FC873260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_FRATN (ATP synthase subunit beta OS=Francisella tularensis subsp. novicida (strain U112) GN=atpD PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.545e-21 Identity = 80/259 (30.89%), Postives = 119/259 (45.95%), Query Frame = 2 Query: 17 PVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD 781 P +LA T +L TG +V+D + P GG + G G GKTV L +S V+ G GER E + + ++ +V+ + +LV N P R +G+TIAE FRD +V M D+ R+ A E+S L MP+ GY LAA + + ER K TGS+T V AV P D +DP + T S + L +++A+ +P+V+ L S S+ L E ++ Sbjct: 113 PAYDELALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGERTREGNDFYYEM----------KDSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQEHYE 354
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_DICNV (ATP synthase subunit beta OS=Dichelobacter nodosus (strain VCS1703A) GN=atpD PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.545e-21 Identity = 76/246 (30.89%), Postives = 113/246 (45.93%), Query Frame = 2 Query: 17 PVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSK---YSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 P +L+ T LL TG +V+D L P GG + G G GKTV L + +S V+ G GER E + + +E V+ + +LV N P R TG+T+AEYFR+ G +V D+ R+ A E+S L MP+ GY LA + ER K GS+T + AV P D +DP + T + + L +++A+ +P+V+ L S S+ Sbjct: 113 PAYDELSNSTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAGVGERTREGNDFYYEM----------KESDVLDKVSLVYGQMNEPAGNRFRVALTGLTMAEYFREEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERIASTK-------KGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRQIAELGIYPAVDPLDSTSR 341
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_UREU1 (ATP synthase subunit beta OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=atpD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.116e-20 Identity = 78/252 (30.95%), Postives = 116/252 (46.03%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRD-MGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 + P P ++ A +L TG +V+D L P GG + G G GKTV+ Q L ++ V+ G GER E ++ + E V+ +T LV N P AR +G+T+AE FRD G +V + D+ R+ +A E+S L MP+ GY LA + ER K GS+T V AV P D +DP + T S + LD+ +A +P+++ L S S+ Sbjct: 112 IHRPAPSFAEQAEAIEILETGIKVVDLLVPFAKGGKIGLFGGAGVGKTVLMQELIHNIAKNHGGLSVFAGVGERTREGNDLYYEMA----------ESDVLDKTALVFGQMNEPPGARMRVALSGLTMAEEFRDAFGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLAFEMGQLQERITSTK-------KGSITSVQAVYVPADDLTDPAPATTFSHLDAKVVLDRAIASLGLYPAISPLQSTSR 346
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_THEM4 (ATP synthase subunit beta OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=atpD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.116e-20 Identity = 77/250 (30.80%), Postives = 115/250 (46.00%), Query Frame = 2 Query: 5 RTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSK---YSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 RTP ++ + + L TG +V+D L P GG G G GKTV+ L + + ++ G GER E E+ +D +E V+ T LV N P AR + +T+AEYFRD+ G +V + D+ R+ +A E+S L MP+ GY LA + ER K GS+T V A+ P D +DP + T + + L ++ A +P+V+ L S SK Sbjct: 117 RTPPSITEQSTSVEILETGIKVIDLLAPFPKGGKIGFFGGAGVGKTVLVMELIRNIAIEHHGFSMFAGVGERTREGNELYLDM----------QEAEVLDNTVLVFGQMNEPPGARFRVALSALTMAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATDMGELQERITSTK-------KGSITSVQAIYVPADDITDPAPATTFTHLDATVVLSRRRAALGLYPAVDPLDSTSK 349
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_FUSNN (ATP synthase subunit beta OS=Fusobacterium nucleatum subsp. nucleatum GN=atpD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.116e-20 Identity = 78/247 (31.58%), Postives = 116/247 (46.96%), Query Frame = 2 Query: 17 PVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 P L +T + TG +V+D L P + GG + G G GKTV+ L + V+ G GER E ++ + ++T E V+ +T LV N P AR TG+T+AE FRD G +V + D+ R+ +A E+S L +P+ GY LA + + ER K +GS+T V AV P D +DP + T S + L + +A +P+V+ L S SK Sbjct: 114 PEFDDLETETEIFETGIKVIDLLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDL---YGEMT-------ESGVITKTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPNLATEMGALQERITSTK-------SGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLSRNIASLGIYPAVDPLDSTSK 343
