FC873262

Overview
NameFC873262
Unique NameFC873262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PSEPK (3-demethylubiquinone-9 3-methyltransferase OS=Pseudomonas putida (strain KT2440) GN=ubiG PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.746e-20
Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 2
Query:   23 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+IL  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct:  104 EALAEEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLLAIVGAEYILKMLPRGTHDFKKFIRPSELGAWSRDAGLQVKDIIGLTYNPLTKHYKLNSDVDVNYM 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PSEPG (3-demethylubiquinone-9 3-methyltransferase OS=Pseudomonas putida (strain GB-1) GN=ubiG PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.746e-20
Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 2
Query:   23 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+IL  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct:  104 EALAEEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLLAIVGAEYILKMLPRGTHDFKKFIRPSELGAWSRDAGLQVKDIIGLTYNPLTKHYKLNSDVDVNYM 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PSEP1 (3-demethylubiquinone-9 3-methyltransferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ubiG PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.746e-20
Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 2
Query:   23 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+IL  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct:  104 EALAEEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLLAIVGAEYILKMLPRGTHDFKKFIRPSELGAWSRDAGLQVKDIIGLTYNPLTKHYKLNSDVDVNYM 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_AGRT5 (3-demethylubiquinone-9 3-methyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ubiG PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.746e-20
Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E+L E    FD ++  EV+EHVA+   F  + + +    G    +TINR+++A A AI AAE++L WLP+GTHQ+   + PEEL   +  + +D+    G  YN L  RW+LS D+ VN++
Sbjct:  121 EQLQEAGESFDVILNMEVVEHVANVDLFVTTCAKMVRPGGLMFAATINRTLKARALAIFAAENVLRWLPRGTHQYEKLVRPEELERPIVASGMDIIHRTGVFYNVLQDRWNLSPDMEVNYM 241          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PSEFS (3-demethylubiquinone-9 3-methyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=ubiG PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.281e-20
Identity = 49/122 (40.16%), Postives = 73/122 (59.84%), Query Frame = 2
Query:   23 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+I+  LP+GTH +  F+ P EL    ++A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct:  104 EALAEEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGAEYIMKLLPRGTHDFKKFIRPSELGAWSRQAGLTVKDIIGLTYNPLTKHYKLASDVDVNYM 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_NITOC (3-demethylubiquinone-9 3-methyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=ubiG PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.281e-20
Identity = 50/127 (39.37%), Postives = 74/127 (58.27%), Query Frame = 2
Query:   23 EKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E+L E +   FD +   E++EHV  PA    +   L    G    ST+NR+ +AY  A+I AE+ L  LPKGTH +  F+ P EL    ++  I+++ + G  YNPLT R+ L  DI+VN++A+G K
Sbjct:  108 ERLAETKAGSFDVITNLEMLEHVPYPASVVAACGQLLKPGGKVFFSTLNRTPKAYLFAVIGAEYALRLLPKGTHDYHRFIRPAELETWCRKGGIELQNLTGLHYNPLTQRYRLGKDINVNYLAYGAK 234          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_HAES1 (3-demethylubiquinone-9 3-methyltransferase OS=Haemophilus somnus (strain 129Pt) GN=ubiG PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.979e-20
Identity = 46/114 (40.35%), Postives = 70/114 (61.40%), Query Frame = 2
Query:   47 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            KFD +   E++EHV DP    +S  AL    G    STIN + +A+A  ++ AE+IL  LPKGTH +  F+ P EL+    +A++  K + G+ YN LTG++ L+ D+S N++A
