FC873260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: HRPB6_XANEU (Probable ATP synthase hrpB6 OS=Xanthomonas euvesicatoria GN=hrpB6 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.543e-21 Identity = 77/246 (31.30%), Postives = 115/246 (46.75%), Query Frame = 2 Query: 5 RTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 + P P+ +L + P+ TG R++D L G I A G GK+ + ++ + D V V GERG E+ E F +L + DG + R+ +V TS+ R + Y G IAEYFRD G V +M DS +R+A A REI E P G+P + A L ERAG +GS+T V SDP+ I+ L +++A + +P+++ L S S+ Sbjct: 133 QAPDPMRRRLI-EHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMGMFARGTQCDVNVIVLIGERGREVRE----FIELILGA-DG-----LARSVVVCATSDRSSIERAKAAYVGTAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAGM-------GESGSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLSR 360
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_UREPA (ATP synthase subunit beta OS=Ureaplasma parvum GN=atpD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.543e-21 Identity = 78/252 (30.95%), Postives = 116/252 (46.03%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 + P P ++ A +L TG +V+D L P GG + G G GKTV+ Q L ++ V+ G GER E ++ + E V+ +T LV N P AR +G+T+AE FRD G +V + D+ R+ +A E+S L MP+ GY LA + ER K GS+T V AV P D +DP + T S + LD+ +A +P+++ L S S+ Sbjct: 112 IHRPAPSFAEQAESIEILETGIKVVDLLVPFAKGGKIGLFGGAGVGKTVLMQELIHNIAKNHGGLSVFAGVGERTREGNDLYYEMA----------ESDVLDKTALVFGQMNEPPGARMRVALSGLTMAEEFRDAFGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLAFEMGQLQERITSTK-------KGSITSVQAVYVPADDLTDPAPATTFSHLDAKVVLDRAIASLGLYPAISPLQSTSR 346
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_UREP2 (ATP synthase subunit beta OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=atpD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.543e-21 Identity = 78/252 (30.95%), Postives = 116/252 (46.03%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 + P P ++ A +L TG +V+D L P GG + G G GKTV+ Q L ++ V+ G GER E ++ + E V+ +T LV N P AR +G+T+AE FRD G +V + D+ R+ +A E+S L MP+ GY LA + ER K GS+T V AV P D +DP + T S + LD+ +A +P+++ L S S+ Sbjct: 112 IHRPAPSFAEQAESIEILETGIKVVDLLVPFAKGGKIGLFGGAGVGKTVLMQELIHNIAKNHGGLSVFAGVGERTREGNDLYYEMA----------ESDVLDKTALVFGQMNEPPGARMRVALSGLTMAEEFRDAFGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLAFEMGQLQERITSTK-------KGSITSVQAVYVPADDLTDPAPATTFSHLDAKVVLDRAIASLGLYPAISPLQSTSR 346
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_THISH (ATP synthase subunit beta OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=atpD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.543e-21 Identity = 77/251 (30.68%), Postives = 115/251 (45.82%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSK---YSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 + P P + A T LL TG +V+D L P GG + G G GKTV L + +S V+ G GER E + + ++ +V+ + LV N P R TG+T+AE+FRD G +V M D+ R+ A E+S L MP+ GY LA + ER K GS+T + AV P D +DP + T + + L +++A+ +P+V+ L S S+ Sbjct: 108 IHRPAPSFDEQAGSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEM----------KDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTK-------KGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSR 341
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_RUTMC (ATP synthase subunit beta OS=Ruthia magnifica subsp. Calyptogena magnifica GN=atpD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.543e-21 Identity = 76/246 (30.89%), Postives = 117/246 (47.56%), Query Frame = 2 Query: 17 PVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSK---YSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 P +LA LL TG +V+D + P GG + G G GKTV L + +S V+ G GER E + + +E +V+ + +LV N P R TG+T+AEYFRD G++V + D+ R+ A E+S L MP+ GY LA+ + + ER K GS+T + AV P D +DP + T + + L +++A+ +P+V+ L S S+ Sbjct: 113 PAYHELAPAAELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFSGVGERTREGNDFYHEM----------KESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGHDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLASEMGALQERITSTK-------KGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQVAELGIYPAVDPLDSTSR 341
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPS (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisB5) GN=atpD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.543e-21 Identity = 71/239 (29.71%), Postives = 116/239 (48.54%), Query Frame = 2 Query: 50 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTAL 757 L+TG +V+D L P GG + G G GKTV+ Q L ++ V+ G GER E ++ +F + + G E S + LV N P AR +G+T+AE+FRD G +V D+ R+ +A E+S L +P+ GY LA + + ER GS+T V A+ P D +DP + + + + L++ ++++ +P+V+ L S S+ + L Sbjct: 131 LVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGGGEGS---KCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTT-------HKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPL 359
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPB (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisB18) GN=atpD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.543e-21 Identity = 71/239 (29.71%), Postives = 116/239 (48.54%), Query Frame = 2 Query: 50 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTAL 757 L+TG +V+D L P GG + G G GKTV+ Q L ++ V+ G GER E ++ +F + + G E S + LV N P AR +G+T+AE+FRD G +V D+ R+ +A E+S L +P+ GY LA + + ER GS+T V A+ P D +DP + + + + L++ ++++ +P+V+ L S S+ + L Sbjct: 131 LVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGGGEGS---KCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTT-------HKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPL 359
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_RHOP5 (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisA53) GN=atpD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.543e-21 Identity = 71/239 (29.71%), Postives = 116/239 (48.54%), Query Frame = 2 Query: 50 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTAL 757 L+TG +V+D L P GG + G G GKTV+ Q L ++ V+ G GER E ++ +F + + G E S + LV N P AR +G+T+AE+FRD G +V D+ R+ +A E+S L +P+ GY LA + + ER GS+T V A+ P D +DP + + + + L++ ++++ +P+V+ L S S+ + L Sbjct: 131 LVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGGGEGS---KCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTT-------HKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPL 359
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_RHOP2 (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain HaA2) GN=atpD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.543e-21 Identity = 71/239 (29.71%), Postives = 116/239 (48.54%), Query Frame = 2 Query: 50 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTAL 757 L+TG +V+D L P GG + G G GKTV+ Q L ++ V+ G GER E ++ +F + + G E S + LV N P AR +G+T+AE+FRD G +V D+ R+ +A E+S L +P+ GY LA + + ER GS+T V A+ P D +DP + + + + L++ ++++ +P+V+ L S S+ + L Sbjct: 131 LVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGGGEGS---KCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTT-------HKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPL 359
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_OLICO (ATP synthase subunit beta OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=atpD PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.543e-21 Identity = 72/239 (30.13%), Postives = 116/239 (48.54%), Query Frame = 2 Query: 50 LLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTAL 757 L+TG +V+D L P GG + G G GKTV+ Q L ++ V+ G GER E ++ +F + + G E S + LV N P AR TG+T+AE+FRD G +V D+ R+ +A E+S L +P+ GY LA + + ER GS+T V A+ P D +DP + + + + L++ ++++ +P+V+ L S S+ + L Sbjct: 131 LVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGGGEGS---KCALVYGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTT-------TKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPL 359 The following BLAST results are available for this feature:
BLAST of FC873260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873260 ID=FC873260; Name=FC873260; organism=Citrus clementina; type=EST; length=798bpback to top |