FC873260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_METM6 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=atpA PE=3 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.786e-88 Identity = 162/258 (62.79%), Postives = 193/258 (74.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR PRP K A PL+TGQRV D F GG AIPG FG GKTV L+K+S+ D VVY+GCGERGNEM EV+ +FP L + G + +M RT L+ANTSNMPVAAREAS+YTGITIAEYFRD G V + ADSTSRWAEA+REISGRL EMP + GYPAYL+++LA FYERAG+V+CLG + G V IVGAVSPPGGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y + +++Q Sbjct: 193 VRKPRPSKGKQAPVIPLITGQRVEDTFFGLAKGGASAIPGPFGSGKTVTQHQLAKWSDVDVVVYIGCGERGNEMTEVIEEFPHLD-DIKTGNK--LMDRTVLIANTSNMPVAAREASVYTGITIAEYFRDQGLGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYLSSKLAQFYERAGRVECLGSENKQGFVCIVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQ 447
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_HALSA (V-type ATP synthase alpha chain OS=Halobacterium salinarium GN=atpA PE=1 SV=1) HSP 1 Score: 324.709 bits (831), Expect = 3.638e-88 Identity = 160/257 (62.26%), Postives = 198/257 (77.04%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREES-VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY 769 VR RP K PL++GQR+LD LFP GGT AIPG FG GKTV Q+L+K++++D VVY+GCGERGNEM EV+ DFP+L PD + + +M RTTL+ANTSNMPVAARE+ IYTGITIAEY+RDMGY+V++MADSTSRWAEA+REIS RL EMP + GYPAYLAARL+ FYERAG + G E GS++++GAVSPPGGDFS+PVT TL IV+ FW LD LA+R+HFP++NW SYS Y L+ ++ Sbjct: 196 VRRQRPTVDKQTPTEPLVSGQRILDGLFPIAKGGTAAIPGPFGSGKTVTQQSLAKFADADIVVYIGCGERGNEMTEVIEDFPEL----PDPQTGNPLMARTTLIANTSNMPVAARESCIYTGITIAEYYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGYFENFNGTE--GSISVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDSDLAERRHFPAINWDESYSLYKDQLDPWF 446
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_HALS3 (V-type ATP synthase alpha chain OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=atpA PE=3 SV=1) HSP 1 Score: 324.709 bits (831), Expect = 3.638e-88 Identity = 160/257 (62.26%), Postives = 198/257 (77.04%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREES-VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY 769 VR RP K PL++GQR+LD LFP GGT AIPG FG GKTV Q+L+K++++D VVY+GCGERGNEM EV+ DFP+L PD + + +M RTTL+ANTSNMPVAARE+ IYTGITIAEY+RDMGY+V++MADSTSRWAEA+REIS RL EMP + GYPAYLAARL+ FYERAG + G E GS++++GAVSPPGGDFS+PVT TL IV+ FW LD LA+R+HFP++NW SYS Y L+ ++ Sbjct: 196 VRRQRPTVDKQTPTEPLVSGQRILDGLFPIAKGGTAAIPGPFGSGKTVTQQSLAKFADADIVVYIGCGERGNEMTEVIEDFPEL----PDPQTGNPLMARTTLIANTSNMPVAARESCIYTGITIAEYYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGYFENFNGTE--GSISVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDSDLAERRHFPAINWDESYSLYKDQLDPWF 446
