FC873248

Overview
NameFC873248
Unique NameFC873248
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:524..1320. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_METEP (Anthranilate phosphoribosyltransferase OS=Methylobacterium extorquens (strain PA1) GN=trpD PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34
Identity = 85/213 (39.91%), Postives = 114/213 (53.52%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            DVL ALGV I L PE + RC+ EAG+ FM +  +H AM+ V PVR +L  +T+FN+LGP+ NPA V   V GV        +   L   G +R   VH S+GLDE++  GP  ++ +       F+ DP + G+P  TL+ L+GG P +NA  L  VL G R                V+    +LAEGVA A+E   SG A  TL   + VS
Sbjct:  123 DVLAALGVKIGLPPEALARCLSEAGLCFMFAQTHHGAMRHVAPVRTELPFRTIFNMLGPLSNPAGVTAQVFGVSRPAWAEPLTRVLATLGSRRVWTVHGSDGLDEITTTGPTAVVALENGAFRHFTLDPREVGLPLATLDDLRGGDPEHNAAALGAVLEGTRNAYRDIAVLNAGAGLVVAGAAGSLAEGVARAQEAIDSGAARGTLARLVAVS 335          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_CAUCR (Anthranilate phosphoribosyltransferase OS=Caulobacter crescentus GN=trpD PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34
Identity = 84/201 (41.79%), Postives = 109/201 (54.23%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKA 647
            DVL ALGV ID   E  R+ +DEAGI F+ +  +H AMK V P+R++L  +T+FN+LGP+ NPA     VVGV     V  +A AL   G +RA  VH  G+DE++  G   + +     +  F   P   G+PR  L  L GG PA+NA  L R+  GE G               V+ KV TL EGVALA E   SG+A
Sbjct:  124 DVLTALGVNIDATREQQRKALDEAGICFLFAQAHHGAMKHVSPIRQQLGFRTIFNLLGPLTNPAGAKRQVVGVSAPRFVEPIAKALGALGAERAWSVHGSGMDELTTTGETEVAEWRDGVVRLFKITPEAVGLPRAALADLTGGDPAFNAAALTRLFDGETGPYRDIVLLNAAAAFLVADKVETLVEGVALAAEAIDSGRA 324          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_CAUCN (Anthranilate phosphoribosyltransferase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=trpD PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34
Identity = 84/201 (41.79%), Postives = 109/201 (54.23%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKA 647
            DVL ALGV ID   E  R+ +DEAGI F+ +  +H AMK V P+R++L  +T+FN+LGP+ NPA     VVGV     V  +A AL   G +RA  VH  G+DE++  G   + +     +  F   P   G+PR  L  L GG PA+NA  L R+  GE G               V+ KV TL EGVALA E   SG+A
Sbjct:  124 DVLTALGVNIDATREQQRKALDEAGICFLFAQAHHGAMKHVSPIRQQLGFRTIFNLLGPLTNPAGAKRQVVGVSAPRFVEPIAKALGALGAERAWSVHGSGMDELTTTGETEVAEWRDGVVRLFKITPEAVGLPRAALADLTGGDPAFNAAALTRLFDGETGPYRDIVLLNAAAAFLVADKVETLVEGVALAAEAIDSGRA 324          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_ALKMQ (Anthranilate phosphoribosyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=trpD PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 6.739e-34
Identity = 80/214 (37.38%), Postives = 120/214 (56.07%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 683
            DVLE LGV IDL P+ V  CV++  +GFM + K+H AMK+    R++L V+T+FNILGP+ NPA V   V+GV++E+L   MA  L+  G++R +VVH  +GLDE++      + ++    I  +  DP  + IP    E L GG    NA ++  ++ GE G               V    N+L EG+  A E+   G AL+ L+  I++S+
Sbjct:  122 DVLEKLGVNIDLTPKQVETCVEQVNMGFMFAPKFHQAMKYAAAARRELGVRTIFNILGPLTNPAKVKGQVLGVFDESLTEVMAQVLKELGVERGMVVHGLDGLDEITTTTKTKVSELKNGMISNYVIDPRQFDIPLTDKEDLAGGDAEKNASIILNIVKGETGGKRNMVLINAGAAIYVGNAANSLQEGIDRAAEVIDMGLALDKLNQLIKLSQ 335          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_PERMH (Anthranilate phosphoribosyltransferase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=trpD PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.802e-34
