FC873262

Overview
NameFC873262
Unique NameFC873262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_COXB1 (3-demethylubiquinone-9 3-methyltransferase OS=Coxiella burnetii (strain CbuK_Q154) GN=ubiG PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.891e-20
Identity = 45/122 (36.89%), Postives = 73/122 (59.84%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            E L ++ ++FD +   E++EHV DP    K+ +AL    G    STINR+ +AY   I+ AE++ + LPKGTH ++ F+ P EL    +   + + ++ G  Y+PL   + LS D+SVN++A
Sbjct:  108 EILTKDAQRFDIITCMELLEHVPDPQRMIKNCAALIKPGGKLFFSTINRNFKAYLYTIVGAEYVFNLLPKGTHDYAQFIRPSELTQWAESGGLRLLDITGIHYHPLKNEFDLSRDVSVNYLA 229          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PSEF5 (3-demethylubiquinone-9 3-methyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ubiG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.081e-20
Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 2
Query:   23 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct:  104 EALAEEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGAEYIMKLLPRGTHDFKKFIRPSELGAWSRSAGLTVKDIIGLTYNPLTKHYKLAPDVDVNYM 225          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_NITEU (3-demethylubiquinone-9 3-methyltransferase OS=Nitrosomonas europaea GN=ubiG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.081e-20
Identity = 48/117 (41.03%), Postives = 71/117 (60.68%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E  R +D V   E++EHV DPA   +S + L  S G    ST+NR+ ++Y  AII AE+IL  LP+GTH+++ F+ P EL  + + A +    + G  YNP+T  ++L  D SVN+I
Sbjct:  114 ERPRYYDVVTCMEMLEHVPDPASVIQSCARLVKSGGWVFFSTLNRNPKSYLYAIIGAEYILRLLPRGTHEYAKFIKPSELAHMARSAGLMESGIVGMTYNPITKVYALEADTSVNYI 230          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_NEIMA (3-demethylubiquinone-9 3-methyltransferase OS=Neisseria meningitidis serogroup A GN=ubiG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.081e-20
Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = 2
Query:   23 EKLVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE++L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct:  110 EDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIVPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 231          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_COXBN (3-demethylubiquinone-9 3-methyltransferase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ubiG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.081e-20
Identity = 45/122 (36.89%), Postives = 73/122 (59.84%), Query Frame = 2
Query:   23 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 388
            E L ++ ++FD +   E++EHV DP    K+ +AL    G    STINR+ +AY   I+ AE++ + LPKGTH ++ F+ P EL    +   + + ++ G  Y+PL   + LS D+SVN++A
Sbjct:  108 EILTKDAQRFDIITCMELLEHVPDPQRMIKNCAALIKPGGKLFFSTINRNFKAYLYTIVGAEYVFNLLPKGTHDYAQFIHPSELTQWAESGGLRLLDITGIHYHPLKNEFDLSRDVSVNYLA 229          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_XANAC (3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas axonopodis pv. citri GN=ubiG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.636e-20
Identity = 45/122 (36.89%), Postives = 72/122 (59.02%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E+   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  A+A A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS    VN++A+  K
Sbjct:  117 EQAGSFDAVTCMEMLEHVPDPTAIIRACASLLKPGGKLFLSTLNRTPAAFALAVVGAEYIARLLPKGTHHYKDFIKPAELAAWLRNAGLQLEDVSGMLYEPWRNRARLSSRTEVNYLAYAVK 238          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_NEIMB (3-demethylubiquinone-9 3-methyltransferase OS=Neisseria meningitidis serogroup B GN=ubiG PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 6.636e-20
Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = 2
