FC873260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_METJA (V-type ATP synthase alpha chain OS=Methanocaldococcus jannaschii GN=atpA PE=3 SV=2) HSP 1 Score: 330.487 bits (846), Expect = 6.631e-90 Identity = 165/248 (66.53%), Postives = 189/248 (76.21%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY 745 VR PRP KL + PL+TGQRV D F GGT AIPG FG GKTV L+K+S++D VVY+GCGERGNEM EV+ +FP L + +M RT L+ANTSNMPVAAREAS+YTGITIAEYFRDMGY V + ADSTSRWAEA+REISGRL EMP + GYPAYLA+RLA FYERAG+V LG R G V IVGAVSPPGGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y Sbjct: 195 VRKPRPYKEKLPPEIPLITGQRVEDTFFTLAKGGTAAIPGPFGSGKTVTQHQLAKWSDADVVVYIGCGERGNEMTEVIEEFPHLEDIRTGNK---LMDRTVLIANTSNMPVAAREASVYTGITIAEYFRDMGYGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYLASRLAQFYERAGRVITLGKDNRQGFVCIVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLQSYSLY 439
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA2_CLOTE (V-type ATP synthase alpha chain 2 OS=Clostridium tetani GN=atpA2 PE=3 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 6.631e-90 Identity = 165/265 (62.26%), Postives = 201/265 (75.85%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFI 793 VRTPRP+ ++L+ PL+TGQR+LD FP GGT AIPG FG GKT+ L+K+S++D +VY+GCGERGNEM EVL DFP+L + S+M RT L+ANTSNMPVAAREASIYTGITIAEY+RDMGY+V++MADSTSRWAEALREISGRL EMPA+ GYPAYL +R+A FYERAG V+ L E GSVT++GAVSP G DFS+PVT T V F GLD+KLA +H+P++NWL SYS+Y+ L +Y E D I Sbjct: 198 VRTPRPIKNRLSLGKPLITGQRILDMFFPIAKGGTVAIPGGFGTGKTMTQHQLAKWSDADIIVYIGCGERGNEMTEVLEDFPKL---IDPKTNTSLMNRTVLIANTSNMPVAAREASIYTGITIAEYYRDMGYDVAIMADSTSRWAEALREISGRLEEMPAEEGYPAYLPSRIAEFYERAGYVENLNDTE--GSVTVIGAVSPAGADFSEPVTQNTKRFVGAFLGLDRKLAYARHYPAINWLTSYSQYNVMLTDWYLENISEDII 457
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_NATPD (V-type ATP synthase alpha chain OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=atpA PE=3 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 4.298e-89 Identity = 161/258 (62.40%), Postives = 197/258 (76.36%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR PRP K TPL++GQRVLD LFP GGT AIPG FG GKTV L+K++++D VVYVGCGERGNEM EV+ DFP+L + +M RT L+ANTSNMPVAARE+ +YTGITIAEY+RDMGY+V++MADSTSRWAEA+REIS RL EMP + GYPAYLAARL+ FYERAGK + + G E GS++++GAVSPPGGDFS+PVT TL IV+ FW LD LA+R+HFPS+NW SYS Y L+ ++ + Sbjct: 198 VREPRPTVEKETPTTPLVSGQRVLDGLFPIAKGGTAAIPGPFGSGKTVTQHQLAKWADADIVVYVGCGERGNEMTEVIEDFPELE---DPKTGKPLMSRTCLIANTSNMPVAARESCVYTGITIAEYYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGKFQNMNGSE--GSISVIGAVSPPGGDFSEPVTQNTLRIVKCFWALDADLAERRHFPSINWNESYSLYKEQLDPWWRE 450