Identity = 82/216 (37.96%), Postives = 124/216 (57.41%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG-ERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKG 686
            D++EALGV IDL PE     +D  G+GF+ +  YHPAMK V   R+++ V+T+FNILGP+ NPA   + ++GVY+++LV  +A  L   G++RA VVH  EGLDE+S     ++ +V    I  +S  P D+GI R +L+ ++GG   +N ++   +L G +R                    V+++ EG+ LA+E   S KA   L+   E SKG
Sbjct:  123 DIMEALGVKIDLSPEQAAEAIDRIGLGFLFAPVYHPAMKNVIRQRREIGVRTIFNILGPLSNPAGAKYQLLGVYDKDLVEPVARVLSLLGIERAYVVHGMEGLDEVSITTDTMVAEVDGGDISVYSVKPEDFGIERASLDDIRGGDLDFNLQIALDILEGKDRSRKTDFVSLNAGFAFHAVGVVDSVKEGIELAKETIYSKKAYEILEKLREYSKG 338          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_METAC (Anthranilate phosphoribosyltransferase OS=Methanosarcina acetivorans GN=trpD PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.150e-33
Identity = 78/202 (38.61%), Postives = 116/202 (57.43%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKAL 650
            DVLEALG+ +DL P  VR+ +++ GIGFM +  +HPAMK V  VRKKL V+TVFNILGP+ NPA     VVGV+++ L   +A AL   G + ALVVH +G+DE+S  G   + ++   ++  ++  P   G+ R   E ++GG P  NA  L  +  G++G               VS  V ++ + + +A +   SGK +
Sbjct:  124 DVLEALGIKVDLTPGQVRKTIEKIGIGFMFAPVFHPAMKRVAGVRKKLGVRTVFNILGPLTNPAGAKGQVVGVFDKKLCEPIAYALAELGTEHALVVHGDGMDEISNTGETFVAELKDGEVSTYTITPEAMGMLRAKPEDIKGGTPKENARDLLCIFKGQKGPKRDLVILNAAAALYVSGIVGSIRQAIPIAEDAIDSGKVM 325          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_HALMA (Anthranilate phosphoribosyltransferase OS=Haloarcula marismortui GN=trpD PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.150e-33
Identity = 82/207 (39.61%), Postives = 122/207 (58.94%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGE-RGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 662
            DVLE +GV I+ +P  V   ++  GIGFM++  +HPAMK V   R++L ++TVFNILGP+ NPA     V+GVY+ +LV  MA AL R  ++RALVVH +GLDE++  G  ++ +VT ++I  ++  P D G+    +E++ GG P  NA  LR +++G+  G               V+   +T   GV  AR+   SG A + LD
Sbjct:  120 DVLEEVGVDIEAEPPDVEETIERDGIGFMLAPVFHPAMKAVIGPRQELGMRTVFNILGPLTNPADADAQVLGVYDPDLVPVMAEALARLDVERALVVHGDGLDEIAIHGETVVAEVTDDRIAEYTITPEDMGLETRDIEAISGGSPEENAADLRGIVTGDVTGAKRDIILANAGAAIYVAGVADTHEAGVEQARQAIESGAAADKLD 326          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_DECAR (Anthranilate phosphoribosyltransferase OS=Dechloromonas aromatica (strain RCB) GN=trpD PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.150e-33
Identity = 81/214 (37.85%), Postives = 121/214 (56.54%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEG-LDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 683
            DVLEALG  I L PE V  C+DE G GFM +  +H AMK V PVR+++ V+T+FNILGP+ NPA  P  ++GV++ +LV  +   +QR G +R LVVH +  LDE+S     ++ ++   +I  +   P DYG+   +L +L+ G  A + E+L  VL  + G               V+   +++ +G+  ARE   SG A   LD +I  +K
Sbjct:  124 DVLEALGANIMLSPEQVAACIDETGFGFMFAPNHHTAMKHVAPVRREMGVRTIFNILGPLTNPAGAPNTLMGVFHPDLVGILVRVMQRLGAERVLVVHGKDCLDEISLGAATMVGELNNGEIREYEIHPEDYGLQMQSLRNLRVGSAAESREMLLGVLGNQPGPAREIVCLNAGAALYVANVADSIGDGIVRAREAIASGAARAKLDQFINATK 337          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_ACIAC (Anthranilate phosphoribosyltransferase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.150e-33
Identity = 82/207 (39.61%), Postives = 121/207 (58.45%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLD 662
