FC873260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_THEPD (V-type ATP synthase alpha chain OS=Thermofilum pendens (strain Hrk 5) GN=atpA PE=3 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 4.448e-86 Identity = 152/264 (57.58%), Postives = 200/264 (75.76%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDF 790 VR PRP +L ++ PLL GQR++D FP GG AIPG FG GKTV +S YS+S VVY+GCGERGNE+AE+L +FP L + GR +++R+ ++ANTSNMPV+AREASIY G+TIAEY+RD GY+V+++ADSTSRWAEALREI+GRL E+P + GYPAYL ++A FYER G+VK LG PER+GSVT++GAVSPPGGD+++PVT TL V W LD LA R+HFP++NWL S+S+Y+ +E ++ + P+F Sbjct: 196 VRQPRPYKERLPSEVPLLIGQRIIDTFFPIAKGGAGAIPGGFGTGKTVTLHKVSMYSDSQIVVYIGCGERGNEIAEMLKEFPVL-VDPKSGRP--IIERSIIIANTSNMPVSAREASIYMGVTIAEYYRDQGYDVTLIADSTSRWAEALREIAGRLGELPVERGYPAYLPDKIAEFYERGGRVKALGSPERSGSVTVLGAVSPPGGDYNEPVTIHTLRFVGTMWALDTDLAYRRHFPAINWLKSFSQYADIIERWWVKNVSPEF 456
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_SULSO (V-type ATP synthase alpha chain OS=Sulfolobus solfataricus GN=atpA PE=3 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 2.883e-85 Identity = 155/248 (62.50%), Postives = 188/248 (75.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY 745 VR PRP KL PLLTG RVLD +FP GGT AIPG FG GKTV Q+L+K+S + V+YVGCGERGNEM + L FP L GR +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+ ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+ AVSPPGGDF++PVTS TL V+VFW LD LAQ +H+P++NWL +S Y Sbjct: 194 VRIPRPFKEKLEPTEPLLTGTRVLDTIFPIAKGGTAAIPGPFGSGKTVTLQSLAKWSAAKIVIYVGCGERGNEMTDELRQFPSLKDPWT-GRP--LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTIGNPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAY 438
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_STAMF (V-type ATP synthase alpha chain OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=atpA PE=3 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 2.883e-85 Identity = 159/265 (60.00%), Postives = 196/265 (73.96%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGRE-ESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDF 790 VR PRP KL P+LTGQRV+D FP GG AIPG FG GKTV Q L+K+S D +YVGCGERGNEMA+ L F +L D R +++++R+ +ANTSNMPVAARE SI+ G TI EYFRDMGY+V M+ADSTSRWAEA+REISGRL E+P + GYPAYL +RLASFYER+G VK LG P+RTGS+TI+GAVSPPG DFS+PVT ATL IV+ + LD LA R+H+P++NWLISYS Y + +++ DP + Sbjct: 192 VRKPRPYREKLEHREPVLTGQRVIDFFFPLAKGGKAAIPGGFGTGKTVTLQQLTKWSAVDIAIYVGCGERGNEMADALHSFRRLV----DPRTGKALVERSVFIANTSNMPVAARETSIFLGATIGEYFRDMGYHVLMVADSTSRWAEAMREISGRLEELPGEEGYPAYLGSRLASFYERSGYVKTLGRPDRTGSLTIMGAVSPPGADFSEPVTQATLRIVRALYALDVNLAYRRHYPAINWLISYSLYVDNVTDWWHKNIDPSW 452
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_SULIM (V-type ATP synthase alpha chain OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=atpA PE=3 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 6.422e-85 Identity = 155/248 (62.50%), Postives = 188/248 (75.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY 745 VR PRP KL PLLTG RVLD +FP GGT AIPG FG GKTV Q+L+K+S + V+YVGCGERGNEM + L FP L GR +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+ ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+ AVSPPGGDF++PVTS TL V+VFW LD LAQ +H+P++NWL +S Y Sbjct: 194 VRIPRPFKEKLEPTEPLLTGTRVLDTIFPIAKGGTAAIPGPFGSGKTVTLQSLAKWSAAKIVIYVGCGERGNEMTDELRQFPSLKDPWT-GRP--LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTVGKPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAY 438
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_SULIK (V-type ATP synthase alpha chain OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=atpA PE=3 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 6.422e-85 Identity = 155/248 (62.50%), Postives = 188/248 (75.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY 745 VR PRP KL PLLTG RVLD +FP GGT AIPG FG GKTV Q+L+K+S + V+YVGCGERGNEM + L FP L GR +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+ ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+ AVSPPGGDF++PVTS TL V+VFW LD LAQ +H+P++NWL +S Y Sbjct: 194 VRIPRPFKEKLEPTEPLLTGTRVLDTIFPIAKGGTAAIPGPFGSGKTVTLQSLAKWSAAKIVIYVGCGERGNEMTDELRQFPSLKDPWT-GRP--LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTVGKPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAY 438
