FC873248

Overview
NameFC873248
Unique NameFC873248
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:524..1320. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_PROMT (Anthranilate phosphoribosyltransferase OS=Prochlorococcus marinus (strain NATL2A) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.917e-22
Identity = 60/161 (37.27%), Postives = 97/161 (60.25%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            DVLE LG+ +++    V   + + GI F+ +  +HP++  + P+RK L V+T+FN+LGP++NP      V+GV   +L+  M+ AL+  GLKRA+VVH + GLDE S  G      + ++ I      P D G+ + + ESL+G G   N+ +L+ +L+GE
Sbjct:  130 DVLENLGLPLNVSSGKVVEALKKLGITFLFAPSWHPSLVNLAPLRKSLGVRTIFNLLGPLVNPLRPKSQVLGVAKADLLDPMSVALKGMGLKRAVVVHGAGGLDEASLAGANQFRFLDKDVIRSEIISPGDLGLTQISNESLKGDGLKTNSHILKSLLNGE 290          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_LEIXX (Anthranilate phosphoribosyltransferase OS=Leifsonia xyli subsp. xyli GN=trpD PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.917e-22
Identity = 60/162 (37.04%), Postives = 85/162 (52.47%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG 530
            DVL ALG+ + L PE V   +   GI F  ++ +HP       VR +L V TVFNILGP+ NPA    + VGV   + V  +    Q  G    +    +GLDE+S  G   + +V++  +     DP D G+P   +E L G   A+NA V+R VL+G+ G
Sbjct:  126 DVLAALGIDLTLPPERVAEVLRATGITFAFASAFHPGFANAAAVRSQLGVPTVFNILGPLCNPARPEASAVGVAPLDRVPLIVGVFQTRGATALVFRGDDGLDELSTTGHSHVWEVSRGLVTEHDIDPRDLGLPTAQIEDLLGKDAAHNAAVVRAVLAGQEG 287          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_SULIA (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain M.16.27) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.728e-22
Identity = 54/142 (38.03%), Postives = 85/142 (59.86%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESL 467
            DVLEALG  I + PE  +  V +    F+ S  YHPAMK V  VRK L ++T+FNILGP+ NPA   + ++GV++++ +  ++ +       + ++VH E G+DE+SP+G   +  V++  IE   FD  D+GI    ++ L
Sbjct:  120 DVLEALGYNIIVPPERAKELVHKTNFVFLFSQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKVILVHGEPGIDEVSPIGKTFMKIVSKRGIEEVKFDVTDFGISSIPIDKL 261          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_METTM (Anthranilate phosphoribosyltransferase OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=trpD PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.728e-22
Identity = 73/218 (33.49%), Postives = 110/218 (50.46%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH------SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPA-YNAEVLRRVLSG-----ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 662
            D+LEA GV I+L PE   R ++  GI FM +  +H A   V PVR++L  KTVFNILGP+ +PA     ++GV++  LV  +A  L+  G+KRA+VVH      +  +DE+S +GP L+  +  ++I      P D+G+    L+ L+       N  +   VL+G      R                ++   +TL  G   ARE   SG AL  ++
Sbjct:  124 DILEAAGVNIELGPEAACRSLETLGIAFMFAPLFHRATARVAPVRRELGFKTVFNILGPLTSPASAEVQLLGVFDPYLVGPVAEVLRNLGVKRAMVVHGFDGNMNPAMDEISTVGPTLVGFLEDDEIGIKRLMPPDFGVDVGQLQHLKAASTVDGNLRMFMDVLAGLDDTPGRKSRLDIALANAGALIYLAEMEDTLEGGTEAARETVESGAALRLME 341          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_BUCMH (Anthranilate phosphoribosyltransferase OS=Buchnera aphidicola subsp. Melaphis rhois GN=trpD PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.728e-22
Identity = 49/160 (30.63%), Postives = 97/160 (60.62%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            D+L+   + I++  +  +  +++  + F+ + +YH + K V  VRK LK +T+FNILGP+LNP+  P +V+GVY+  L++ +A+ L++    R+++V+S  +DE++   P  I ++   KI  ++  P  +G+      ++ GG P  N E++++V  G+
Sbjct:  121 DLLKEFDININISQKKSQEMLNKLNVCFLFAPQYHASFKHVSLVRKILKTRTLFNILGPLLNPSNPPLSVIGVYSTKLMIPIAHILKKLNRHRSIIVYSNNIDEVTLHSPTNITELKNSKITSYTLYPESFGVHFHDKNTILGGTPKENYEIVKKVFQGK 280          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_SULIM (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=trpD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.722e-21
Identity = 53/142 (37.32%), Postives = 85/142 (59.86%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESL 467
            DVLEALG  I + PE  +  V +    F+ +  YHPAMK V  VRK L ++T+FNILGP+ NPA   + ++GV++++ +  ++ +       + ++VH E G+DE+SP+G   +  V++  IE   FD  D+GI    ++ L
Sbjct:  120 DVLEALGYNIIVPPERAKELVHKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKVILVHGEPGIDEVSPIGKTFMKIVSKRGIEEVKFDVTDFGISSIPIDKL 261          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_SULIK (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=trpD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.722e-21
Identity = 53/142 (37.32%), Postives = 85/142 (59.86%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESL 467
