FC873260
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_CLOBL (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=atpA PE=3 SV=2) HSP 1 Score: 332.798 bits (852), Expect = 1.336e-90 Identity = 161/258 (62.40%), Postives = 196/258 (75.97%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR RP KL P++TGQRV+D FP GGT +PG FG GKTV+ L+K++++ VVY+GCGERGNEM +VL +FP+L E +MKRT L+ANTSNMPVAAREASIYTGITI EYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R A FYERAGKV LG R G++T++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y + + ++ Sbjct: 192 VRRGRPYGRKLNPVEPMITGQRVIDTFFPVTKGGTACVPGPFGSGKTVVQHQLAKWADAQIVVYIGCGERGNEMTDVLNEFPELK---DPKTGEPLMKRTVLIANTSNMPVAAREASIYTGITIGEYFRDMGYSVALMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRAADFYERAGKVLSLGSEGREGALTVIGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDE 446
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_CLOBK (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Okra / Type B1) GN=atpA PE=3 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 1.336e-90 Identity = 161/258 (62.40%), Postives = 196/258 (75.97%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR RP KL P++TGQRV+D FP GGT +PG FG GKTV+ L+K++++ VVY+GCGERGNEM +VL +FP+L E +MKRT L+ANTSNMPVAAREASIYTGITI EYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R A FYERAGKV LG R G++T++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y + + ++ Sbjct: 194 VRRGRPYGRKLNPVEPMITGQRVIDTFFPVTKGGTACVPGPFGSGKTVVQHQLAKWADAQIVVYIGCGERGNEMTDVLNEFPELK---DPKTGEPLMKRTVLIANTSNMPVAAREASIYTGITIGEYFRDMGYSVALMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRAADFYERAGKVLSLGSEGREGALTVIGAVSPPGGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLEKISPWMDE 448
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA2_METHJ (V-type ATP synthase alpha chain 2 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpA2 PE=3 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 1.336e-90 Identity = 162/259 (62.55%), Postives = 199/259 (76.83%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREE-SVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR RP +L + PLLTGQRV D +FP V GGT IPG FG GKTV Q L+K++++ VVY+GCGERGNEM +VL +FP+LT D R +++RT ++ANTSNMPVAAREASIYTGITIAEY+RDMG +V+++ADSTSRW EALRE+SGRL EMP + GYPAYLA RLA+FYERAG+V C G E+TGSVTI+GAVSPPGGDFS+P+T TL I FW LD LA R+H+PSVNW+ SYS Y +E ++ + Sbjct: 188 VRKGRPFVKRLDPEVPLLTGQRVFDTMFPLVKGGTAMIPGGFGTGKTVSEQTLAKWADTQVVVYIGCGERGNEMTDVLTEFPELT----DPRTGYPLIERTIMIANTSNMPVAAREASIYTGITIAEYYRDMGMDVALLADSTSRWGEALREVSGRLEEMPGEEGYPAYLATRLAAFYERAGRVICAGSEEKTGSVTIIGAVSPPGGDFSEPITQNTLRIAGTFWALDANLAYRRHYPSVNWIRSYSLYLEDVEDWFSE 442
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_METLZ (V-type ATP synthase alpha chain OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=atpA PE=3 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 1.745e-90 Identity = 165/264 (62.50%), Postives = 203/264 (76.89%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDF 790 VR PRP K + PLLTGQR+LD LFP GGT AIPG FG GKTV Q L+K+S+++ VVY+GCGERGNEM EVL +FP+L S+M+RT L+ANTSNMPVAAREAS+YTGIT+AEYFRDMGY+V++MADSTSRWAEA+REI RL EMP + GYPAYL++RL+ FYERAG V+ L G +GSV+++GAVSP GGDFS+PVT TL IV+VFW LD L++R+HFP++NWL SYS Y L +Y E+ PD+ Sbjct: 193 VRVPRPYVEKHSPSIPLLTGQRILDGLFPIAKGGTAAIPGPFGSGKTVTQQQLAKWSDAEIVVYIGCGERGNEMTEVLTEFPELQ---DPKTGNSLMERTILIANTSNMPVAAREASVYTGITLAEYFRDMGYDVALMADSTSRWAEAMREICSRLEEMPGEEGYPAYLSSRLSEFYERAGLVEPLAG--GSGSVSVIGAVSPAGGDFSEPVTQNTLRIVKVFWALDANLSRRRHFPAINWLQSYSLYMAQLNDYYDEKVSPDW 451
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_CLOBH (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=atpA PE=3 SV=2) HSP 1 Score: 332.413 bits (851), Expect = 1.745e-90 Identity = 159/258 (61.63%), Postives = 196/258 (75.97%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR RP KL P++TGQRV+D FP GGT +PG FG GKTV+ L+K++++ VVY+GCGERGNEM +VL +FP+L E +MKRT L+ANTSNMPVAAREASIYTGITI EYFRDMGY++++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R A FYERAG V +G ER G++T++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y + + ++ Sbjct: 192 VRRGRPYGRKLNPAQPMITGQRVIDTFFPVTKGGTACVPGPFGSGKTVVQHQLAKWADAQIVVYIGCGERGNEMTDVLNEFPELK---DPKTGEPLMKRTVLIANTSNMPVAAREASIYTGITIGEYFRDMGYSIALMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRAAEFYERAGNVVSIGSEEREGALTVIGAVSPPGGDLSEPVTQATLRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYIEKISPWMDE 446