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_SULIA (V-type ATP synthase alpha chain OS=Sulfolobus islandicus (strain M.16.27) GN=atpA PE=3 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 6.422e-85 Identity = 155/248 (62.50%), Postives = 188/248 (75.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY 745 VR PRP KL PLLTG RVLD +FP GGT AIPG FG GKTV Q+L+K+S + V+YVGCGERGNEM + L FP L GR +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+ ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+ AVSPPGGDF++PVTS TL V+VFW LD LAQ +H+P++NWL +S Y Sbjct: 194 VRIPRPFKEKLEPTEPLLTGTRVLDTIFPIAKGGTAAIPGPFGSGKTVTLQSLAKWSAAKIVIYVGCGERGNEMTDELRQFPSLKDPWT-GRP--LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTVGKPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAY 438
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_SULIY (V-type ATP synthase alpha chain OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=atpA PE=3 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 8.388e-85 Identity = 155/248 (62.50%), Postives = 188/248 (75.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY 745 VR PRP KL PLLTG RVLD +FP GGT AIPG FG GKTV Q+L+K+S + V+YVGCGERGNEM + L FP L GR +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+ ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+ AVSPPGGDF++PVTS TL V+VFW LD LAQ +H+P++NWL +S Y Sbjct: 194 VRIPRPFREKLEPTEPLLTGTRVLDTIFPIAKGGTAAIPGPFGSGKTVTLQSLAKWSAAKIVIYVGCGERGNEMTDELRQFPSLKDPWT-GRP--LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTVGKPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAY 438
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_SULIN (V-type ATP synthase alpha chain OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=atpA PE=3 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 8.388e-85 Identity = 155/248 (62.50%), Postives = 188/248 (75.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY 745 VR PRP KL PLLTG RVLD +FP GGT AIPG FG GKTV Q+L+K+S + V+YVGCGERGNEM + L FP L GR +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+ ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+ AVSPPGGDF++PVTS TL V+VFW LD LAQ +H+P++NWL +S Y Sbjct: 194 VRIPRPFREKLEPTEPLLTGTRVLDTIFPIAKGGTAAIPGPFGSGKTVTLQSLAKWSAAKIVIYVGCGERGNEMTDELRQFPSLKDPWT-GRP--LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTVGKPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAY 438
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_SULIL (V-type ATP synthase alpha chain OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=atpA PE=3 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 8.388e-85 Identity = 155/248 (62.50%), Postives = 188/248 (75.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY 745 VR PRP KL PLLTG RVLD +FP GGT AIPG FG GKTV Q+L+K+S + V+YVGCGERGNEM + L FP L GR +++RT LVANTSNMPVAAREASIY GIT+AEYFRD GY+ ++ADSTSRWAEALR++ GR+ EMPA+ G+P+YL +RLA +YERAG+VK +G PER GSVT+ AVSPPGGDF++PVTS TL V+VFW LD LAQ +H+P++NWL +S Y Sbjct: 194 VRIPRPFREKLEPTEPLLTGTRVLDTIFPIAKGGTAAIPGPFGSGKTVTLQSLAKWSAAKIVIYVGCGERGNEMTDELRQFPSLKDPWT-GRP--LLERTILVANTSNMPVAAREASIYVGITMAEYFRDQGYDTLLVADSTSRWAEALRDLGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVKTVGKPERFGSVTVASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAY 438
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_SULAC (V-type ATP synthase alpha chain OS=Sulfolobus acidocaldarius GN=atpA PE=3 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 8.388e-85 Identity = 152/258 (58.91%), Postives = 193/258 (74.81%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR PRP KL PLLTG RV+D +FP GGT AIPG FG GKTV Q+L+K+S + V+YVGCGERGNEM + L FP+L + +++RT LVANTSNMPVAARE+SIY G+T+AEYFRD GY+V ++ADSTSRWAEALRE+ GR+ EMPA+ G+P+YL +RLA +YERAG+V LG PER GSV+I AVSPPGGDF++PVTS TL V+VFW LD LAQ +H+P++NW+ +S Y + S++ + Sbjct: 195 VRIPRPFKEKLEPTEPLLTGTRVVDTIFPIAKGGTAAIPGPFGSGKTVTLQSLAKWSEAKVVIYVGCGERGNEMTDELRQFPKLK---DPWTGKPLLQRTILVANTSNMPVAARESSIYVGVTMAEYFRDQGYDVLLVADSTSRWAEALRELGGRMEEMPAEEGFPSYLPSRLAEYYERAGRVIALGKPERFGSVSIASAVSPPGGDFTEPVTSNTLRFVRVFWPLDVSLAQARHYPAINWIQGFSAYVDLVASWWHK 449 The following BLAST results are available for this feature:
BLAST of FC873260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873260 ID=FC873260; Name=FC873260; organism=Citrus clementina; type=EST; length=798bpback to top |