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_HALWD (V-type ATP synthase alpha chain OS=Haloquadratum walsbyi (strain DSM 16790) GN=atpA PE=3 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 1.059e-87 Identity = 158/258 (61.24%), Postives = 195/258 (75.58%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR PRP K PL++GQR+LD LFP GGT AIPG FG GKTV L+KY+++D ++YVGCGERGNEM EV+ DFP+L +M RT+L+ANTSNMPVAARE+ +YTGITIAE++RDMGY+V++MADSTSRWAEA+REIS RL EMP + GYPAYLAARLA FYERAG + + G E GSV+ +GAVSPPGGDFS+PVT TL IV+ FW LD LA+R+HFPS+NW SYS Y L+ ++++ Sbjct: 198 VREPRPTVEKKTPREPLVSGQRILDGLFPIAKGGTAAIPGPFGSGKTVTQHQLAKYADADIIIYVGCGERGNEMTEVIDDFPELE---DPSTGNPLMARTSLIANTSNMPVAARESCVYTGITIAEFYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLAQFYERAGYFENVNGTE--GSVSAIGAVSPPGGDFSEPVTQNTLRIVKTFWALDADLAERRHFPSINWDESYSLYKEQLDPWFQE 450
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_METM5 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=atpA PE=3 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.383e-87 Identity = 160/258 (62.02%), Postives = 193/258 (74.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR PRP K PL+TGQRV D F GG AIPG FG GKTV L+K+S+ D VVY+GCGERGNEM EV+ +FP L + G + +M RT L+ANTSNMPVAAREAS+YTGITIAEYFRD G V + ADSTSRWAEA+REISGRL EMP + GYPAYL+++LA FYERAG+V+CLG ++ G V IVGAVSPPGGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y + ++++ Sbjct: 193 VRKPRPSKGKQPPVIPLITGQRVEDTFFGVAKGGAAAIPGPFGSGKTVTQHQLAKWSDVDVVVYIGCGERGNEMTEVIEEFPHLD-DIKTGNK--LMDRTVLIANTSNMPVAAREASVYTGITIAEYFRDQGLGVLLTADSTSRWAEAMREISGRLEEMPGEEGYPAYLSSKLAQFYERAGRVQCLGSEDKHGFVCIVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQE 447
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_HALMA (V-type ATP synthase alpha chain OS=Haloarcula marismortui GN=atpA PE=3 SV=1) HSP 1 Score: 322.013 bits (824), Expect = 2.358e-87 Identity = 160/257 (62.26%), Postives = 194/257 (75.49%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE 772 VR RP K PL++GQRVLD LFP GGT AIPG FG GKTV L+K++++D VVYVGCGERGNEM EV+ DFP+L ++M RT L+ANTSNMPVAARE+ +YTGITIAEYFRDMGY+V++MADSTSRWAEA+REIS RL EMP + GYPAYL+ARL+ FYERAG + + G E GSV+++GAVSPPGGDFS+PVT TL IV+ FW LD LA+R+HFPS+NW SYS Y L+ ++E Sbjct: 199 VRQQRPTVEKETPTEPLISGQRVLDGLFPIAKGGTAAIPGPFGSGKTVTQHQLAKWADADIVVYVGCGERGNEMTEVIEDFPELEDPTTGN---ALMDRTCLIANTSNMPVAARESCVYTGITIAEYFRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLSARLSEFYERAGYFENINGTE--GSVSVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDADLAERRHFPSINWNESYSLYRDQLDPWFE 450
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_HALVO (V-type ATP synthase alpha chain OS=Halobacterium volcanii GN=atpA PE=1 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 8.962e-87 Identity = 162/264 (61.36%), Postives = 194/264 (73.48%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFI 793 VR RP + K PL++GQR+LD LFP GGT AIPG FG GKTV L+K++++D VVYVGCGERGNEM EV+ DFP+L +M RT L+ANTSNMPVAARE+ IYTGITIAEY+RDMGY+V++MADSTSRWAEA+REIS RL EMP + GYPAYLAARL+ FYERAG + G E GSV+++GAVSPPGGDFS+PVT TL IV+ FW LD LA+R+HFP++NW SYS Y EQ DP F+ Sbjct: 199 VRQARPAAEKKTPREPLVSGQRILDGLFPIAKGGTAAIPGPFGSGKTVTQHQLAKWADADIVVYVGCGERGNEMTEVIEDFPELD---DPKTGNPLMARTCLIANTSNMPVAARESCIYTGITIAEYYRDMGYDVALMADSTSRWAEAMREISSRLEEMPGEEGYPAYLAARLSEFYERAGYFTTVNGEE--GSVSVIGAVSPPGGDFSEPVTQNTLRIVKTFWALDADLAERRHFPAINWNESYSLYQ-------EQLDPWFV 450
