FC873262

Overview
NameFC873262
Unique NameFC873262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHOPA (3-demethylubiquinone-9 3-methyltransferase OS=Rhodopseudomonas palustris GN=ubiG PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 7.320e-27
Identity = 53/118 (44.92%), Postives = 78/118 (66.10%), Query Frame = 2
Query:   32 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            ++ + +FD V+A EVIEHV D   F    +AL    G  V++T+NR+ +++A AI+ AE+++ WLP+GTHQW  F+TP EL   L R  + V E +G V+NPL  RW LS D+ VN++
Sbjct:  129 IDPRERFDIVLAMEVIEHVTDVGAFLSRCAALMKPTGIMVVATLNRNWKSFALAIVGAEYVMRWLPRGTHQWDKFVTPAELEQHLNRLKLIVTEQSGLVFNPLADRWKLSPDMDVNYM 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_CAUSK (3-demethylubiquinone-9 3-methyltransferase OS=Caulobacter sp. (strain K31) GN=ubiG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.320e-27
Identity = 56/125 (44.80%), Postives = 77/125 (61.60%), Query Frame = 2
Query:   29 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 403
            L E    FD V+  EV+EHVADP EF ++ + L    G  +++T+NR+++A A A I AE++L W+P GTH W  FL P+EL   L    +DV    G  YNPLTGRWS S D  +N++   TK+
Sbjct:  128 LAEGAGPFDVVLTMEVVEHVADPGEFLRTCAKLLAPGGLMIVATLNRTLKALALAKIGAEYVLRWVPPGTHDWKQFLKPDELRAFLAGEPVDVHGPFGVAYNPLTGRWSRSADCDINYMMTVTKD 252          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_METS4 (3-demethylubiquinone-9 3-methyltransferase OS=Methylobacterium sp. (strain 4-46) GN=ubiG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 9.561e-27
Identity = 54/121 (44.63%), Postives = 80/121 (66.12%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E +V    +FD V+A EV+EHVAD A F ++  A     G    +TINR++R++A AI+ AE++L WLP+GTH W  F+TPEEL   ++   + V +  G VY+PL+GRWS + D +VN++
Sbjct:  121 ESVVAAGERFDLVVAMEVVEHVADMASFVRTACAAVRPGGLFFAATINRTMRSFALAIVGAEYVLGWLPRGTHDWEKFVTPEELARAVESGGLVVADTTGVVYHPLSGRWSAARDTAVNYM 241          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RICAH (3-demethylubiquinone-9 3-methyltransferase OS=Rickettsia akari (strain Hartford) GN=ubiG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.130e-26
Identity = 60/136 (44.12%), Postives = 84/136 (61.76%), Query Frame = 2
Query:    2 INIIPWTEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTKNS 406
            IN +  T + +E  + +D VI  EVIEHV +  +F  +L       G  +ISTINR+ +AYA  II AE+IL W+PK TH ++ FL P E+  +L    I++KE+ G VY+P    W LSDDI VN F+  G+KN+
Sbjct:  102 INYLQSTIEELESDKLYDVVICIEVIEHVGNVQQFILNLVKHIKPNGMAIISTINRTKKAYALGIIVAEYILGWVPKNTHDYTKFLKPSEIYEMLTDTDIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGSKNA 237          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHOS5 (3-demethylubiquinone-9 3-methyltransferase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=ubiG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.130e-26
Identity = 55/122 (45.08%), Postives = 81/122 (66.39%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 385
            E L     +FD V+  EV+EHVADP  +  +   L    G  V ST+NR+ +++A AI+ AE I+ WLPKGTH WS F+TP+EL  ++++A +D  +  G V+NP++  WSLSD D+SVN++
Sbjct:  119 EDLAAAGERFDVVLNMEVVEHVADPLAYLTACRELLKPGGLMVCSTLNRNPKSFAMAIVGAEWIMRWLPKGTHDWSKFITPDELYDLIRKAGLDPVDRKGMVFNPVSWSWSLSDRDLSVNYV 240          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHORT (3-demethylubiquinone-9 3-methyltransferase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=ubiG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.745e-26
Identity = 54/126 (42.86%), Postives = 80/126 (63.49%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E LV E + FDAV+  EV+EHVAD   F  S+  L    GA   +T+NR++++ A A + AE++L WLP+GTH W  F+ P EL   L+ A + V  +AG  ++P +G WS + D+SVN++ F T+
Sbjct:  121 EDLVAEGKTFDAVLTMEVVEHVADVRLFLDSVGQLCRPGGAVGAATLNRTLKSLALAKVGAEYVLRWLPRGTHDWRKFMKPSELTAGLREAGLSVDAIAGMTFDPFSGTWSQTTDVSVNYMLFATR 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PARL1 (3-demethylubiquinone-9 3-methyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=ubiG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.745e-26
Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E L      FD ++  EVIEHVADP  F K  +++    G   I+T+NR+++A+A AI+ AE++L WLP+GTH W  F+T  E+   +  A + +KE+ G  YNPLT +WSLS D  VN++A   +
Sbjct:  125 EALAAAGETFDVILNMEVIEHVADPMAFLKDCASMLRPGGLMFIATLNRTLKAHAFAIVGAEYVLGWLPRGTHDWKKFITVNEMETGIADAGLRLKELTGVSYNPLTDKWSLSRDTDVNYMALAER 250          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_METNO (3-demethylubiquinone-9 3-methyltransferase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=ubiG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.745e-26
Identity = 53/121 (43.80%), Postives = 78/121 (64.46%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E +VE   +FD V+A EV+EHV D   F ++  A     G    +T+NR++R++A AI+ AE++L WLP+GTH W  F+TP EL   ++ A + V +  G VYNPL GRW++S D  VN++
Sbjct:  121 EAVVEAGERFDVVLAMEVVEHVVDMPAFVRTACAAVKPGGLFFAATLNRTMRSFALAIVGAEYVLGWLPRGTHDWEKFVTPAELTGAVESAGLTVIDTTGVVYNPLGGRWAMSRDTGVNYM 241          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BRAJA (3-demethylubiquinone-9 3-methyltransferase OS=Bradyrhizobium japonicum GN=ubiG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.745e-26
Identity = 50/122 (40.98%), Postives = 81/122 (66.39%), Query Frame = 2
Query:   20 TEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            T + ++ + +FD V+A EV+EHV D   F K  +A+    G  V+ST+NR+ +++A AI+ AE++L WLP+GTH+W+ F+TP+EL   L    + + E  G VY+P   +W+LS D+ VN++
Sbjct:  125 TVEEIDPRERFDIVLAMEVVEHVVDVGVFLKRCAAMLKPNGLMVVSTLNRNWKSFALAIVGAEYVLRWLPRGTHEWNKFVTPDELTKYLLDNRLVITEQTGVVYSPFADKWTLSSDMDVNYM 246          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_RHOPS (3-demethylubiquinone-9 3-methyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=ubiG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.197e-26
Identity = 53/122 (43.44%), Postives = 81/122 (66.39%), Query Frame = 2
Query:   20 TEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            T + ++ + +FD V+A EVIEHV D   F    +AL    G  +++T+NR+ +++A AI+ AE+++ WLP+GTHQW  F+TP+EL   LQ   + V E +G V+NPL  RW LS D+ VN++
Sbjct:  125 TVEEIDPRERFDIVMAMEVIEHVNDVPAFLGRCAALMKPTGIMLVATLNRNWKSFALAIVGAEYVMRWLPRGTHQWDKFVTPDELEQHLQGLGLVVTEQSGLVFNPLADRWRLSPDMDVNYM 246          
The following BLAST results are available for this feature:
BLAST of FC873262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBIG_RHOPA7.320e-2744.923-demethylubiquinone-9 3-methyltransferase OS=Rhod... [more]
UBIG_CAUSK7.320e-2744.803-demethylubiquinone-9 3-methyltransferase OS=Caul... [more]
UBIG_METS49.561e-2744.633-demethylubiquinone-9 3-methyltransferase OS=Meth... [more]
UBIG_RICAH2.130e-2644.123-demethylubiquinone-9 3-methyltransferase OS=Rick... [more]
UBIG_RHOS52.130e-2645.083-demethylubiquinone-9 3-methyltransferase OS=Rhod... [more]
UBIG_RHORT4.745e-2642.863-demethylubiquinone-9 3-methyltransferase OS=Rhod... [more]
UBIG_PARL14.745e-2642.863-demethylubiquinone-9 3-methyltransferase OS=Parv... [more]
UBIG_METNO4.745e-2643.803-demethylubiquinone-9 3-methyltransferase OS=Meth... [more]
UBIG_BRAJA4.745e-2640.983-demethylubiquinone-9 3-methyltransferase OS=Brad... [more]
UBIG_RHOPS6.197e-2643.443-demethylubiquinone-9 3-methyltransferase OS=Rhod... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA01FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873262 ID=FC873262; Name=FC873262; organism=Citrus clementina; type=EST; length=507bp
CATAAATATAATTCCATGGACAGAGAAGCTCGTAGAGGAACAGAGGAAGT
TCGATGCTGTGATTGCTTCAGAGGTAATTGAGCATGTAGCAGATCCTGCT
GAATTCTGCAAGTCTTTGTCTGCATTAACCGTATCTGAGGGAGCTACAGT
GATTTCAACAATAAATCGTTCTGTGAGAGCATATGCAACTGCCATCATTG
CAGCAGAACACATCCTCCATTGGCTTCCAAAAGGTACACATCAGTGGTCA
AGTTTCCTTACTCCCGAAGAGCTCGTGCTAATTCTACAACGTGCTTCCAT
AGATGTTAAAGAGATGGCTGGATTTGTGTACAATCCTTTAACAGGAAGAT
GGTCTCTATCCGATGACATTAGTGTGAACTTCATCGCTTTTGGTACCAAA
AATAGCTAGTAACAGATAAACTCTTCTGTAGTAACACTCTCTCTAATGCA
GCTAATGCTGTGTAATAAATTTTGCTCCCAATCATTTAAAAAAAAAAAAA
AAAAAAA
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