FC873260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: Y4YI_RHISN (Probable ATP synthase y4yI OS=Rhizobium sp. (strain NGR234) GN=NGR_a00640 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.009e-21 Identity = 76/253 (30.04%), Postives = 113/253 (44.66%), Query Frame = 2 Query: 5 RTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES 763 R P P++ ++ + P G R LD L G I G G GK+ + + K + +D V+ GERG E+ E + E ++R +V TS+ R +AEYFR+ G V+++ DS +R+ A+REI E P G+P + A L ERAG LG GS+T V G DP+ + I+ L + LA R HFP+++ L S S+ A+ S Sbjct: 144 RAPNPMTRRMV-ERPFPLGVRALDGLLTCGEGQRIGIYGEPGGGKSTLISQIVKGAAADVVIVALIGERGREVREFVERH----------LGEEGLRRAIVVVETSDRSATERAQCAPMATALAEYFREQGLRVALLLDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFAALPGLLERAG----LG---ERGSITAFYTVLVEGDGTGDPIAEESRGILDGHIVLSRALAARSHFPAIDVLQSRSRVMDAVVS 378
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: FLII_BUCBP (Flagellum-specific ATP synthase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fliI PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.009e-21 Identity = 67/222 (30.18%), Postives = 113/222 (50.90%), Query Frame = 2 Query: 56 TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVN 721 TG R ++ L G + + G GK+V+ +++Y+ +D V+ GERG E+ E F +T E+V+ R+ +++ S V + + IAEYFRD ++V ++ DS +R+A A REIS + E+P GYP + ++L S ERAG G +GS+T V + DP++ + SI+ L ++ A+ H+P++N Sbjct: 161 TGIRSINGLLTIGRGQKIGLFASSGLGKSVLLGMMTRYTQADIVILSLIGERGREVKE----FIDSVLT------ETVLSRSIVISAPSESSVLMQTRGAIYAMRIAEYFRDKNFHVLLIMDSLTRYAMAHREISLSIGELPVSKGYPPSVFSKLFSLIERAG-----NGKINSGSITAFFTVLTEEEERYDPISESARSILDGHIILSREYAESGHYPAIN 367
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: FLII_BACSU (Flagellum-specific ATP synthase OS=Bacillus subtilis GN=fliI PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 5.009e-21 Identity = 79/251 (31.47%), Postives = 111/251 (44.22%), Query Frame = 2 Query: 17 PVSSKLAADTPLL---------TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 PVS++ + P+ G R +D+L G I G GK+ + ++K + +D V GERG E+ E + D +E +KR+ +V TS+ P R + YT IAEYFRD G NV M DS +R A A REI E P GY + A L ER G G++T V G D ++P+ I+ LD+ LA + FP+VN L S S+ Sbjct: 122 PVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGERGREVREFIEK---------DLGKEG-LKRSIVVVATSDQPALMRLKAAYTATAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERT-------GANEHGTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSISR 355
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_SILST (ATP synthase subunit beta OS=Silicibacter sp. (strain TM1040) GN=atpD PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.009e-21 Identity = 74/235 (31.49%), Postives = 113/235 (48.09%), Query Frame = 2 Query: 50 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSK---YSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 L+TG +V+D L P GG + G G GKTV+ L +S V+ G GER E ++ + + + PD EES + LV N P AR TG+T+AE FRD G +V D+ R+ +A E+S L +P+ GY LA + + ER K GS+T + AV P D +DP + T + + L++ +++ +P+V+ L S S+ Sbjct: 128 LVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERTREGNDLYHEMIESNVIKPDNLEES---QVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERITSTK-------NGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSSSR 352
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPA (ATP synthase subunit beta OS=Rhodopseudomonas palustris GN=atpD PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.009e-21 Identity = 72/238 (30.25%), Postives = 116/238 (48.74%), Query Frame = 2 Query: 50 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTA 754 L+TG +V+D L P GG + G G GKTV+ Q L ++ V+ G GER E ++ +F + + G E S + LV N P AR TG+T+AE+FRD G +V D+ R+ +A E+S L +P+ GY LA + + ER GS+T V A+ P D +DP + + + + L++ ++++ +P+V+ L S S+ +A Sbjct: 131 LVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVARAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGGGEGS---KCALVYGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTT-------TKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSA 358
