FC873260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_PYRFU (V-type ATP synthase alpha chain OS=Pyrococcus furiosus GN=atpA PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.434e-76 Identity = 139/218 (63.76%), Postives = 174/218 (79.82%), Query Frame = 2 Query: 140 TVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDF 790 TV L+K+S++ VVY+GCGERGNEM +VL +FP+L + +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPAYLA+RLA FYERAG+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ +++ DP++ Sbjct: 666 TVTQHQLAKWSDAQVVVYIGCGERGNEMTDVLEEFPKLK---DPNTGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASRLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVQDWWHKNVDPEW 880
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_PYRIL (V-type ATP synthase alpha chain OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=atpA PE=3 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 4.172e-76 Identity = 138/264 (52.27%), Postives = 184/264 (69.70%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDF 790 VR PRP KL PL+TG R +D +FP GGT AIPG FG GKTV + LS Y+ S ++ V CGERGNE A+ L +L +++RTT++ NTSNMPVAAREAS+Y G TI EYFRD GY+V ++ADSTSRWAEA+RE++ R+ EMP++ GYPAYL RLA FYERAG+V +G ER GS+TI +VSPPGGDF++PVTS TL + FW L +LA +H+P+++WL+++S+Y +E ++ + PD+ Sbjct: 197 VRRPRPFREKLPPVEPLITGVRTIDTMFPIAKGGTAAIPGPFGSGKTVAIRTLSMYAQSRIIIPVLCGERGNEAADALQGLLKLK---DPNTGRPLLERTTIIVNTSNMPVAAREASVYMGTTIGEYFRDQGYDVLVLADSTSRWAEAMREVALRIGEMPSEEGYPAYLPTRLAEFYERAGRVVLMGSKERIGSLTIAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLLAFSRYVDTVEVWWSKNISPDW 457
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_PYRHO (V-type ATP synthase alpha chain OS=Pyrococcus horikoshii GN=atpA PE=1 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 7.117e-76 Identity = 137/218 (62.84%), Postives = 174/218 (79.82%), Query Frame = 2 Query: 140 TVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDF 790 TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPAYLA++LA FYERAG+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ +++ DP++ Sbjct: 617 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNIDPEW 831
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_PYRAB (V-type ATP synthase alpha chain OS=Pyrococcus abyssi GN=atpA PE=3 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 9.295e-76 Identity = 137/218 (62.84%), Postives = 174/218 (79.82%), Query Frame = 2 Query: 140 TVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDF 790 TV L+K+S++ V+Y+GCGERGNEM +VL +FP+L + +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALREISGRL EMP + GYPAYLA++LA FYERAG+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ +++ DP++ Sbjct: 670 TVTQHQLAKWSDAQVVIYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKLAEFYERAGRVVTLGSDYRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEW 884
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_PYRCJ (V-type ATP synthase alpha chain OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=atpA PE=3 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.214e-75 Identity = 134/258 (51.94%), Postives = 183/258 (70.93%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR PRP KL PL+TG RV+D +FP GGT A+PG FG GKTV+ + LS ++ S ++ V CGERGNE A+ L +L +++RTT++ NTSNMPVAAREAS+Y G T+ EYFRD GY+V ++ADSTSRWAEA+RE++ R+ EMP++ GYPAYL RLA FYERAG+V +G ER GS+TI +VSPPGGDF++PVTS TL + FW L +LA +H+P+++WL+++S+Y +E ++ + Sbjct: 197 VRRPRPFREKLPPVEPLITGVRVIDTMFPIAKGGTAAVPGPFGSGKTVMIRTLSMFAQSRIIIPVLCGERGNEAADALQGLLKLK---DPSTGRPLLERTTIIVNTSNMPVAAREASVYMGTTLGEYFRDQGYDVLVLADSTSRWAEAMREVALRIGEMPSEEGYPAYLPTRLAEFYERAGRVVLIGSGERVGSLTIAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLMAFSRYVDTVEVWWSK 451