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_CLOB1 (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=atpA PE=3 SV=2) HSP 1 Score: 332.413 bits (851), Expect = 1.745e-90 Identity = 159/258 (61.63%), Postives = 196/258 (75.97%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ 775 VR RP KL P++TGQRV+D FP GGT +PG FG GKTV+ L+K++++ VVY+GCGERGNEM +VL +FP+L E +MKRT L+ANTSNMPVAAREASIYTGITI EYFRDMGY++++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R A FYERAG V +G ER G++T++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y + + ++ Sbjct: 192 VRRGRPYGRKLNPAQPMITGQRVIDTFFPVTKGGTACVPGPFGSGKTVVQHQLAKWADAQIVVYIGCGERGNEMTDVLNEFPELK---DPKTGEPLMKRTVLIANTSNMPVAAREASIYTGITIGEYFRDMGYSIALMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRAAEFYERAGNVVSIGSEEREGALTVIGAVSPPGGDLSEPVTQATLRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYIEKISPWMDE 446
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_HYPBU (V-type ATP synthase alpha chain OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=atpA PE=3 SV=1) HSP 1 Score: 332.028 bits (850), Expect = 2.279e-90 Identity = 163/265 (61.51%), Postives = 204/265 (76.98%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFI 793 VR RP+ KL PL+TG RV+D +FP GGT AIPG FG GKTV Q+L+K+S + V+Y+GCGERGNEM EVL FP+LT + +M+RT L+ANTSNMPVAAREASIYTGIT+AEY+RDMGY+V ++ADSTSRWAEALREI+GRL EMPA+ GYP+YLA+RLA FY RAG+VK G PER GSVTIVGAVSPPGGDF++PVT+ T ++VFW LD +LA +H+P++NWL+SYS Y T + ++E P ++ Sbjct: 197 VRRARPIIEKLEPVEPLITGMRVIDTMFPMAKGGTGAIPGPFGSGKTVTLQSLAKWSAAKVVIYIGCGERGNEMTEVLETFPKLT---DPWTGKPMMERTILIANTSNMPVAAREASIYTGITLAEYYRDMGYDVLLVADSTSRWAEALREIAGRLEEMPAEEGYPSYLASRLAEFYARAGRVKVPGRPERLGSVTIVGAVSPPGGDFTEPVTANTKRFIRVFWALDARLAYSRHYPAINWLVSYSAYVETVAKWWHENISPKWL 458
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_THEGJ (V-type ATP synthase alpha chain OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=atpA PE=3 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 2.976e-90 Identity = 161/264 (60.98%), Postives = 202/264 (76.52%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDF 790 VR RP +KL + PL+TGQR +D F GGT AIPG FG GKTV L+K+S++ VVY+GCGERGNEM +VL +FP+L + +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRD GY+V++MADSTSRWAEALREISGRL EMP + GYPAYLA+++A FYERAG+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y A++ +++ DP++ Sbjct: 192 VRVKRPYKNKLPPEVPLITGQRTIDTFFSIAKGGTAAIPGPFGSGKTVTQHQLAKWSDAQVVVYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRDQGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKIAEFYERAGRVVTLGSEPRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYLDAVQDWWHKNVDPEW 452
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_METTP (V-type ATP synthase alpha chain OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=atpA PE=3 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 5.077e-90 Identity = 169/265 (63.77%), Postives = 201/265 (75.85%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGR-EESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDF 790 VR RPV KL PL TGQRV+D FP GGT AIPG FG GKTV+ Q LSK+S+ D V+YVGCGERGNEMA++L +FP+L D R +++R+ + ANTSNMPVAAREASIYTG+T AEY+RDMGY+V M ADSTSRWAEA+RE++ RL EMP + GYPAYLAARLA FYERAG+ + L G E GSV +VGAVSPPGGDF++PVT TL IV+VFW LD +L QR+HFPS+NWL SYS Y LES+Y E PD+ Sbjct: 189 VRQARPVVRKLPPTIPLRTGQRVIDGFFPLAKGGTAAIPGGFGTGKTVMQQTLSKWSDVDIVIYVGCGERGNEMADLLHEFPELV----DPRTNRPLLERSIVYANTSNMPVAAREASIYTGMTTAEYYRDMGYDVLMTADSTSRWAEAMRELASRLEEMPGEEGYPAYLAARLADFYERAGRAEVLAGGE--GSVAVVGAVSPPGGDFTEPVTQNTLRIVKVFWALDSRLTQRRHFPSINWLDSYSLYEKDLESWYAENVAPDW 447
BLAST of FC873260 vs. ExPASy Swiss-Prot
Match: VATA_DESSY (V-type ATP synthase alpha chain OS=Desulfurococcus sp. (strain SY) GN=atpA PE=3 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 5.077e-90 Identity = 160/264 (60.61%), Postives = 202/264 (76.52%), Query Frame = 2 Query: 2 VRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDF 790 VR RP +KL + PL+TGQR +D F GGT AIPG FG GKTV L+K+S++ VVY+GCGERGNEM +VL +FP+L + +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRD GY+V++MADSTSRWAEALREISGRL EMP + GYPAYLA+++A FYERAG+V LG R GSV+++GAVSPPGGDFS+PV TL +V+VFW LD LA+R+HFP++NWL SYS Y +++ +++ DP++ Sbjct: 192 VRVKRPYKNKLPPEVPLITGQRTIDTFFSIAKGGTAAIPGPFGSGKTVTQHQLAKWSDAQVVVYIGCGERGNEMTDVLEEFPKLK---DPKTGKPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRDQGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASKIAEFYERAGRVVTLGSEPRVGSVSVIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYLDSIQDWWHKNVDPEW 452 The following BLAST results are available for this feature:
BLAST of FC873260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC873260 ID=FC873260; Name=FC873260; organism=Citrus clementina; type=EST; length=798bpback to top |