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_FRATW (ATP synthase subunit beta OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=atpD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.116e-20 Identity = 78/246 (31.71%), Postives = 115/246 (46.75%), Query Frame = 2 Query: 17 PVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 P +LA T +L TG +V+D + P GG + G G GKTV L +S V+ G GER E + + ++ +V+ + +LV N P R +G+TIAE FRD +V M D+ R+ A E+S L MP+ GY LAA + + ER K TGS+T V AV P D +DP + T S + L +++A+ +P+V+ L S S+ Sbjct: 113 PAYDELALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGERTREGNDFYYEM----------KDSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSR 341
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_FRATT (ATP synthase subunit beta OS=Francisella tularensis subsp. tularensis GN=atpD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.116e-20 Identity = 78/246 (31.71%), Postives = 115/246 (46.75%), Query Frame = 2 Query: 17 PVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 P +LA T +L TG +V+D + P GG + G G GKTV L +S V+ G GER E + + ++ +V+ + +LV N P R +G+TIAE FRD +V M D+ R+ A E+S L MP+ GY LAA + + ER K TGS+T V AV P D +DP + T S + L +++A+ +P+V+ L S S+ Sbjct: 113 PAYDELALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGERTREGNDFYYEM----------KDSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSR 341
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_FRATM (ATP synthase subunit beta OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=atpD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.116e-20 Identity = 78/246 (31.71%), Postives = 115/246 (46.75%), Query Frame = 2 Query: 17 PVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 P +LA T +L TG +V+D + P GG + G G GKTV L +S V+ G GER E + + ++ +V+ + +LV N P R +G+TIAE FRD +V M D+ R+ A E+S L MP+ GY LAA + + ER K TGS+T V AV P D +DP + T S + L +++A+ +P+V+ L S S+ Sbjct: 113 PAYDELALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGERTREGNDFYYEM----------KDSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSR 341
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_FRAT1 (ATP synthase subunit beta OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=atpD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.116e-20 Identity = 78/246 (31.71%), Postives = 115/246 (46.75%), Query Frame = 2 Query: 17 PVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSK 742 P +LA T +L TG +V+D + P GG + G G GKTV L +S V+ G GER E + + ++ +V+ + +LV N P R +G+TIAE FRD +V M D+ R+ A E+S L MP+ GY LAA + + ER K TGS+T V AV P D +DP + T S + L +++A+ +P+V+ L S S+ Sbjct: 113 PAYDELALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGERTREGNDFYYEM----------KDSNVLDKVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSR 341
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: ATPB_FRAP2 (ATP synthase subunit beta OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=atpD PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.116e-20 Identity = 79/259 (30.50%), Postives = 119/259 (45.95%), Query Frame = 2 Query: 17 PVSSKLAADTPLL-TGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKY---SNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFD 781 P +LA T +L TG +V+D + P GG + G G GKTV L +S V+ G GER E + + ++ +V+ + LV N P R +G+TIAE FRD +V M D+ R+ A E+S L MP+ GY LAA + + ER K TGS+T V AV P D +DP + T S + L +++A+ +P+V+ L S S+ L ++ ++ Sbjct: 113 PAYDELALSTEILETGIKVVDLICPFAKGGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAGVGERTREGNDFYYEM----------KDSNVLDKVALVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAAEMGALQERITSTK-------TGSITSVQAVYVPADDLTDPSPATTFSHLDATIVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGHDHYE 354 The following BLAST results are available for this feature:
BLAST of FC873260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873260 ID=FC873260; Name=FC873260; organism=Citrus clementina; type=EST; length=798bpback to top |