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_RHILW (ATP synthase subunit beta OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=atpD PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.009e-21 Identity = 71/234 (30.34%), Postives = 111/234 (47.44%), Query Frame = 2 Query: 50 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 L+TG +V+D L P GG + G G GKTV+ L ++ V+ G GER E ++ + + + G E S + LV N P AR TG+T+AE+FRD G +V D+ R+ +A E+S L +P+ GY LA + ER TGS+T V A+ P D +DP + + + + L + +A++ +P+V+ L S S+ Sbjct: 135 LVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESNVNKHGGGEGS---KAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERITTT-------TTGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSR 358
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_RHIL3 (ATP synthase subunit beta OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=atpD PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.009e-21 Identity = 71/234 (30.34%), Postives = 111/234 (47.44%), Query Frame = 2 Query: 50 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 L+TG +V+D L P GG + G G GKTV+ L ++ V+ G GER E ++ + + + G E S + LV N P AR TG+T+AE+FRD G +V D+ R+ +A E+S L +P+ GY LA + ER TGS+T V A+ P D +DP + + + + L + +A++ +P+V+ L S S+ Sbjct: 135 LVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESNVNKHGGGEGS---KAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERITTT-------TTGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSR 358
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_MYCS5 (ATP synthase subunit beta OS=Mycoplasma synoviae (strain 53) GN=atpD PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.009e-21 Identity = 74/235 (31.49%), Postives = 111/235 (47.23%), Query Frame = 2 Query: 50 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 L TG +V+D L P GG + G G GKTV+ Q L ++ V+ G GER E ++ + + V+ +T LV N P AR TG+T+AEYFRD +V + D+ R+ +A E+S L +P+ GY LA + + ER R+GS+T V AV P D +DP + T S + LD+ +A +P+++ L S S+ Sbjct: 131 LETGIKVIDLLIPYAKGGKIGLFGGAGVGKTVLVQELINNIATQHNGLSVFTGVGERTREGNDLYYEM----------KAAGVLDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKQNQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERITST-------RSGSITSVQAVYVPADDLTDPAPATTFSHLDAKTVLDRNVAALGIYPAIDPLESSSR 348
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_CAMFF (ATP synthase subunit beta OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=atpD PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.009e-21 Identity = 73/233 (31.33%), Postives = 112/233 (48.07%), Query Frame = 2 Query: 56 TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSK---YSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 TG +V+D L P GG + G G GKTVI L + +S V+ G GER E ++ + +E V+ + L N P AR TG+T+AEYFRD MG +V M D+ R++++ E+S L +P+ GY LA+ + ER K GS+T V AV P D +DP + + + L++ +A++ +P+V+ L S S+ Sbjct: 131 TGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEM----------KESGVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGRLQERITSTK-------KGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSR 346
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB1_PSYIN (ATP synthase subunit beta 1 OS=Psychromonas ingrahamii (strain 37) GN=atpD1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.009e-21 Identity = 74/254 (29.13%), Postives = 121/254 (47.64%), Query Frame = 2 Query: 5 RTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQAL--SKYSNSDTV-VYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTA 754 R P +S + +TG +V+D L P GG + G G GKTV+ + + S+ + + ++ G GER E E+ + +E V+ ++ N P AR + +T+AEYFRD +V ++ D+ R+ +A EISG + +MP+ GY + + L+S ER + G++T + AV P DF+DP T S + L ++ A +PS++ L S SK +TA Sbjct: 119 RAPPTLSQRSTQSEIFVTGIKVIDVLVPLERGGKAGLFGGAGVGKTVLLTEMIHNMVSHHNGISIFCGIGERSREGEELYREM----------KEAGVLPNMVMIFGQMNEPPGARFRVGHAALTMAEYFRDDESRDVLLLIDNIFRFIQAGSEISGLMGQMPSRLGYQPTMGSELSSLEERIANTE-------DGAITSIQAVYVPADDFTDPAAVHTFSHLSASIVLSRQRASEGLYPSIDPLQSSSKMATA 355 The following BLAST results are available for this feature:
BLAST of FC873260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873260 ID=FC873260; Name=FC873260; organism=Citrus clementina; type=EST; length=798bpback to top |