Sbjct:  118 KFDVITCMEMLEHVPDPLSIIQSCRALLKPNGVLFFSTINHTFKAWALVVLGAEYILKMLPKGTHDYDKFIKPAELLHWTDQANLVCKNICGYHYNLLTGKFWLNQDVSANYMA 231          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_COXBU (3-demethylubiquinone-9 3-methyltransferase OS=Coxiella burnetii GN=ubiG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.891e-20
Identity = 45/122 (36.89%), Postives = 73/122 (59.84%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            E L ++ ++FD +   E++EHV DP    K+ +AL    G    STINR+ +AY   I+ AE++ + LPKGTH ++ F+ P EL    +   + + ++ G  Y+PL   + LS D+SVN++A
Sbjct:  108 EILTKDAQRFDIITCMELLEHVPDPQRMIKNCAALIKPGGKLFFSTINRNFKAYLYTIVGAEYVFNLLPKGTHDYAQFIRPSELTQWAESGGLRLLDITGIHYHPLKNEFDLSRDVSVNYLA 229          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_COXBR (3-demethylubiquinone-9 3-methyltransferase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=ubiG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.891e-20
Identity = 45/122 (36.89%), Postives = 73/122 (59.84%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            E L ++ ++FD +   E++EHV DP    K+ +AL    G    STINR+ +AY   I+ AE++ + LPKGTH ++ F+ P EL    +   + + ++ G  Y+PL   + LS D+SVN++A
Sbjct:  108 EILTKDAQRFDIITCMELLEHVPDPQRMIKNCAALIKPGGKLFFSTINRNFKAYLYTIVGAEYVFNLLPKGTHDYAQFIRPSELTQWAESGGLRLLDITGIHYHPLKNEFDLSRDVSVNYLA 229          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_COXB2 (3-demethylubiquinone-9 3-methyltransferase OS=Coxiella burnetii (strain CbuG_Q212) GN=ubiG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.891e-20
Identity = 45/122 (36.89%), Postives = 73/122 (59.84%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            E L ++ ++FD +   E++EHV DP    K+ +AL    G    STINR+ +AY   I+ AE++ + LPKGTH ++ F+ P EL    +   + + ++ G  Y+PL   + LS D+SVN++A
Sbjct:  108 EILTKDAQRFDIITCMELLEHVPDPQRMIKNCAALIKPGGKLFFSTINRNFKAYLYTIVGAEYVFNLLPKGTHDYAQFIRPSELTQWAESGGLRLLDITGIHYHPLKNEFDLSRDVSVNYLA 229          
The following BLAST results are available for this feature:
BLAST of FC873262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBIG_PSEPK1.746e-2040.163-demethylubiquinone-9 3-methyltransferase OS=Pseu... [more]
UBIG_PSEPG1.746e-2040.163-demethylubiquinone-9 3-methyltransferase OS=Pseu... [more]
UBIG_PSEP11.746e-2040.163-demethylubiquinone-9 3-methyltransferase OS=Pseu... [more]
UBIG_AGRT51.746e-2039.673-demethylubiquinone-9 3-methyltransferase OS=Agro... [more]
UBIG_PSEFS2.281e-2040.163-demethylubiquinone-9 3-methyltransferase OS=Pseu... [more]
UBIG_NITOC2.281e-2039.373-demethylubiquinone-9 3-methyltransferase OS=Nitr... [more]
UBIG_HAES12.979e-2040.353-demethylubiquinone-9 3-methyltransferase OS=Haem... [more]
UBIG_COXBU3.891e-2036.893-demethylubiquinone-9 3-methyltransferase OS=Coxi... [more]
UBIG_COXBR3.891e-2036.893-demethylubiquinone-9 3-methyltransferase OS=Coxi... [more]
UBIG_COXB23.891e-2036.893-demethylubiquinone-9 3-methyltransferase OS=Coxi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA01FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873262 ID=FC873262; Name=FC873262; organism=Citrus clementina; type=EST; length=507bp
CATAAATATAATTCCATGGACAGAGAAGCTCGTAGAGGAACAGAGGAAGT
TCGATGCTGTGATTGCTTCAGAGGTAATTGAGCATGTAGCAGATCCTGCT
GAATTCTGCAAGTCTTTGTCTGCATTAACCGTATCTGAGGGAGCTACAGT
GATTTCAACAATAAATCGTTCTGTGAGAGCATATGCAACTGCCATCATTG
CAGCAGAACACATCCTCCATTGGCTTCCAAAAGGTACACATCAGTGGTCA
AGTTTCCTTACTCCCGAAGAGCTCGTGCTAATTCTACAACGTGCTTCCAT
AGATGTTAAAGAGATGGCTGGATTTGTGTACAATCCTTTAACAGGAAGAT
GGTCTCTATCCGATGACATTAGTGTGAACTTCATCGCTTTTGGTACCAAA
AATAGCTAGTAACAGATAAACTCTTCTGTAGTAACACTCTCTCTAATGCA
GCTAATGCTGTGTAATAAATTTTGCTCCCAATCATTTAAAAAAAAAAAAA
AAAAAAA
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