            DVLEALG  I + PE  +  V +    F+ +  YHPAMK V  VRK L ++T+FNILGP+ NPA   + ++GV++++ +  ++ +       + ++VH E G+DE+SP+G   +  V++  IE   FD  D+GI    ++ L
Sbjct:  120 DVLEALGYNIIVPPERAKELVHKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKVILVHGEPGIDEVSPIGKTFMKIVSKRGIEEVKFDVTDFGISSIPIDKL 261          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_METS5 (Anthranilate phosphoribosyltransferase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=trpD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.722e-21
Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSE-GLDEMSPLGPGLILDVTQEKIERFSFD 425
            D LE+LG  I + PE  +  +      F+ +  YHP+MK V PVRK L V+T+FN+LGP+ NPA     V+GVY+   + K+A A  + G  + ++VH E GLDE+SP G   I +VT  K+E +++D
Sbjct:  120 DFLESLGYNIQVPPEKAKDLLSRNNFVFLFAQLYHPSMKNVAPVRKVLGVRTIFNLLGPLTNPAGSERQVMGVYSLPFMRKLAEAALKLGYVKLVLVHGEPGLDEVSPQGKTYITEVTGSKVEEYTYD 247          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_GEOTN (Anthranilate phosphoribosyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=trpD PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.722e-21
Identity = 65/207 (31.40%), Postives = 102/207 (49.28%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRAL-VVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSC-KVNTLAEGVALAREIQLSGKALNTL 659
            DVLE LG+ I   P+  +  ++  G+ F+ +  YH AMK     RK++  +TVFN++GP+ NPA     VVGVY+     K+A  ++R G +  L V   +GLDE S      ++++    I RF   P + G+PR  L  +Q   P  +A +L  V++                    +  K  T+A+GV +A++  LS  A   L
Sbjct:  121 DVLERLGINIQSSPDAAKEALETNGLTFLYAPLYHTAMKHAAGPRKEIGFRTVFNLIGPLANPARCKRQVVGVYSTRYAEKLAETMRRLGSEHVLFVTGRDGLDECSIATETDVVELKDGAIRRFVITPEEVGLPRGELADVQVHNPEESAALLEAVMTVTAPESAVNIVALNAGVALYAAGKTKTIADGVTMAKDAILSNAAYRQL 327          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_SYNS9 (Anthranilate phosphoribosyltransferase OS=Synechococcus sp. (strain CC9902) GN=trpD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.249e-21
Identity = 64/162 (39.51%), Postives = 90/162 (55.56%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEK-IERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE 524
            DVLE LG+ +      V   +   G+ F+ +  +HPA+  + P+R+ L V+TVFN+LGP++NP      V+GV   +L+  MA AL + GL RA+VVH + GLDE S  G   +  V   K I      P D G+    LE+L+GG  A N  +L  VL GE
Sbjct:  131 DVLEGLGLNLKAPLASVVEAISTTGVTFLFAPAWHPALVNLAPLRRSLGVRTVFNLLGPLVNPLQPQAQVLGVARADLLDPMAGALDQLGLDRAVVVHGAGGLDEASLAGANELRMVEAGKPIATRFVSPDDLGLAAAPLEALRGGDLADNQRILENVLKGE 292          
The following BLAST results are available for this feature:
BLAST of FC873248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PROMT5.917e-2237.27Anthranilate phosphoribosyltransferase OS=Prochlor... [more]
TRPD_LEIXX5.917e-2237.04Anthranilate phosphoribosyltransferase OS=Leifsoni... [more]
TRPD_SULIA7.728e-2238.03Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_METTM7.728e-2233.49Anthranilate phosphoribosyltransferase OS=Methanob... [more]
TRPD_BUCMH7.728e-2230.63Anthranilate phosphoribosyltransferase OS=Buchnera... [more]
TRPD_SULIM1.722e-2137.32Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_SULIK1.722e-2137.32Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_METS51.722e-2142.19Anthranilate phosphoribosyltransferase OS=Metallos... [more]
TRPD_GEOTN1.722e-2131.40Anthranilate phosphoribosyltransferase OS=Geobacil... [more]
TRPD_SYNS92.249e-2139.51Anthranilate phosphoribosyltransferase OS=Synechoc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG06FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873248 ID=FC873248; Name=FC873248; organism=Citrus clementina; type=EST; length=797bp
CTCAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACC
CTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACT
GTATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGC
TGTGGTTGGTGTTTACAATGAAAACTTGGTACTCAAAATGGCCAATGCAC
TGCAACGATTTGGCCTGAAAAGAGCATTGGTTGTTCACTCAGAGGGTTTG
GATGAGATGAGTCCCCTTGGACCTGGTCTGATCCTTGATGTCACCCAAGA
AAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGGCATTCCTCGCT
GCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATAATGCAGAGGTC
TTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCTGATGCATTAAT
CCTAAATGCTGCAGCAGCACTCTTGGTCAGTTGCAAAGTGAACACCTTGG
CTGAGGGTGTAGCCCTGGCGCGTGAAATTCAATTATCAGGGAAAGCTCTT
AATACGCTGGATTTATGGATAGAAGTCTCAAAGGGGGCGCCAGCATTTGC
TTGTGCATGAGTAATGGAGTTTTGAAGACTAAGAAAGACTTCATTGCAGT
ACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTATGCACGTCT
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