNPAGVKRQLIGIARPGYVPIYAEAKAKLGTERTYIVSGDEGLDELSLAGGNELADVCGNEFEMRRVYAEMIGLPHAPVEAIRGGDAAHNAMALKALLEGTPGPYRDAVVFNAAATLMAAGAVEDWEVGAAMAVESLDSGKANELLGKWIEMA 329          
The following BLAST results are available for this feature:
BLAST of FC873248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_MYCLE1.078e-2334.53Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_MYCLB1.078e-2334.53Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_CORGL1.078e-2338.13Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_CORGB1.078e-2338.13Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD2_ANASP1.078e-2333.33Anthranilate phosphoribosyltransferase 2 OS=Anabae... [more]
TRPD1_ANASP1.078e-2332.09Anthranilate phosphoribosyltransferase 1 OS=Anabae... [more]
TRPD_SYNS31.408e-2338.51Anthranilate phosphoribosyltransferase OS=Synechoc... [more]
TRPD_SYNPX1.408e-2339.38Anthranilate phosphoribosyltransferase OS=Synechoc... [more]
TRPD_PROMM1.408e-2340.00Anthranilate phosphoribosyltransferase OS=Prochlor... [more]
TRPD_ERYLH1.408e-2331.92Anthranilate phosphoribosyltransferase OS=Erythrob... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG06FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873248 ID=FC873248; Name=FC873248; organism=Citrus clementina; type=EST; length=797bp
CTCAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACC
CTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACT
GTATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGC
TGTGGTTGGTGTTTACAATGAAAACTTGGTACTCAAAATGGCCAATGCAC
TGCAACGATTTGGCCTGAAAAGAGCATTGGTTGTTCACTCAGAGGGTTTG
GATGAGATGAGTCCCCTTGGACCTGGTCTGATCCTTGATGTCACCCAAGA
AAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGGCATTCCTCGCT
GCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATAATGCAGAGGTC
TTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCTGATGCATTAAT
CCTAAATGCTGCAGCAGCACTCTTGGTCAGTTGCAAAGTGAACACCTTGG
CTGAGGGTGTAGCCCTGGCGCGTGAAATTCAATTATCAGGGAAAGCTCTT
AATACGCTGGATTTATGGATAGAAGTCTCAAAGGGGGCGCCAGCATTTGC
TTGTGCATGAGTAATGGAGTTTTGAAGACTAAGAAAGACTTCATTGCAGT
ACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTATGCACGTCT
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