FC873262

Overview
NameFC873262
Unique NameFC873262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_XANC5 (3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ubiG PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.931e-19
Identity = 44/122 (36.07%), Postives = 71/122 (58.20%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E+   FD V   E++EHV DP    ++ ++L    G   +ST+NR+  A+A A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS    VN++A+  K
Sbjct:  117 EQPGSFDTVTCMEMLEHVPDPTAIIRACASLLKPGGKLFLSTLNRTPAAFALAVVGAEYIARLLPKGTHHYKDFIKPAELAAWLRNAGLQLEDVSGMLYEPWRNRARLSSRTEVNYLAYAVK 238          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_XANOR (3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas oryzae pv. oryzae GN=ubiG PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.522e-19
Identity = 44/122 (36.07%), Postives = 71/122 (58.20%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E+   FDAV   E++EHV DP    ++ + L    G   +ST+NR+  A+A A++ AE+I   LP+GTH +  F+ P EL   L+ A + +++++G +Y P   R  LS    VN++A+  K
Sbjct:  117 EQTGSFDAVTCMEMLEHVPDPTAIIRACARLLKPGGKLFLSTLNRTPAAFALAVVGAEYIARLLPRGTHHYKDFIKPAELAAWLRNAELQLEDVSGMLYEPWRNRARLSSRTEVNYLAYAVK 238          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_XANOP (3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ubiG PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.522e-19
Identity = 44/122 (36.07%), Postives = 71/122 (58.20%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E+   FDAV   E++EHV DP    ++ + L    G   +ST+NR+  A+A A++ AE+I   LP+GTH +  F+ P EL   L+ A + +++++G +Y P   R  LS    VN++A+  K
Sbjct:  117 EQTGSFDAVTCMEMLEHVPDPTAIIRACARLLKPGGKLFLSTLNRTPAAFALAVVGAEYIARLLPRGTHHYKDFIKPAELAAWLRNAELQLEDVSGMLYEPWRNRARLSSRTEVNYLAYAVK 238          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_XANOM (3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ubiG PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.522e-19
Identity = 44/122 (36.07%), Postives = 71/122 (58.20%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E+   FDAV   E++EHV DP    ++ + L    G   +ST+NR+  A+A A++ AE+I   LP+GTH +  F+ P EL   L+ A + +++++G +Y P   R  LS    VN++A+  K
Sbjct:  117 EQTGSFDAVTCMEMLEHVPDPTAIIRACARLLKPGGKLFLSTLNRTPAAFALAVVGAEYIARLLPRGTHHYKDFIKPAELAAWLRNAELQLEDVSGMLYEPWRNRARLSSRTEVNYLAYAVK 238          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_XANCP (3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas campestris pv. campestris GN=ubiG PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.522e-19
Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E+   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  A+A A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS    VN++A   K
Sbjct:  117 EQPGSFDAVTCMEMLEHVPDPLAIIRACASLLKPGGTLFLSTLNRTPAAFALAVVGAEYIARLLPKGTHHYKDFIKPSELAAWLRTAELQLQDVSGMLYEPWRNRARLSSRTEVNYLACAVK 238          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_XANCB (3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=ubiG PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.522e-19
Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E+   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  A+A A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS    VN++A   K
Sbjct:  117 EQPGSFDAVTCMEMLEHVPDPLAIIRACASLLKPGGTLFLSTLNRTPAAFALAVVGAEYIARLLPKGTHHYKDFIKPSELAAWLRTAELQLQDVSGMLYEPWRNRARLSSRTEVNYLACAVK 238          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_XANC8 (3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ubiG PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.522e-19
Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 400
            E+   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  A+A A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS    VN++A   K