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_METS5 (V-type ATP synthase alpha chain OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=atpA PE=3 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 2.607e-86 Identity = 155/264 (58.71%), Postives = 198/264 (75.00%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDF 790 VR PRP KL PLLTG R+LD +FP GGT AIPG FG GKTV Q+LSK+S + V++VGCGERGNEM + L FP+L GR +++RT +VANTSNMPVAAREASIY G+T+AEYFRD GY+V +ADSTSRWAEALR++ GR+ EMPA+ G+P+YL++R+A +YERAG+V+ LG PER GSVT+ AVSPPGGDF++PVTS TL V+VFW LD LAQ +H+P++NWL +S Y + ++ + DPD+ Sbjct: 194 VRVPRPFKEKLDPSQPLLTGVRILDTIFPIAKGGTAAIPGPFGSGKTVTLQSLSKWSEAKIVIFVGCGERGNEMTDELRSFPKLKDPWT-GRP--LLERTVMVANTSNMPVAAREASIYVGVTLAEYFRDQGYDVLTVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLSSRIAEYYERAGRVRTLGNPERYGSVTLASAVSPPGGDFTEPVTSTTLRFVRVFWPLDVSLAQARHYPAINWLQGFSSYVDLVSDWWIKNVDPDW 454
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_METS3 (V-type ATP synthase alpha chain OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=atpA PE=3 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 3.405e-86 Identity = 155/258 (60.08%), Postives = 189/258 (73.26%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR RP KL D PL+TGQR D F GG AIPG FG GKTV Q L+K++++D V+Y+GCGERGNEM EVL +FP L +M RT L+ANTSNMPVAAREA +YTGITIAEY+RD GY+V++MADSTSRWAEA+REISGRL EMP + GYPAYLA+RLA FYERAG+V +G S+T+VGAVSPPGGD S+PVT TL I +VFW LD LA ++HFPS++WL SYS Y ++E ++ + Sbjct: 194 VRKGRPYVDKLDPDVPLVTGQRAQDTFFSVAKGGAAAIPGPFGSGKTVTQQQLAKWADADIVIYIGCGERGNEMTEVLTEFPYLD---DPKTGNPLMDRTVLIANTSNMPVAAREACVYTGITIAEYYRDQGYDVALMADSTSRWAEAMREISGRLEEMPGEEGYPAYLASRLAQFYERAGRVNTIGTTSDVASITVVGAVSPPGGDLSEPVTQNTLRICKVFWALDASLADKRHFPSIDWLQSYSLYVDSIEGWWAE 448
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_IGNH4 (V-type ATP synthase alpha chain OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=atpA PE=3 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 3.405e-86 Identity = 158/262 (60.31%), Postives = 196/262 (74.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDP 784 +R PRPV K TPL+TG RVLD LFP GGT AIPG FG GKTV + L+ +S++ V+YVGCGERGNEM +VL++FP GR +M+RT LVANTSNMPVAAREASIY G+T+AEY+RDMGY+ ++ADSTSRWAEALR+I+GR+ EMPA+ G+P YLA+RLA +YERAG+ + G PER GSVTI AVSPPGGDFS+PVTS T V+VFW LD LA +H+P++NWL+SYS Y T + ++E P Sbjct: 202 IRRPRPVKEKFEPVTPLITGVRVLDTLFPMAKGGTGAIPGPFGSGKTVTLRTLAAWSDAKVVIYVGCGERGNEMTDVLVNFPHYKDPW-SGRP--LMERTILVANTSNMPVAAREASIYVGVTLAEYYRDMGYDSLLIADSTSRWAEALRDIAGRMEEMPAEEGFPPYLASRLAEYYERAGRARIPGRPERVGSVTIASAVSPPGGDFSEPVTSHTRRFVRVFWALDASLAYARHYPAINWLVSYSLYVDTVAKWWHENISP 460 The following BLAST results are available for this feature:
BLAST of FC873260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873260 ID=FC873260; Name=FC873260; organism=Citrus clementina; type=EST; length=798bpback to top |