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_NITMS (V-type ATP synthase alpha chain OS=Nitrosopumilus maritimus (strain SCM1) GN=atpA PE=3 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.633e-88 Identity = 159/267 (59.55%), Postives = 204/267 (76.40%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGRE-ESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFIN 796 VR PRP ++ PLLTGQRV+D FP GGT +IPGAFG GKTV ++K+++S VVY+GCGERGNEM EVL++FP L D R + +M RT LVANTSNMPVAAREASIYTG+TIAEY+RDMG +V ++ADSTSRWAEALRE+SGRL EMPA+ GYP+YLA+RLA FYERAG+V+ G P+R GSVT++GAVSP GGDF++PVT+ T+ ++ FW LD KLA +H+PS+NW+ SYS Y + ++ E + D+++ Sbjct: 195 VRKPRPYKNRYDPTVPLLTGQRVIDTFFPIAKGGTGSIPGAFGTGKTVTLHQIAKWADSQVVVYIGCGERGNEMTEVLVEFPHLK----DPRSGKPLMDRTVLVANTSNMPVAAREASIYTGVTIAEYYRDMGKDVVLVADSTSRWAEALREMSGRLEEMPAEEGYPSYLASRLAEFYERAGRVRAAGSPDRDGSVTLIGAVSPSGGDFTEPVTTHTMRFIKTFWALDAKLAYSRHYPSINWMNSYSGYLADIAKWWGENINEDWLS 457
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_METTH (V-type ATP synthase alpha chain OS=Methanobacterium thermoautotrophicum GN=atpA PE=3 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.633e-88 Identity = 160/264 (60.61%), Postives = 197/264 (74.62%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDF 790 VR RP KL D PL+TGQR D F GGT AIPG FG GKTV Q L+K++++D +VYVGCGERGNEM EVL +FP+L +M RT L+ANTSNMPVAAREA +YTGITIAEYFRDMGY+V++MADSTSRWAEA+REISGRL EMP + GYPAYLA+RLA FYERAG+V +G ++ SV++VGAVSPPGGD S+PVT TL I +VFW LD LA ++HFPS++WL SYS Y +++ ++ DP++ Sbjct: 194 VRKGRPYKKKLDPDVPLVTGQRAQDTFFSVAKGGTAAIPGPFGSGKTVTQQQLAKWADADIIVYVGCGERGNEMTEVLKEFPELE---DPKTGNPLMDRTVLIANTSNMPVAAREACVYTGITIAEYFRDMGYDVALMADSTSRWAEAMREISGRLEEMPGEEGYPAYLASRLAQFYERAGRVTTIGSEDKIASVSVVGAVSPPGGDLSEPVTQNTLRICKVFWALDASLADKRHFPSIDWLQSYSLYIDSVQEWWASNVDPEW 454
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_METST (V-type ATP synthase alpha chain OS=Methanosphaera stadtmanae (strain DSM 3091) GN=atpA PE=3 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.633e-88 Identity = 159/256 (62.11%), Postives = 194/256 (75.78%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY 769 VR RP ++KL D PL+TGQR D F GGT A+PG FG GKTV Q L+K++++D VVY+GCGERGNEM EVL +FP+L +M RT L+ANTSNMPVAAREA +YTGITIAEYFRDMGY+V++MADSTSRWAEA+RE+SGRL EMP + GYPAYLA+RLA FYERAG+V +G + SVT+VGAVSPPGGD S+PVT TL I +VFW LD LA R+HFPS+NWL SYS Y ++ +++ Sbjct: 193 VRVGRPYTNKLDPDVPLITGQRAQDTFFCVAKGGTSAMPGPFGSGKTVTQQQLAKWADADIVVYIGCGERGNEMTEVLTEFPELE---DPKTGNPLMDRTVLIANTSNMPVAAREACVYTGITIAEYFRDMGYDVALMADSTSRWAEAMRELSGRLEEMPGEEGYPAYLASRLAQFYERAGRVTTIGSHKAEASVTVVGAVSPPGGDLSEPVTQNTLRIAKVFWALDASLADRRHFPSINWLNSYSLYVDSITNWW 445
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_CENSY (V-type ATP synthase alpha chain OS=Cenarchaeum symbiosum GN=atpA PE=3 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 2.133e-88 Identity = 159/266 (59.77%), Postives = 201/266 (75.56%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFIN 796 VR PR +K PL+TGQRV+D FP GGT +IPG FG GKTV ++K+++S VVY+GCGERGNEM EVL++FP L D + +M RT LVANTSNMPVAAREASIYTG+TIAEY+RDMG +V ++ADSTSRWAEALRE+SGRL EMPA+ GYP+YLA+RLA FYERAG+V+ LG PER GSVT+VGAVSP GGDF++PVT+ T+ ++ FW LD KLA +H+PS+NW+ SYS Y + ++ E D+++ Sbjct: 195 VRQPRSYHTKYDPTVPLITGQRVIDTFFPIAKGGTGSIPGGFGTGKTVTLHQIAKWADSQVVVYIGCGERGNEMTEVLVEFPHLKDPRTD---KPLMDRTVLVANTSNMPVAAREASIYTGVTIAEYYRDMGKDVVLVADSTSRWAEALREMSGRLEEMPAEEGYPSYLASRLAEFYERAGRVRALGSPERNGSVTLVGAVSPSGGDFTEPVTTHTMRFIKTFWALDAKLAYSRHYPSINWMNSYSGYLADIAKWWGENVSKDWLD 457