Query:   23 EKLVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE++L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct:  110 EDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFSTINKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 231          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_NEIM0 (3-demethylubiquinone-9 3-methyltransferase OS=Neisseria meningitidis serogroup C (strain 053442) GN=ubiG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.636e-20
Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = 2
Query:   23 EKLVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E L E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE++L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct:  110 EDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFSTINKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 231          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_MARMM (3-demethylubiquinone-9 3-methyltransferase OS=Maricaulis maris (strain MCS10) GN=ubiG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.636e-20
Identity = 46/127 (36.22%), Postives = 78/127 (61.42%), Query Frame = 2
Query:   23 EKLVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E+L+E+ +  FD V+  EV+EHVA+P  F    + L    G  + +TINR+ +A+A AI+ AE ++ WLP+GTH++   + P ++   L+   + ++   G  YNPLT ++SL +D +VN++    K
Sbjct:  125 EQLIEQDEAPFDVVLNLEVMEHVANPHTFLVDCARLVKPGGLMICATINRTSKAFALAIVGAEWVMGWLPRGTHRFHKLVKPSQIRTALREGGMSLRAPVGVSYNPLTDQFSLGEDTAVNYMMVAEK 251          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_PSEU2 (3-demethylubiquinone-9 3-methyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ubiG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 8.667e-20
Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = 2
Query:   23 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E + EE   ++D V   E++EHV DP+   ++   +    G    STINR+ +AY  A++ AE+IL+ LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct:  104 EDMAEEMPEQYDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVVGAEYILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDVIGLTYNPLTKHYKLTSDVGVNYM 225          
The following BLAST results are available for this feature:
BLAST of FC873262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBIG_COXB13.891e-2036.893-demethylubiquinone-9 3-methyltransferase OS=Coxi... [more]
UBIG_PSEF55.081e-2040.163-demethylubiquinone-9 3-methyltransferase OS=Pseu... [more]
UBIG_NITEU5.081e-2041.033-demethylubiquinone-9 3-methyltransferase OS=Nitr... [more]
UBIG_NEIMA5.081e-2037.703-demethylubiquinone-9 3-methyltransferase OS=Neis... [more]
UBIG_COXBN5.081e-2036.893-demethylubiquinone-9 3-methyltransferase OS=Coxi... [more]
UBIG_XANAC6.636e-2036.893-demethylubiquinone-9 3-methyltransferase OS=Xant... [more]
UBIG_NEIMB6.636e-2037.703-demethylubiquinone-9 3-methyltransferase OS=Neis... [more]
UBIG_NEIM06.636e-2037.703-demethylubiquinone-9 3-methyltransferase OS=Neis... [more]
UBIG_MARMM6.636e-2036.223-demethylubiquinone-9 3-methyltransferase OS=Mari... [more]
UBIG_PSEU28.667e-2037.703-demethylubiquinone-9 3-methyltransferase OS=Pseu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA01FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873262 ID=FC873262; Name=FC873262; organism=Citrus clementina; type=EST; length=507bp
CATAAATATAATTCCATGGACAGAGAAGCTCGTAGAGGAACAGAGGAAGT
TCGATGCTGTGATTGCTTCAGAGGTAATTGAGCATGTAGCAGATCCTGCT
GAATTCTGCAAGTCTTTGTCTGCATTAACCGTATCTGAGGGAGCTACAGT
GATTTCAACAATAAATCGTTCTGTGAGAGCATATGCAACTGCCATCATTG
CAGCAGAACACATCCTCCATTGGCTTCCAAAAGGTACACATCAGTGGTCA
AGTTTCCTTACTCCCGAAGAGCTCGTGCTAATTCTACAACGTGCTTCCAT
AGATGTTAAAGAGATGGCTGGATTTGTGTACAATCCTTTAACAGGAAGAT
GGTCTCTATCCGATGACATTAGTGTGAACTTCATCGCTTTTGGTACCAAA
AATAGCTAGTAACAGATAAACTCTTCTGTAGTAACACTCTCTCTAATGCA
GCTAATGCTGTGTAATAAATTTTGCTCCCAATCATTTAAAAAAAAAAAAA
AAAAAAA
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