Sbjct:  117 EQPGSFDAVTCMEMLEHVPDPLAIIRACASLLKPGGTLFLSTLNRTPAAFALAVVGAEYIARLLPKGTHHYKDFIKPSELAAWLRTAELQLQDVSGMLYEPWRNRARLSSRTEVNYLACAVK 238          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_VIBFM (3-demethylubiquinone-9 3-methyltransferase OS=Vibrio fischeri (strain MJ11) GN=ubiG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.302e-19
Identity = 43/121 (35.54%), Postives = 70/121 (57.85%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 397
            E    +D V   E++EHV DP    +S + +    G    ST+NR++++Y  AI+ AE +L  +PKGTH  + F+ P EL+ +L + ++  + + G  YNPLT  +SL  ++ VN+I   T
Sbjct:  113 ENPETYDVVTCMEMLEHVPDPLSVIRSCAKMVKPGGHVFFSTLNRNIKSYLFAIVGAEQLLKLVPKGTHDHNKFIRPSELLKMLDQTALQERGITGLHYNPLTDTYSLGKNVDVNYIVHTT 233          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_VIBF1 (3-demethylubiquinone-9 3-methyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ubiG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.302e-19
Identity = 43/121 (35.54%), Postives = 70/121 (57.85%), Query Frame = 2
Query:   35 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 397
            E    +D V   E++EHV DP    +S + +    G    ST+NR++++Y  AI+ AE +L  +PKGTH  + F+ P EL+ +L + ++  + + G  YNPLT  +SL  ++ VN+I   T
Sbjct:  113 ENPETYDVVTCMEMLEHVPDPLSVIRSCAKMVKPGGHVFFSTLNRNIKSYLFAIVGAEQLLKLVPKGTHDHNKFIRPSELLKMLDQTALQERGITGLHYNPLTDTYSLGKNVDVNYIVHTT 233          
BLAST of FC873262 vs. ExPASy Swiss-Prot
Match: UBIG_BURPS (3-demethylubiquinone-9 3-methyltransferase OS=Burkholderia pseudomallei GN=ubiG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.302e-19
Identity = 43/116 (37.07%), Postives = 69/116 (59.48%), Query Frame = 2
Query:   38 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSVRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 385
            E   +D V   E++EHV  PA    + + L    G    ST+NR++++Y  A+I AE+I   LPKGTH ++ F+ P EL   ++ A + + E+ G  Y+PL  R++LS+D  VN++
Sbjct:  110 EPGAYDVVTCMEMLEHVPSPANIVAACATLVKPGGWVFFSTLNRNLKSYLLAVIGAEYIAQMLPKGTHDYARFIRPSELARFVREAGLQMVEIKGIAYHPLAKRFALSNDTDVNYL 225          
The following BLAST results are available for this feature:
BLAST of FC873262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
UBIG_XANC51.931e-1936.073-demethylubiquinone-9 3-methyltransferase OS=Xant... [more]
UBIG_XANOR2.522e-1936.073-demethylubiquinone-9 3-methyltransferase OS=Xant... [more]
UBIG_XANOP2.522e-1936.073-demethylubiquinone-9 3-methyltransferase OS=Xant... [more]
UBIG_XANOM2.522e-1936.073-demethylubiquinone-9 3-methyltransferase OS=Xant... [more]
UBIG_XANCP2.522e-1936.893-demethylubiquinone-9 3-methyltransferase OS=Xant... [more]
UBIG_XANCB2.522e-1936.893-demethylubiquinone-9 3-methyltransferase OS=Xant... [more]
UBIG_XANC82.522e-1936.893-demethylubiquinone-9 3-methyltransferase OS=Xant... [more]
UBIG_VIBFM4.302e-1935.543-demethylubiquinone-9 3-methyltransferase OS=Vibr... [more]
UBIG_VIBF14.302e-1935.543-demethylubiquinone-9 3-methyltransferase OS=Vibr... [more]
UBIG_BURPS4.302e-1937.073-demethylubiquinone-9 3-methyltransferase OS=Burk... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1BA01FM2 AbsDev Citrus clementina cDNA clone KN0AAI1BA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC873262 ID=FC873262; Name=FC873262; organism=Citrus clementina; type=EST; length=507bp
CATAAATATAATTCCATGGACAGAGAAGCTCGTAGAGGAACAGAGGAAGT
TCGATGCTGTGATTGCTTCAGAGGTAATTGAGCATGTAGCAGATCCTGCT
GAATTCTGCAAGTCTTTGTCTGCATTAACCGTATCTGAGGGAGCTACAGT
GATTTCAACAATAAATCGTTCTGTGAGAGCATATGCAACTGCCATCATTG
CAGCAGAACACATCCTCCATTGGCTTCCAAAAGGTACACATCAGTGGTCA
AGTTTCCTTACTCCCGAAGAGCTCGTGCTAATTCTACAACGTGCTTCCAT
AGATGTTAAAGAGATGGCTGGATTTGTGTACAATCCTTTAACAGGAAGAT
GGTCTCTATCCGATGACATTAGTGTGAACTTCATCGCTTTTGGTACCAAA
AATAGCTAGTAACAGATAAACTCTTCTGTAGTAACACTCTCTCTAATGCA
GCTAATGCTGTGTAATAAATTTTGCTCCCAATCATTTAAAAAAAAAAAAA
AAAAAAA
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