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_PYRAE (V-type ATP synthase alpha chain OS=Pyrobaculum aerophilum GN=atpA PE=3 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 4.613e-75 Identity = 133/258 (51.55%), Postives = 181/258 (70.16%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR PRP KL PL+TG R +D +FP GGT A+PG FG GKTV+ + LS ++ S ++ V CGERGNE A+ L +L +++RTT++ NTSNMPVAAREAS+Y G T+ EYFRD GY+V ++ADSTSRWAEA+RE++ R+ EMP++ GYPAYL RLA FYERAG+V G ER GS+TI +VSPPGGDF++PVTS TL + FW L +LA +H+P+++WL+++S+Y +E ++ + Sbjct: 197 VRRPRPFKEKLPPVEPLITGVRTVDTMFPIAKGGTAAVPGPFGSGKTVMIRTLSMFAQSRFIIPVLCGERGNEAADALQGLLKLK---DPSTGRPLLERTTIIVNTSNMPVAAREASVYMGTTLGEYFRDQGYDVLVLADSTSRWAEAMREVALRIGEMPSEEGYPAYLPTRLAEFYERAGRVVLYGSKERVGSLTIAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLVAFSRYVDTVEVWWSK 451
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_THENV (V-type ATP synthase alpha chain OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=atpA PE=3 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 2.290e-74 Identity = 135/258 (52.33%), Postives = 182/258 (70.54%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR PRP KL PL+TG R +D +FP GG A+PG FG GKTV + LS ++ S ++ V CGERGNE A+ L +L GR S+++RTT++ NTSNMPVAAREAS+Y G T+ EYFRD GY+V ++ADSTSRWAEA+RE++ R+ EMP++ GYPAYL RLA FYERAG+V +G ER GS+TI +VSPPGGDF++PVTS TL + FW L +LA +H+P+++WL ++S+Y +E ++ + Sbjct: 197 VRRPRPFREKLPPVEPLITGVRTIDTMFPIAKGGAAAVPGPFGSGKTVTIRTLSMFAQSRFIIPVLCGERGNEAADALHGLLKLKDPTT-GR--SLLERTTIIVNTSNMPVAAREASVYMGTTLGEYFRDQGYDVLVLADSTSRWAEAMREVALRIGEMPSEEGYPAYLPTRLAEFYERAGRVVLIGSKERVGSLTIAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLAAFSRYVDTVEVWWSK 451
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_THEAC (V-type ATP synthase alpha chain OS=Thermoplasma acidophilum GN=atpA PE=2 SV=2) HSP 1 Score: 278.87 bits (712), Expect = 2.290e-74 Identity = 132/212 (62.26%), Postives = 167/212 (78.77%), Query Frame = 2 Query: 140 TVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 TVI L+K+S+++ VVY+GCGERGNEM E+L FP+L + +M RT L+ANTSNMPVAAREASIYTGITIAEY+RDMGY+V++MADSTSRWAEALREISGRL EMP + GYPAYL R++ FYER+G+ + + ER GS+T++GAVSPPGGD S+PV+ TL + +VFW LD LA R+HFPS+NWL SYS Y+ L S+Y++ Sbjct: 410 TVIQHQLAKWSDANIVVYIGCGERGNEMTEILTTFPELK---DPNTGQPLMDRTVLIANTSNMPVAAREASIYTGITIAEYYRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLGRRVSEFYERSGRARLVSPDERYGSITVIGAVSPPGGDISEPVSQNTLRVTRVFWALDAALANRRHFPSINWLNSYSLYTEDLRSWYDK 618
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_PYRAR (V-type ATP synthase alpha chain OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=atpA PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.905e-74 Identity = 132/258 (51.16%), Postives = 180/258 (69.77%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR PRP KL PL+TG R +D +FP GG A+PG FG GKTV+ + LS ++ S ++ V CGERGNE A+ L +L +++RTT++ NTSNMPVAAREAS+Y G T+ EYFRD GY+V ++ADSTSRWAEA+RE++ R+ EMP++ GYPAYL RLA FYERAG+V +G ER GS+TI +VSPPGGDF++PVTS TL + FW L +LA +H+P+++WL ++S+Y +E ++ + Sbjct: 197 VRRPRPFREKLPPVEPLITGVRTVDTMFPIAKGGAAAVPGPFGSGKTVMIRTLSMFAQSRFIIPVLCGERGNEAADALQGLLKLK---DPATGRPLLERTTIIVNTSNMPVAAREASVYMGTTLGEYFRDQGYDVLVLADSTSRWAEAMREVALRIGEMPSEEGYPAYLPTRLAEFYERAGRVVLMGSKERIGSLTIAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLAAFSRYVDTVEVWWSK 451
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_THEVO (V-type ATP synthase alpha chain OS=Thermoplasma volcanium GN=atpA PE=3 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 8.700e-74 Identity = 130/212 (61.32%), Postives = 167/212 (78.77%), Query Frame = 2 Query: 140 TVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 TVI L+K+S+++ VVY+GCGERGNEM E+L FP+L + + +M RT L+ANTSNMPVAAREASIYTGITIAEY+RDMGY+V++MADSTSRWAEALREISGRL EMP + GYPAYL R++ FYER+G+ + + +R GS+T++GAVSPPGGD S+PV+ TL + +VFW LD LA R+HFPS+NWL SYS Y+ L +Y++ Sbjct: 422 TVIQHQLAKWSDANIVVYIGCGERGNEMTEILTTFPELKDPVSG---QPLMDRTVLIANTSNMPVAAREASIYTGITIAEYYRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLGRRISEFYERSGRARLVSPEDRFGSITVIGAVSPPGGDISEPVSQNTLRVTRVFWALDASLANRRHFPSINWLNSYSLYTEDLRHWYDE 630 The following BLAST results are available for this feature:
BLAST of FC873260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC873260 ID=FC873260; Name=FC873260; organism=Citrus clementina; type=EST; length=798bpback to top |