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_METVS (V-type ATP synthase alpha chain OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=atpA PE=3 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.786e-88 Identity = 163/258 (63.18%), Postives = 193/258 (74.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR PRP KL PLLTGQRV D F GG AIPG FG GKTV L+K+S+ D VVY+GCGERGNEM EV+ +FP L + G + +M RT L+ANTSNMPVAAREAS+YTGITIAEYFRD G V + ADSTSRWAEA+REISGRL EMP + GYPAYL+++LA FYERAG+V CLG +R G V IVGAVSPPGGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y + ++++ Sbjct: 193 VRKPRPSKVKLPPVIPLLTGQRVEDTFFGLAKGGASAIPGPFGSGKTVTQHQLAKWSDVDVVVYIGCGERGNEMTEVIEEFPHLD-DIKTGNK--LMDRTVLIANTSNMPVAAREASVYTGITIAEYFRDQGLGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYLSSKLAQFYERAGRVDCLGSEDRQGFVCIVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYINDIAGWWKK 447
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_METMP (V-type ATP synthase alpha chain OS=Methanococcus maripaludis GN=atpA PE=3 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.786e-88 Identity = 162/258 (62.79%), Postives = 193/258 (74.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR PRP K A PL+TGQRV D F GG AIPG FG GKTV L+K+S+ D VVY+GCGERGNEM EV+ +FP L + G + +M RT L+ANTSNMPVAAREAS+YTGITIAEYFRD G V + ADSTSRWAEA+REISGRL EMP + GYPAYL+++LA FYERAG+V+CLG + G V IVGAVSPPGGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y + +++Q Sbjct: 193 VRKPRPSKGKQAPVIPLITGQRVEDTFFGLAKGGASAIPGPFGSGKTVTQHQLAKWSDVDVVVYIGCGERGNEMTEVIEEFPHLD-DIKTGNK--LMDRTVLIANTSNMPVAAREASVYTGITIAEYFRDQGLGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYLSSKLAQFYERAGRVECLGSENKQGFVCIVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQ 447
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_METM7 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=atpA PE=3 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.786e-88 Identity = 162/258 (62.79%), Postives = 193/258 (74.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR PRP K A PL+TGQRV D F GG AIPG FG GKTV L+K+S+ D VVY+GCGERGNEM EV+ +FP L + G + +M RT L+ANTSNMPVAAREAS+YTGITIAEYFRD G V + ADSTSRWAEA+REISGRL EMP + GYPAYL+++LA FYERAG+V+CLG + G V IVGAVSPPGGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y + +++Q Sbjct: 193 VRKPRPSKGKQAPVIPLITGQRVEDTFFGLAKGGASAIPGPFGSGKTVTQHQLAKWSDVDVVVYIGCGERGNEMTEVIEEFPHLD-DIKTGNK--LMDRTVLIANTSNMPVAAREASVYTGITIAEYFRDQGLGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYLSSKLAQFYERAGRVECLGSENKQGFVCIVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQ 447 The following BLAST results are available for this feature:
BLAST of FC873260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873260 ID=FC873260; Name=FC873260; organism=Citrus clementina; type=EST; length=798bpback to top |