            DV+E+LGV IDL PE + RC+ + GIGFM +  +HPAMK V PVRK+L V+T+FNILGP+ NPA  P  ++GV++ +LV     ALQR G + ALVV+  +G+DE+S     ++ ++   +I  +   P D+G+   +  +L+   P  + E+L  VL GE G                +    T+A+G+A AR    SG AL  L+
Sbjct:  126 DVMESLGVHIDLPPEAIARCIADTGIGFMFAPNHHPAMKNVAPVRKELGVRTLFNILGPLTNPAGAPNILMGVFHPDLVGIQVRALQRLGAEHALVVYGRDGMDEVSLGAATMVGELKNGEITEYEIHPEDFGLAMSSNRALKVETPEQSREMLLSVLRGEPGSAREIVCLNAGVALYAANVAATMADGIARARAALDSGAALARLE 332          
BLAST of FC873248 vs. ExPASy Swiss-Prot
Match: TRPD_METPB (Anthranilate phosphoribosyltransferase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=trpD PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.501e-33
Identity = 85/213 (39.91%), Postives = 114/213 (53.52%), Query Frame = 3
Query:   45 DVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH-SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGXXXXXXXXXXXXXXXVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVS 680
            DVL ALGV I L PE + RC+ EAG+ FM +  +H AM+ V PVR +L  +T+FN+LGP+ NPA V   V GV        +   L   G +R   VH S+GLDE++  GP  ++ +    +  F+ DP + G+P  TL+ L+GG P +NA  L  VL G R                V+    TLAEGVA A+    SG A  TL   + VS
Sbjct:  123 DVLVALGVKIGLPPEALARCLSEAGLCFMFAQTHHGAMRHVAPVRTELPFRTIFNMLGPLSNPAGVTAQVFGVSRPAWAEPLTRVLATLGSRRVWTVHGSDGLDEITTTGPTAVIALEDGALSHFTIDPREVGLPLATLDDLRGGDPDHNAAALSAVLEGARSAYRDIAVLNAGAGLVVAGAAGTLAEGVARAQGAIDSGAARATLARLVAVS 335          
The following BLAST results are available for this feature:
BLAST of FC873248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_METEP6.739e-3439.91Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_CAUCR6.739e-3441.79Anthranilate phosphoribosyltransferase OS=Caulobac... [more]
TRPD_CAUCN6.739e-3441.79Anthranilate phosphoribosyltransferase OS=Caulobac... [more]
TRPD_ALKMQ6.739e-3437.38Anthranilate phosphoribosyltransferase OS=Alkaliph... [more]
TRPD_PERMH8.802e-3437.96Anthranilate phosphoribosyltransferase OS=Persepho... [more]
TRPD_METAC1.150e-3338.61Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_HALMA1.150e-3339.61Anthranilate phosphoribosyltransferase OS=Haloarcu... [more]
TRPD_DECAR1.150e-3337.85Anthranilate phosphoribosyltransferase OS=Dechloro... [more]
TRPD_ACIAC1.150e-3339.61Anthranilate phosphoribosyltransferase OS=Acidovor... [more]
TRPD_METPB1.501e-3339.91Anthranilate phosphoribosyltransferase OS=Methylob... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2DG06FM1 AbsDev Citrus clementina cDNA clone KN0AAI2DG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873248 ID=FC873248; Name=FC873248; organism=Citrus clementina; type=EST; length=797bp
CTCAGCAAGGGAGTCGGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTG
TTAGAAGCTTTGGGTGTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAG
GTGTGTGGATGAGGCAGGAATTGGTTTCATGATGTCGACAAAGTATCACC
CTGCAATGAAGTTTGTCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACT
GTATTCAATATATTGGGTCCTATGTTGAATCCTGCATGTGTGCCATTCGC
TGTGGTTGGTGTTTACAATGAAAACTTGGTACTCAAAATGGCCAATGCAC
TGCAACGATTTGGCCTGAAAAGAGCATTGGTTGTTCACTCAGAGGGTTTG
GATGAGATGAGTCCCCTTGGACCTGGTCTGATCCTTGATGTCACCCAAGA
AAAAATTGAGAGATTCTCATTTGATCCATTGGACTACGGCATTCCTCGCT
GCACTTTAGAAAGCTTGCAAGGTGGAGGCCCAGCATATAATGCAGAGGTC
TTAAGGCGTGTACTGTCTGGAGAAAGAGGGGCAATAGCTGATGCATTAAT
CCTAAATGCTGCAGCAGCACTCTTGGTCAGTTGCAAAGTGAACACCTTGG
CTGAGGGTGTAGCCCTGGCGCGTGAAATTCAATTATCAGGGAAAGCTCTT
AATACGCTGGATTTATGGATAGAAGTCTCAAAGGGGGCGCCAGCATTTGC
TTGTGCATGAGTAATGGAGTTTTGAAGACTAAGAAAGACTTCATTGCAGT
ACCATGAATAACAGGTAGGTCAAAAGTTGGCTTGCTTATGCACGTCT
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